Project

General

Profile

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<?xml version="1.0" encoding="UTF-8"?>
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<RESOURCE_PROFILE>
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	<HEADER>
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		<RESOURCE_IDENTIFIER value="eab4c820-e11f-4406-8b01-d31cfcccdf5f_VHJhbnNmb3JtYXRpb25SdWxlRFNSZXNvdXJjZXMvVHJhbnNmb3JtYXRpb25SdWxlRFNSZXNvdXJjZVR5cGU="/>
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		<RESOURCE_TYPE value="TransformationRuleDSResourceType"/>
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		<RESOURCE_KIND value="TransformationRuleDSResources"/>
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		<RESOURCE_URI value=""/>
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		<DATE_OF_CREATION value="2016-05-08T23:27:01+01:00"/>
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	</HEADER>
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	<BODY>
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		<CONFIGURATION>
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			<IMPORTED/>
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			<SCRIPT>
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				<TITLE>xslt_opentrials_datacite</TITLE>
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				<CODE>
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					<![CDATA[
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<xsl:stylesheet xmlns:openTrials="eu.dnetlib.data.transform.xml.OpenTrialsXsltFunctions" xmlns:dri="http://www.driver-repository.eu/namespace/dri" xmlns:xsl="http://www.w3.org/1999/XSL/Transform" xmlns:oai="http://www.openarchives.org/OAI/2.0/" xmlns:oaf="http://namespace.openaire.eu/oaf" xmlns:date="http://exslt.org/dates-and-times" xmlns:dr="http://www.driver-repository.eu/namespace/dr" exclude-result-prefixes="xsl" extension-element-prefixes="openTrials date" version="2.0">
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                        <xsl:output indent="yes"/>
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                        <xsl:param name="varOfficialName"/>
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                        <xsl:param name="varDataSourceId"/>
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                        <xsl:param name="quote">"</xsl:param>
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                        <xsl:variable name="baseURL" select="string('http://explorer.opentrials.net/trials/')"/>
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                        <xsl:template match="/">
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                            <xsl:call-template name="createRecord"/>
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                        </xsl:template>
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                        <xsl:template name="createRecord">
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                            <xsl:variable name="opentrialID" select="//column[./@name = 'id']/text()"/>
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                            <oai:record>
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                                <oai:header>
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                                    <xsl:copy-of copy-namespaces="no" select="//*[local-name() = 'header']/*"/>
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                                    <dr:dateOfTransformation>
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                                        <xsl:value-of select="date:date-time()"/>
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                                    </dr:dateOfTransformation>
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                                </oai:header>
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                                <oai:metadata>
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                                    <resource xmlns="http://datacite.org/schema/kernel-3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd">
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                    <!--
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                        In order to the web URL to be properly set in the OAF final record, the main id must be an URL.
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                        Primary and secondary ids + identifiers can be set as alternate identifiers.
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                        We want the URL to be the OpenTrial URL
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                    -->
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                    <!--
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                    <identifier identifierType="URL">
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                        <xsl:value-of select="concat($baseURL, $opentrialID)"/>
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                    </identifier>
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                    -->
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                    <!-- Temporary using the original URL of the trial because OpenTrials changed ids -->
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                                        <identifier identifierType="URL">
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                                            <xsl:value-of select="openTrials:getPrimaryRecordUrl(//column[@name = 'records']/text())"/>
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                                        </identifier>
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                                        <xsl:variable name="primaryId" select="openTrials:getPrimaryRecordIdentifier(//column[./@name = 'records']/text())"/>
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                                        <alternateIdentifiers>
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                        <!-- remove '{' and '}' -->
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                                            <xsl:variable name="cleanedIds" select="replace(replace(//column[@name = 'identifiers'], '\{', ''), '\}', '')"/>
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                                            <xsl:for-each select="tokenize($cleanedIds, ',')">
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                                                <xsl:variable name="pair" select="tokenize(.,':')"/>
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                                                <alternateIdentifier alternateIdentifierType="{translate($pair[1],$quote,'')}">
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                                                    <xsl:value-of select="normalize-space(translate($pair[2],$quote,''))"/>
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                                                </alternateIdentifier>
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                                            </xsl:for-each>
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                                        </alternateIdentifiers>
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                    <!-- No creators available -->
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                                        <creators/>
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                                        <titles>
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                                            <xsl:variable name="scientificTitle" select="normalize-space(//column[@name = 'scientific_title'])"/>
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                                            <xsl:variable name="publicTitle" select="normalize-space(//column[@name = 'public_title'])"/>
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                                            <xsl:if test="string-length($scientificTitle) &gt; 0">
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                                                <title>
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                                                    <xsl:value-of select="$scientificTitle"/>
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                                                </title>
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                                            </xsl:if>
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                                            <xsl:if test="string-length($publicTitle) &gt; 0">
