|
1
|
<RESOURCE_PROFILE>
|
|
2
|
<HEADER>
|
|
3
|
<RESOURCE_IDENTIFIER value="a4434d62-d4cd-4c73-a107-bc7c62e6f815_V29ya2Zsb3dEU1Jlc291cmNlcy9Xb3JrZmxvd0RTUmVzb3VyY2VUeXBl"/>
|
|
4
|
<RESOURCE_TYPE value="WorkflowDSResourceType"/>
|
|
5
|
<RESOURCE_KIND value="WorkflowDSResources"/>
|
|
6
|
<RESOURCE_URI value=""/>
|
|
7
|
<DATE_OF_CREATION value="2014-08-01T18:13:51.0Z"/>
|
|
8
|
</HEADER>
|
|
9
|
<BODY>
|
|
10
|
<WORKFLOW_NAME>Data Provision</WORKFLOW_NAME>
|
|
11
|
<WORKFLOW_TYPE>Data Provision</WORKFLOW_TYPE>
|
|
12
|
<WORKFLOW_PRIORITY>30</WORKFLOW_PRIORITY>
|
|
13
|
<CONFIGURATION start="manual">
|
|
14
|
|
|
15
|
<!-- PREPARE NODES -->
|
|
16
|
<NODE name="setInfo" type="SetFormatInfo" isStart="true">
|
|
17
|
<DESCRIPTION>set mdformat, layout, interpretation</DESCRIPTION>
|
|
18
|
<PARAMETERS>
|
|
19
|
<PARAM name="format" type="string" managedBy="user" required="true">DMF</PARAM>
|
|
20
|
<PARAM name="layout" type="string" managedBy="user" required="true">index</PARAM>
|
|
21
|
<PARAM name="interpretation" type="string" managedBy="user" required="true">openaire</PARAM>
|
|
22
|
</PARAMETERS>
|
|
23
|
<ARCS>
|
|
24
|
<ARC to="findIndex"/>
|
|
25
|
</ARCS>
|
|
26
|
</NODE>
|
|
27
|
<NODE name="fetchRelClasses" type="FetchRelClasses" isStart="true">
|
|
28
|
<DESCRIPTION/>
|
|
29
|
<PARAMETERS>
|
|
30
|
<PARAM name="relClassesProperty" type="string" managedBy="system" required="true">dnet.openaire.model.relclasses.xquery</PARAM>
|
|
31
|
<PARAM name="relClassesName" type="string" managedBy="system" required="true">relClasses</PARAM>
|
|
32
|
</PARAMETERS>
|
|
33
|
<ARCS>
|
|
34
|
<ARC to="groupEntities"/>
|
|
35
|
</ARCS>
|
|
36
|
</NODE>
|
|
37
|
<NODE name="fetchContexts" type="LoadContextsJob" isStart="true">
|
|
38
|
<DESCRIPTION/>
|
|
39
|
<PARAMETERS/>
|
|
40
|
<ARCS>
|
|
41
|
<ARC to="groupEntities"/>
|
|
42
|
</ARCS>
|
|
43
|
</NODE>
|
|
44
|
<NODE name="fetchEntityLinks" type="LoadEntityLinksJob" isStart="true">
|
|
45
|
<DESCRIPTION/>
|
|
46
|
<PARAMETERS/>
|
|
47
|
<ARCS>
|
|
48
|
<ARC to="groupEntities"/>
|
|
49
|
</ARCS>
|
|
50
|
</NODE>
|
|
51
|
|
|
52
|
<!-- UPDATE INDEX -->
|
|
53
|
<NODE name="findIndex" type="FindIndex">
|
|
54
|
<DESCRIPTION/>
|
|
55
|
<PARAMETERS/>
|
|
56
|
<ARCS>
|
|
57
|
<ARC name="found" to="prepareIndexing"/>
|
|
58
|
<ARC name="notFound" to="createIndex"/>
|
|
59
|
</ARCS>
|
|
60
|
</NODE>
|
|
61
|
<NODE name="createIndex" type="CreateIndex">
|
|
62
|
<DESCRIPTION/>
|
|
63
|
<PARAMETERS/>
|
|
64
|
<ARCS>
|
|
65
|
<ARC to="prepareIndexing"/>
|
|
66
|
</ARCS>
|
|
67
|
</NODE>
|
|
68
|
<NODE name="prepareIndexing" type="PrepareIndexJob">
|
|
69
|
<DESCRIPTION>Prepare indexing</DESCRIPTION>
