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package eu.dnetlib.data.claims.migration.parser;
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import eu.dnetlib.data.claims.migration.entity.Result;
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import eu.dnetlib.data.claimsDemo.ClaimUtils;
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import org.apache.log4j.BasicConfigurator;
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import org.junit.Assert;
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import org.junit.Before;
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import org.junit.Test;
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/**
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* Created by kiatrop on 23/2/2016.
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*/
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public class ExternalParserTest {
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@Before
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public void init() throws Exception {
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BasicConfigurator.configure();
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}
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private String crossrefJson = "{\"status\":\"ok\",\"message-type\":\"work-list\",\"message-version\":\"1.0.0\",\"message\":" +
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"{\"query\":{\"search-terms\":null,\"start-index\":0},\"items-per-page\":20,\"items\":[{\"indexed\":" +
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"{\"date-parts\":[[2015,12,28]], \"date-time\":\"2015-12-28T17:45:59Z\",\"timestamp\":1451324759779}," +
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"\"reference-count\":0,\"publisher\":\"Society for Neuroscience\", \"issue\":\"17\"," +
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"\"published-print\":{\"date-parts\":[[2012,4,25]]},\"DOI\":\"10.1523\\/jneurosci.2900-11.2012\"," +
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"\"type\":\"journal-article\",\"created\": {\"date-parts\":[[2012,4,25]]," +
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"\"date-time\":\"2012-04-25T16:38:54Z\",\"timestamp\":1335371934000},\"page\":\"5728-5736\"," +
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"\"source\":\"CrossRef\",\"title\":[\"Imaging Microglial\\/Macrophage Activation in Spinal Cords of " +
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"Experimental Autoimmune Encephalomyelitis Rats by Positron Emission Tomography Using the Mitochondrial " +
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"18 kDa Translocator Protein Radioligand [18F]DPA-714\"]," +
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"\"prefix\":\"http:\\/\\/id.crossref.org\\/prefix\\/10.1523\",\"volume\":\"32\",\"author\":" +
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"[{\"affiliation\":[],\"family\":\"Abourbeh\",\"given\":\"G.\"},{\"affiliation\":[],\"family\":\"Theze\"," +
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"\"given\":\"B.\"},{\"affiliation\":[],\"family\":\"Maroy\",\"given\":\"R.\"},{\"affiliation\":[],\"family\":" +
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"\"Dubois\",\"given\":\"A.\"},{\"affiliation\":[],\"family\":\"Brulon\",\"given\":\"V.\"}," +
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"{\"affiliation\":[],\"family\":\"Fontyn\",\"given\":\"Y.\"},{\"affiliation\":[],\"family\":\"Dolle\"," +
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"\"given\":\"F.\"},{\"affiliation\":[],\"family\":\"Tavitian\",\"given\":\"B.\"},{\"affiliation\":[]," +
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"\"family\":\"Boisgard\",\"given\":\"R.\"}],\"member\":\"http:\\/\\/id.crossref.org\\/member\\/393\"," +
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"\"published-online\":{\"date-parts\":[[2012,4,25]]},\"container-title\":[\"Journal of Neuroscience\"]," +
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"\"deposited\":{\"date-parts\":[[2014,2,27]],\"date-time\":\"2014-02-27T06:42:02Z\",\"timestamp\":1393483322000}," +
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"\"score\":1.0,\"subtitle\":[],\"issued\":{\"date-parts\":[[2012,4,25]]}," +
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"\"URL\":\"http:\\/\\/dx.doi.org\\/10.1523\\/jneurosci.2900-11.2012\",\"ISSN\":[\"0270-6474\",\"1529-2401\"]," +
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"\"subject\":[\"Neuroscience(all)\"]}],\"total-results\":1,\"facets\":{}}}" +
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"";
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@Test
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public void crossref2ResultTest(){
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Result result = ExternalRecordParser.crossref2Result(crossrefJson);
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Assert.assertNull(result.getAccessRights());
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Assert.assertNull(result.getBestLicense());
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Assert.assertEquals("openaire____::crossref", result.getCollectedFrom());
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Assert.assertEquals("10.1523/jneurosci.2900-11.2012", result.getDoi());
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Assert.assertNull(result.getOai());
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Assert.assertNotNull(result.getOpenaireId());// Assert.assertNull(result.getOpenaireId());
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Assert.assertNull(result.getPmcid());
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Assert.assertEquals(ClaimUtils.PUBLICATION, result.getResultType());
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Assert.assertEquals("Imaging Microglial/Macrophage Activation in Spinal Cords of Experimental Autoimmune Encephalomyelitis Rats by Positron Emission Tomography Using the Mitochondrial 18 kDa Translocator Protein Radioligand [18F]DPA-714", result.getTitle());
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Assert.assertEquals("json", result.getRecordFormat());
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Assert.assertEquals("https://dx.doi.org/10.1523/jneurosci.2900-11.2012", result.getExternalUrl());