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                                                <title>
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                                                    <xsl:value-of select="$publicTitle"/>
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                                                </title>
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                                            </xsl:if>
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                                        </titles>
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                                        <publisher>
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                                            <xsl:value-of select="$primaryId"/>
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                                        </publisher>
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                                        <resourceType resourceTypeGeneral="clinicalTrial">Clinical Trial</resourceType>
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                                        <descriptions>
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                                            <xsl:variable name="description" select="normalize-space(//column[@name = 'description'])"/>
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                                            <xsl:variable name="summary" select="normalize-space(//column[@name = 'brief_summary'])"/>
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                                            <xsl:if test="string-length($description) &gt; 0">
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                                                <description descriptionType="Abstract">
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                                                    <xsl:value-of select="$description"/>
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                                                </description>
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                                            </xsl:if>
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                                            <xsl:if test="string-length($summary) &gt; 0">
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                                                <description descriptionType="Abstract">
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                                                    <xsl:value-of select="$summary"/>
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                                                </description>
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                                            </xsl:if>
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                                        </descriptions>
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                                        <xsl:if test="string-length(//column[@name = 'target_sample_size']) &gt; 0">
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                                            <sizes>
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                                                <size>
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                                                    <xsl:value-of select="concat('Target sample size: ', //column[@name = 'target_sample_size'])"/>
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                                                </size>
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                                            </sizes>
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                                        </xsl:if>
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                                        <oaf:accessrights>UNKNOWN</oaf:accessrights>
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                                        <dr:CobjCategory>clinical trial</dr:CobjCategory>
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                                        <oaf:dateAccepted>
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                                            <xsl:value-of select="//column[@name = 'registration_date']"/>
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                                        </oaf:dateAccepted>
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                    <!-- We'll need to do something to patch it, if possible, looking at the jsonProv source name and id -->
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                                        <oaf:hostedBy>
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                                            <xsl:attribute name="name">
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                                                <xsl:value-of select="$varOfficialName"/>
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                                            </xsl:attribute>
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                                            <xsl:attribute name="id">
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                                                <xsl:value-of select="$varDataSourceId"/>
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                                            </xsl:attribute>
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                                        </oaf:hostedBy>
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                                        <oaf:collectedFrom>
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                                            <xsl:attribute name="name">
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                                                <xsl:value-of select="$varOfficialName"/>
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                                            </xsl:attribute>
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                                            <xsl:attribute name="id">
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                                                <xsl:value-of select="$varDataSourceId"/>
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                                            </xsl:attribute>
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                                        </oaf:collectedFrom>
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                                        <oaf:about>
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                                            <oaf:datainfo>
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                                                <oaf:inferred>false</oaf:inferred>
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                                                <oaf:deletedbyinference>false</oaf:deletedbyinference>
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                                                <oaf:trust>0.9</oaf:trust>
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                                                <oaf:inferenceprovenance/>
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                                                <oaf:provenanceaction classid="sysimport:crosswalk:datasetarchive" classname="sysimport:crosswalk:datasetarchive" schemeid="dnet:provenanceActions" schemename="dnet:provenanceActions"/>
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                                            </oaf:datainfo>
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                                        </oaf:about>
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                                    </resource>
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                                </oai:metadata>
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                                <xsl:copy-of select="//*[local-name() = 'about']"/>
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                            </oai:record>
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                        </xsl:template>
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                    </xsl:stylesheet>
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]]>
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</CODE>
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			</SCRIPT>
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		</CONFIGURATION>
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		<STATUS/>
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		<SECURITY_PARAMETERS/>
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	</BODY>
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</RESOURCE_PROFILE>
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