|
|
70
|
<PARAMETERS>
|
|
71
|
<PARAM name="outputRecordsPathParam" type="string" managedBy="system" required="true">hdfsRecordsPath</PARAM>
|
|
72
|
<PARAM name="rottenRecordsPathParam" type="string" managedBy="system" required="true">rottenRecordsPath</PARAM>
|
|
73
|
<PARAM name="layoutToRecordStylesheet" type="string" managedBy="system" required="true">/eu/dnetlib/msro/openaireplus/workflows/index/openaireLayoutToRecordStylesheet.xsl</PARAM>
|
|
74
|
<PARAM name="oafSchemaLocationProperty" type="string" managedBy="system" required="true">oaf.schema.location</PARAM>
|
|
75
|
</PARAMETERS>
|
|
76
|
<ARCS>
|
|
77
|
<ARC to="cleanupXml"/>
|
|
78
|
<ARC to="cleanupRotten"/>
|
|
79
|
</ARCS>
|
|
80
|
</NODE>
|
|
81
|
<NODE name="cleanupXml" type="DeleteHdfsPathJob">
|
|
82
|
<DESCRIPTION>hdfs cleanup (xml)</DESCRIPTION>
|
|
83
|
<PARAMETERS>
|
|
84
|
<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
|
|
85
|
<PARAM required="true" type="string" name="envParams" managedBy="system">
|
|
86
|
{
|
|
87
|
'path' : 'hdfsRecordsPath'
|
|
88
|
}
|
|
89
|
</PARAM>
|
|
90
|
</PARAMETERS>
|
|
91
|
<ARCS>
|
|
92
|
<ARC to="groupEntities"/>
|
|
93
|
</ARCS>
|
|
94
|
</NODE>
|
|
95
|
<NODE name="cleanupRotten" type="DeleteHdfsPathJob">
|
|
96
|
<DESCRIPTION>hdfs cleanup (rotten)</DESCRIPTION>
|
|
97
|
<PARAMETERS>
|
|
98
|
<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
|
|
99
|
<PARAM required="true" type="string" name="envParams" managedBy="system">
|
|
100
|
{
|
|
101
|
'path' : 'rottenRecordsPath'
|
|
102
|
}
|
|
103
|
</PARAM>
|
|
104
|
</PARAMETERS>
|
|
105
|
<ARCS>
|
|
106
|
<ARC to="groupEntities"/>
|
|
107
|
</ARCS>
|
|
108
|
</NODE>
|
|
109
|
<NODE name="groupEntities" type="SubmitHadoopJob" isJoin="true">
|
|
110
|
<DESCRIPTION>M/R group entities</DESCRIPTION>
|
|
111
|
<PARAMETERS>
|
|
112
|
<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
|
|
113
|
<PARAM required="true" type="string" name="hadoopJob" managedBy="system">prepareIndexDataJob</PARAM>
|
|
114
|
<PARAM required="true" type="string" name="sysParams" managedBy="system">
|
|
115
|
{
|
|
116
|
'hbase.mapred.inputtable' : 'hbase.mapred.datatable',
|
|
117
|
'hbase.mapreduce.inputtable' : 'hbase.mapred.datatable'
|
|
118
|
}
|
|
119
|
</PARAM>
|
|
120
|
<PARAM required="true" type="string" name="envParams" managedBy="system">
|
|
121
|
{
|
|
122
|
'mapred.output.dir' : 'hdfsRecordsPath',
|
|
123
|
'index.entity.links' : 'index.entity.links',
|
|
124
|
'oaf.schema.location' : 'oaf.schema.location',
|
|
125
|
'contextmap' : 'contextmap',
|
|
126
|
'relClasses' : 'relClasses'
|
|
127
|
}
|
|
128
|
</PARAM>
|
|
129
|