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Assert.assertNull(result.getEmbargoEndDate());
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Assert.assertNull(result.getOrcidworkid());
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Assert.assertEquals(9, result.getAuthors().size());
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Assert.assertEquals("G. Abourbeh", result.getAuthors().get(0+""));
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Assert.assertEquals("Y. Fontyn", result.getAuthors().get(5+""));
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}
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private String orcidXml = "<orcid-message xmlns=\"http://www.orcid.org/ns/orcid\">\n" +
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" <message-version>1.1</message-version>\n" +
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" <orcid-profile type=\"user\">\n" +
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" <orcid-identifier>\n" +
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" <uri>http://orcid.org/0000-0002-9414-646X</uri>\n" +
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" <path>0000-0002-9414-646X</path>\n" +
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" <host>orcid.org</host>\n" +
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" </orcid-identifier>\n" +
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" <orcid-preferences>\n" +
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" <locale>es</locale>\n" +
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" </orcid-preferences>\n" +
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" <orcid-history>\n" +
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" <creation-method>website</creation-method>\n" +
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" <completion-date>2013-01-11T14:07:54.194Z</completion-date>\n" +
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" <submission-date>2013-01-11T13:27:46.558Z</submission-date>\n" +
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" <last-modified-date>2016-01-27T16:06:13.543Z</last-modified-date>\n" +
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" <claimed>true</claimed>\n" +
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" </orcid-history>\n" +
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" <orcid-activities>\n" +
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" <orcid-works>\n" +
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" <orcid-work put-code=\"21755327\" visibility=\"public\">\n" +
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" <work-title>\n" +
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" <title>Providing Ubiquitous Positioning in Outdoor Environments</title>\n" +
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" </work-title>\n" +
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" <journal-title>2015 IEEE International Conference on Systems, Man, and Cybernetics</journal-title>\n" +
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" <work-citation>\n" +
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" <work-citation-type>bibtex</work-citation-type>\n" +
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" <citation>@inproceedings{Moreno_2015,doi = {10.1109/smc.2015.229},url = {http://dx.doi.org/10.1109/smc.2015.229},year = 2015,month = {oct},publisher = {Institute of Electrical {\\&} Electronics Engineers ({IEEE})},author = {Daniel Moreno and Sergio F. Ochoa and Roc Meseguer},title = {Providing Ubiquitous Positioning in Outdoor Environments},booktitle = {2015 {IEEE} International Conference on Systems, Man, and Cybernetics}}</citation>\n" +
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" </work-citation>\n" +
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" <work-type>conference-paper</work-type>\n" +
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" <publication-date>\n" +
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" <year>2015</year>\n" +
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" <month>10</month>\n" +
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" </publication-date>\n" +
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" <work-external-identifiers>\n" +
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" <work-external-identifier>\n" +
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" <work-external-identifier-type>doi</work-external-identifier-type>\n" +
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" <work-external-identifier-id>10.1109/smc.2015.229</work-external-identifier-id>\n" +
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" </work-external-identifier>\n" +
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" </work-external-identifiers>\n" +
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" <work-contributors>\n" +
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" <contributor>\n" +
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" <credit-name visibility=\"public\">Daniel Moreno</credit-name>\n" +
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" <contributor-attributes>\n" +
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" <contributor-role>author</contributor-role>\n" +
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" </contributor-attributes>\n" +
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" </contributor>\n" +
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" <contributor>\n" +
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" <credit-name visibility=\"public\">Sergio F. Ochoa</credit-name>\n" +
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" <contributor-attributes>\n" +
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" <contributor-role>author</contributor-role>\n" +
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" </contributor-attributes>\n" +
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" </contributor>\n" +
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" <contributor>\n" +
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" <credit-name visibility=\"public\">Roc Meseguer</credit-name>\n" +
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" <contributor-attributes>\n" +
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" <contributor-role>author</contributor-role>\n" +
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" </contributor-attributes>\n" +
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" </contributor>\n" +
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" </work-contributors>\n" +
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" <work-source>\n" +
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" <uri>http://orcid.org/0000-0002-3054-1567</uri>\n" +
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" <path>0000-0002-3054-1567</path>\n" +
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" <host>orcid.org</host>\n" +
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" </work-source>\n" +
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" </orcid-work>\n" +
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" <orcid-work put-code=\"19191618\" visibility=\"public\">\n" +
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" <work-title>\n" +
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" <title>A Context-Aware Model to Provide Positioning in Disaster Relief Scenarios</title>\n" +
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" </work-title>\n" +
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" <journal-title>Sensors</journal-title>\n" +
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" <work-citation>\n" +
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" <work-citation-type>bibtex</work-citation-type>\n" +
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" <citation>@article{Moreno_2015,doi = {10.3390/s151025176},url = {http://dx.doi.org/10.3390/s151025176},year = 2015,month = {sep},publisher = {{MDPI} {AG}},volume = {15},number = {10},pages = {25176--25207},author = {Daniel Moreno and Sergio Ochoa and Roc Meseguer},title = {A Context-Aware Model to Provide Positioning in Disaster Relief Scenarios},journal = {Sensors}}</citation>\n" +
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" </work-citation>\n" +
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" <work-type>journal-article</work-type>\n" +
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" <publication-date>\n" +
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" <year>2015</year>\n" +
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" <month>09</month>\n" +
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" </publication-date>\n" +
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" <work-external-identifiers>\n" +
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" <work-external-identifier>\n" +
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" <work-external-identifier-type>doi</work-external-identifier-type>\n" +
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" <work-external-identifier-id>10.3390/s151025176</work-external-identifier-id>\n" +
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" </work-external-identifier>\n" +
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" </work-external-identifiers>\n" +
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" <work-contributors>\n" +
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" <contributor>\n" +
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" <credit-name visibility=\"public\">Daniel Moreno</credit-name>\n" +
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" <contributor-attributes>\n" +
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" <contributor-role>author</contributor-role>\n" +
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" </contributor-attributes>\n" +
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" </contributor>\n" +
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" <contributor>\n" +
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" <credit-name visibility=\"public\">Sergio Ochoa</credit-name>\n" +
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" <contributor-attributes>\n" +
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" <contributor-role>author</contributor-role>\n" +
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" </contributor-attributes>\n" +
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" </contributor>\n" +
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" <contributor>\n" +
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" <credit-name visibility=\"public\">Roc Meseguer</credit-name>\n" +
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" <contributor-attributes>\n" +
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" <contributor-role>author</contributor-role>\n" +
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" </contributor-attributes>\n" +
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" </contributor>\n" +
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" </work-contributors>\n" +
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" <work-source>\n" +
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" <uri>http://orcid.org/0000-0002-3054-1567</uri>\n" +
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" <path>0000-0002-3054-1567</path>\n" +
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" <host>orcid.org</host>\n" +
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" </work-source>\n" +
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" </orcid-work>" +
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"</orcid-works></orcid-activities></orcid-profile></orcid-message>";
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@Test
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public void orcid2ResultTest() {
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Result result = ExternalRecordParser.orcid2Result(orcidXml, "0000-0002-9414-646X-21755327");
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Assert.assertNull(result.getAccessRights());
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Assert.assertNull(result.getBestLicense());
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Assert.assertEquals("openaire____::orcid", result.getCollectedFrom());
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Assert.assertEquals("10.1109/smc.2015.229", result.getDoi());