<PARAM required="true" type="boolean" name="simulation" managedBy="user">false</PARAM>
|
|
130
|
</PARAMETERS>
|
|
131
|
<ARCS>
|
|
132
|
<ARC to="updateIndex"/>
|
|
133
|
<ARC to="setOAIFormat"/>
|
|
134
|
<ARC to="prepareStats"/>
|
|
135
|
</ARCS>
|
|
136
|
</NODE>
|
|
137
|
<NODE name="updateIndex" type="SubmitHadoopJob">
|
|
138
|
<DESCRIPTION>M/O index records</DESCRIPTION>
|
|
139
|
<PARAMETERS>
|
|
140
|
<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
|
|
141
|
<PARAM required="true" type="string" name="hadoopJob" managedBy="system">indexFeedJob</PARAM>
|
|
142
|
<PARAM required="true" type="string" name="envParams" managedBy="system">
|
|
143
|
{
|
|
144
|
'mapred.input.dir' : 'hdfsRecordsPath',
|
|
145
|
'mapred.output.dir' : 'rottenRecordsPath',
|
|
146
|
'index.xslt' : 'index.xslt',
|
|
147
|
'index.solr.url' : 'index.solr.url',
|
|
148
|
'index.solr.collection' : 'index.solr.collection',
|
|
149
|
'index.buffer.flush.threshold' : 'index.buffer.flush.threshold',
|
|
150
|
'index.shutdown.wait.time' : 'index.shutdown.wait.time',
|
|
151
|
'index.solr.sim.mode' : 'index.solr.sim.mode',
|
|
152
|
'index.feed.timestamp' : 'index.feed.timestamp'
|
|
153
|
}
|
|
154
|
</PARAM>
|
|
155
|
<PARAM required="true" type="boolean" name="simulation" managedBy="user">false</PARAM>
|
|
156
|
</PARAMETERS>
|
|
157
|
<ARCS>
|
|
158
|
<ARC to="finalize"/>
|
|
159
|
</ARCS>
|
|
160
|
</NODE>
|
|
161
|
<NODE name="finalize" type="FinalizeIndexFeeding">
|
|
162
|
<DESCRIPTION>commit changes</DESCRIPTION>
|
|
163
|
<PARAMETERS/>
|
|
164
|
<ARCS>
|
|
165
|
<ARC to="updateDs"/>
|
|
166
|
</ARCS>
|
|
167
|
</NODE>
|
|
168
|
<NODE name="updateDs" type="IndexDsUpdateJob">
|
|
169
|
<DESCRIPTION>update DS</DESCRIPTION>
|
|
170
|
<PARAMETERS/>
|
|
171
|
<ARCS>
|
|
172
|
<ARC to="waitAll"/>
|
|
173
|
</ARCS>
|
|
174
|
</NODE>
|
|
175
|
|
|
176
|
<!-- UPDATE STATS -->
|
|
177
|
<NODE name="prepareStats" type="PrepareStatsParams">
|
|
178
|
<DESCRIPTION>set params for stats</DESCRIPTION>
|
|
179
|
<PARAMETERS/>
|
|
180
|
<ARCS>
|
|
181
|
<ARC to="updateStats"/>
|
|
182
|
</ARCS>
|
|
183
|
</NODE>
|
|
184
|
<NODE name="updateStats" type="SubmitHadoopJob">
|
|
185
|
<DESCRIPTION>Update stats DB</DESCRIPTION>
|
|
186
|
<PARAMETERS>
|
|
187
|
<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
|
|
188
|
<PARAM required="true" type="string" name="hadoopJob" managedBy="system">StatsExportJob</PARAM>
|
|
189
|
<PARAM required="true" type="string" name="sysParams" managedBy="system">
|
|
190
|
{
|
|
191
|
'Stats_Hbase_Source_Table' : 'hbase.mapred.datatable'
|
|
192
|
}
|
|
193
|
</PARAM>
|
|
194
|
<PARAM required="true" type="string" name="envParams" managedBy="system">
|
|
195
|
{
|
|
196
|
'nameNode' : 'nameNode',
|
|
197
|
'jobTracker' : 'jobTracker',
|
|
198
|
'isLookupEndpoint' : 'isLookupEndpoint',
|
|
199
|
'Stats_indexConf' : 'index.entity.links'
|
|
200
|
}
|
|
201
|
</PARAM>
|
|
202
|
<PARAM required="true" type="boolean" name="simulation" managedBy="user">false</PARAM>
|
|
203
|
</PARAMETERS>
|
|
204
|
<ARCS>
|
|
205
|
<ARC to="waitAll"/>
|
|
206
|
</ARCS>
|
|
207
|
</NODE>
|
|
208
|
|
|
209
|
<!-- OAI STORE UPDATE -->
|
|
210
|
<NODE name="setOAIFormat" type="SetFormatInfo">
|
|
211
|
<DESCRIPTION>set format, layout, interpretation for OAI publisher</DESCRIPTION>
|
|
212
|
<PARAMETERS>
|
|
213
|
<PARAM name="format" type="string" managedBy="user" required="true">oaf</PARAM>
|
|
214
|
<PARAM name="layout" type="string" managedBy="user" required="true">index</PARAM>
|
|
215
|
<PARAM name="interpretation" type="string" managedBy="user" required="true">openaire</PARAM>
|
|
216
|
<PARAM name="formatParam" type="string" managedBy="system" required="true">oai_format</PARAM>
|
|
217
|
<PARAM name="layoutParam" type="string" managedBy="system" required="true">oai_layout</PARAM>
|
|
218
|
<PARAM name="interpretationParam" type="string" managedBy="system" required="true">oai_interpretation</PARAM>
|
|
219
|
</PARAMETERS>
|
|
220
|
<ARCS>
|
|
221
|
<ARC to="prepareOAI"/>
|
|
222
|
</ARCS>
|
|
223
|
</NODE>
|
|
224
|
<NODE name="prepareOAI" type="PrepareOaiJob">
|
|
225
|
<DESCRIPTION>Prepare params for OAI store feeding</DESCRIPTION>
|
|
226
|
<PARAMETERS>
|
|
227
|
<PARAM name="oaiStoreCollectionParam" type="string" managedBy="system" required="true">oaiStoreCollection</PARAM>
|
|
228
|
<PARAM name="oaiDBName" type="string" managedBy="user" required="true">oaistore</PARAM>
|
|
229
|
<PARAM name="oaiDBNameParam" type="string" managedBy="system" required="true">oai_dbName</PARAM>
|
|
230
|
<PARAM name="formatParam" type="string" managedBy="system" required="true">oai_format</PARAM>
|
|
231
|
<PARAM name="layoutParam" type="string" managedBy="system" required="true">oai_layout</PARAM>
|
|
232
|
<PARAM name="interpretationParam" type="string" managedBy="system" required="true">oai_interpretation</PARAM>
|
|
233
|
<PARAM name="skipDuplicates" type="boolean" managedBy="user" required="true">true</PARAM>
|
|
234
|
<PARAM name="duplicateXPath" type="string" managedBy="user" required="true">//*[local-name()='entity']//*[local-name()='datainfo']/*[local-name()='deletedbyinference'][./text() = 'true']</PARAM>
|
|
235
|
</PARAMETERS>
|
|
236
|
<ARCS>
|
|
237
|
<ARC to="OAIDropStore"/>
|
|
238
|
</ARCS>
|
|
239
|
</NODE>
|
|
240
|
<NODE name="OAIDropStore" type="OAIDropStore">
|
|
241
|