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Assert.assertEquals("0000-0002-9414-646X-21755327", result.getOrcidworkid());
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Assert.assertNull(result.getOai());
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Assert.assertNotNull(result.getOpenaireId());// Assert.assertNull(result.getOpenaireId());
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Assert.assertNull(result.getPmcid());
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Assert.assertEquals(ClaimUtils.PUBLICATION, result.getResultType());
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Assert.assertEquals("Providing Ubiquitous Positioning in Outdoor Environments", result.getTitle());
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Assert.assertEquals("xml", result.getRecordFormat());
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Assert.assertEquals("https://dx.doi.org/10.1109/smc.2015.229", result.getExternalUrl());
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Assert.assertNull(result.getEmbargoEndDate());
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}
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private String dataciteXml = "<rdf:RDF\n" +
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" xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\"\n" +
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" xmlns:owl=\"http://www.w3.org/2002/07/owl#\"\n" +
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" xmlns:j.0=\"http://purl.org/dc/terms/\" > \n" +
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" <rdf:Description rdf:about=\"http://dx.doi.org/10.5060/D4RN35SD/USGS85K1_041\">\n" +
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" <j.0:creator>Krimmel, Robert</j.0:creator>\n" +
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" <j.0:publisher>National Snow and Ice Data Center/World Data Center for Glaciology, Boulder</j.0:publisher>\n" +
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" <j.0:title>Chocolate Glacier</j.0:title>\n" +
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" <j.0:date>2008</j.0:date>\n" +
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" <owl:sameAs>doi:10.5060/D4RN35SD/USGS85K1_041</owl:sameAs>\n" +
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" <owl:sameAs>info:doi/10.5060/D4RN35SD/USGS85K1_041</owl:sameAs>\n" +
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" <j.0:identifier>10.5060/D4RN35SD/USGS85K1_041</j.0:identifier>\n" +
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" </rdf:Description>\n" +
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"</rdf:RDF>\n";
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218
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private String dataciteJson = "{\"data\":{\"id\":\"https://doi.org/10.5281/ZENODO.54730\",\"type\":\"works\",\"attributes\":{\"doi\":\"10.5281/ZENODO.54730\",\"url\":null,\"author\":[{\"family\":\"Manola\",\"given\":\"Natalia\"}],\"title\":\"From Open Access to Open Science\",\"container-title\":\"Zenodo\",\"description\":\"Presentation given at the PASTEUR4OA conference - Green Light for Open Access: Aligning Europe’s OA Policies, Amsterdam, 17th-18th May 2016.\",\"resource-type-subtype\":\"Presentation\",\"data-center-id\":\"cern.zenodo\",\"member-id\":\"cern\",\"resource-type-id\":\"text\",\"version\":null,\"license\":\"https://creativecommons.org/licenses/by/4.0/\",\"schema-version\":\"3\",\"results\":[],\"related-identifiers\":[],\"published\":\"2016\",\"deposited\":\"2016-06-03T17:03:51Z\",\"updated\":\"2016-06-03T17:03:51Z\",\"media\":null,\"xml\":\"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\"},\"relationships\":{\"data-center\":{\"meta\":{}},\"member\":{\"meta\":{}},\"resource-type\":{\"meta\":{}}}}}";
|
|
219
|
|
|
220
|
@Test
|
|
221
|
public void datacite2ResultTest() {
|
|
222
|
Result result = ExternalRecordParser.datacite2Result(dataciteXml);
|
|
223
|
|
|
224
|
Assert.assertNull(result.getAccessRights());
|
|
225
|
Assert.assertNull(result.getBestLicense());
|
|
226
|
Assert.assertEquals("openaire____::datacite", result.getCollectedFrom());
|
|
227
|
Assert.assertEquals("10.5060/D4RN35SD/USGS85K1_041", result.getDoi());
|
|
228
|
Assert.assertNull(result.getOrcidworkid());
|
|
229
|
Assert.assertNull(result.getOai());
|
|
230
|
Assert.assertNotNull(result.getOpenaireId());// Assert.assertNull(result.getOpenaireId());
|
|
231
|
Assert.assertNull(result.getPmcid());
|
|
232
|
Assert.assertEquals(ClaimUtils.DATASET, result.getResultType());
|
|
233
|
Assert.assertEquals("Chocolate Glacier", result.getTitle());
|
|
234
|
Assert.assertEquals("xml", result.getRecordFormat());
|
|
235
|
Assert.assertEquals("http://dx.doi.org/10.5060/D4RN35SD/USGS85K1_041", result.getExternalUrl());
|
|
236
|
Assert.assertNull(result.getEmbargoEndDate());
|
|
237
|
|
|
238
|
}
|
|
239
|
|
|
240
|
@Test
|
|
241
|
public void dataciteJsonResultTest() {
|
|
242
|
Result result = ExternalRecordParser.dataciteJson2Result(dataciteJson);
|
|
243
|
|
|
244
|
Assert.assertNull(result.getAccessRights());
|
|
245
|
Assert.assertNull(result.getBestLicense());
|
|
246
|
Assert.assertEquals("openaire____::datacite", result.getCollectedFrom());
|
|
247
|
Assert.assertEquals("10.5281/ZENODO.54730", result.getDoi());
|
|
248
|
Assert.assertNull(result.getOrcidworkid());
|
|
249
|
Assert.assertNull(result.getOai());
|
|
250
|
Assert.assertNotNull(result.getOpenaireId());// Assert.assertNull(result.getOpenaireId());
|
|
251
|
Assert.assertNull(result.getPmcid());
|
|
252
|
Assert.assertEquals(ClaimUtils.DATASET, result.getResultType());
|
|
253
|
Assert.assertEquals("From Open Access to Open Science", result.getTitle());
|
|
254
|
Assert.assertEquals("json", result.getRecordFormat());
|
|
255
|
Assert.assertEquals("https://dx.doi.org/10.5281/ZENODO.54730", result.getExternalUrl());
|
|
256
|
Assert.assertNull(result.getEmbargoEndDate());
|
|
257
|
|
|
258
|
}
|
|
259
|
@Test
|
|
260
|
public void testMD5() throws Exception {
|
|
261
|
String id = "10.1016/j.engstruct.2013.03.014";
|
|
262
|
String createdId = ExternalRecordParser.createOpenaireId(id);
|
|
263
|
String openaireId = "userclaim___::07ec9eb2278a11e352e3fa93a621411d";
|
|
264
|
Assert.assertEquals(createdId,openaireId);
|
|
265
|
|
|
266
|
}
|
|
267
|
}
|