<DESCRIPTION>Drop the store: upserts are too expensive!</DESCRIPTION>
|
|
242
|
<PARAMETERS>
|
|
243
|
<PARAM name="dbNameParam" required="true" type="string" managedBy="system">oai_dbName</PARAM>
|
|
244
|
<PARAM name="formatParam" type="string" managedBy="system" required="true">oai_format</PARAM>
|
|
245
|
<PARAM name="layoutParam" type="string" managedBy="system" required="true">oai_layout</PARAM>
|
|
246
|
<PARAM name="interpretationParam" type="string" managedBy="system" required="true">oai_interpretation</PARAM>
|
|
247
|
</PARAMETERS>
|
|
248
|
<ARCS>
|
|
249
|
<ARC to="OAICreateStore"/>
|
|
250
|
</ARCS>
|
|
251
|
</NODE>
|
|
252
|
<NODE name="OAICreateStore" type="OAICreateStore">
|
|
253
|
<DESCRIPTION/>
|
|
254
|
<PARAMETERS>
|
|
255
|
<PARAM name="dbNameParam" required="true" type="string" managedBy="system">oai_dbName</PARAM>
|
|
256
|
<PARAM name="formatParam" type="string" managedBy="system" required="true">oai_format</PARAM>
|
|
257
|
<PARAM name="layoutParam" type="string" managedBy="system" required="true">oai_layout</PARAM>
|
|
258
|
<PARAM name="interpretationParam" type="string" managedBy="system" required="true">oai_interpretation</PARAM>
|
|
259
|
</PARAMETERS>
|
|
260
|
<ARCS>
|
|
261
|
<ARC to="feedOAI"/>
|
|
262
|
</ARCS>
|
|
263
|
</NODE>
|
|
264
|
<NODE name="feedOAI" type="SubmitHadoopJob">
|
|
265
|
<DESCRIPTION>M/O oai feeding</DESCRIPTION>
|
|
266
|
<PARAMETERS>
|
|
267
|
<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
|
|
268
|
<PARAM required="true" type="string" name="hadoopJob" managedBy="system">oaiFeedJob</PARAM>
|
|
269
|
<PARAM required="true" type="string" name="envParams" managedBy="system">
|
|
270
|
{
|
|
271
|
'mapred.input.dir' : 'hdfsRecordsPath',
|
|
272
|
'services.publisher.oai.collection' : 'oaiStoreCollection',
|
|
273
|
'oaiConfiguration' : 'oaiConfiguration',
|
|
274
|
'oai.feed.date' : 'oai.feed.date',
|
|
275
|
'services.publisher.oai.db' : 'oai_dbName',
|
|
276
|
'services.publisher.oai.skipDuplicates':'services.publisher.oai.skipDuplicates',
|
|
277
|
'services.publisher.oai.duplicateXPath':'services.publisher.oai.duplicateXPath'
|
|
278
|
}
|
|
279
|
</PARAM>
|
|
280
|
<PARAM required="true" type="string" name="sysParams" managedBy="system">
|
|
281
|
{
|
|
282
|
'services.publisher.oai.host' : 'services.publisher.oai.host',
|
|
283
|
'services.publisher.oai.port' : 'services.publisher.oai.port'
|
|
284
|
}
|
|
285
|
</PARAM>
|
|
286
|
<PARAM required="true" type="boolean" name="simulation" managedBy="user">false</PARAM>
|
|
287
|
</PARAMETERS>
|
|
288
|
<ARCS>
|
|
289
|
<ARC to="CompoundIndexes"/>
|
|
290
|
</ARCS>
|
|
291
|
</NODE>
|
|
292
|
<NODE name="CompoundIndexes" type="OAICreateIndex">
|
|
293
|
<DESCRIPTION>Create composite indexes for the OAI store</DESCRIPTION>
|
|
294
|
<PARAMETERS>
|
|
295
|
<PARAM name="dbNameParam" required="true" type="string" managedBy="system">oai_dbName</PARAM>
|
|
296
|
<PARAM name="oaiStoreCollectionParam" type="string" managedBy="system" required="true">oaiStoreCollection</PARAM>
|
|
297
|
<PARAM required="true" type="string" name="fieldNames" managedBy="user">set,datestamp;license,oaftype;set,oaftype;oaftype,funder;resulttypeid,oaftype</PARAM>
|
|
298
|
</PARAMETERS>
|
|
299
|
<ARCS>
|
|
300
|
<ARC to="ConfigIndexes"/>
|
|
301
|
</ARCS>
|
|
302
|
</NODE>
|
|
303
|
<NODE name="ConfigIndexes" type="OAIEnsureIndexes">
|
|
304
|
<DESCRIPTION>Ensure an index exists on fields as specified in the configuration profile</DESCRIPTION>
|
|
305
|
<PARAMETERS>
|
|
306
|
<PARAM name="dbNameParam" required="true" type="string" managedBy="system">oai_dbName</PARAM>
|
|
307
|
<PARAM name="oaiStoreCollectionParam" type="string" managedBy="system" required="true">oaiStoreCollection</PARAM>
|
|
308
|
</PARAMETERS>
|
|
309
|
<ARCS>
|
|
310
|
<ARC to="SetsCount"/>
|
|
311
|
<ARC to="ConfigSets"/>
|
|
312
|
</ARCS>
|
|
313
|
</NODE>
|
|
314
|
<NODE name="SetsCount" type="OAISetsCountUpdate">
|
|
315
|
<DESCRIPTION>Count records in each OAI set, for each exported metadata format</DESCRIPTION>
|
|
316
|
<PARAMETERS>
|
|
317
|
<PARAM name="dbNameParam" required="true" type="string" managedBy="system">oai_dbName</PARAM>
|
|
318
|
<PARAM name="oaiStoreCollectionParam" type="string" managedBy="system" required="true">oaiStoreCollection</PARAM>
|
|
319
|
<PARAM name="configuredOnly" type="boolean" managedBy="user" required="true">false</PARAM>
|
|
320
|
</PARAMETERS>
|
|
321
|
<ARCS>
|
|
322
|
<ARC to="waitAll"/>
|
|
323
|
</ARCS>
|
|
324
|
</NODE>
|
|
325
|
<NODE name="ConfigSets" type="RefreshSetsFromConfig">
|
|
326
|
<DESCRIPTION>Reads the current OAI configuration and upsert OAI sets accordingly (counts are updated as well)</DESCRIPTION>
|
|
327
|
<PARAMETERS>
|
|
328
|
<PARAM name="dbNameParam" required="true" type="string" managedBy="system">oai_dbName</PARAM>
|
|
329
|
</PARAMETERS>
|
|
330
|
<ARCS>
|
|
331
|
<ARC to="waitAll"/>
|
|
332
|
</ARCS>
|
|
333
|
</NODE>
|
|
334
|
|
|
335
|
<!-- WAIT FOR ALL THE WF BRANCHES TO COMPLETE -->
|
|
336
|
<NODE name="waitAll" isJoin="true">
|
|
337
|
<DESCRIPTION>wait for all the branches to complete</DESCRIPTION>
|
|
338
|
<PARAMETERS/>
|
|
339
|
<ARCS>
|
|
340
|
<ARC to="success"/>
|
|
341
|
</ARCS>
|
|
342
|
</NODE>
|
|
343
|
</CONFIGURATION>
|
|
344
|
<STATUS>
|
|
345
|
</STATUS>
|
|
346
|
</BODY>
|
|
347
|
</RESOURCE_PROFILE>
|