1
|
package eu.dnetlib.data.mapreduce.hbase.dedup.cc;
|
2
|
|
3
|
/**
|
4
|
* Created by claudio on 14/10/15.
|
5
|
*/
|
6
|
|
7
|
import java.io.IOException;
|
8
|
|
9
|
import org.apache.commons.logging.Log;
|
10
|
import org.apache.commons.logging.LogFactory;
|
11
|
import org.apache.hadoop.io.Text;
|
12
|
import org.apache.hadoop.mapreduce.Reducer;
|
13
|
|
14
|
public class MindistSearchReducer extends Reducer<Text, VertexWritable, Text, VertexWritable> {
|
15
|
|
16
|
private static final Log log = LogFactory.getLog(MindistSearchReducer.class);
|
17
|
|
18
|
public static final String UPDATE_COUNTER = "UpdateCounter";
|
19
|
public static final String SKIPPED = "SKIPPED";
|
20
|
public static final String UPDATED = "UPDATED";
|
21
|
|
22
|
private boolean depthOne;
|
23
|
|
24
|
private boolean debug = false;
|
25
|
|
26
|
@Override
|
27
|
protected void setup(Context context) throws IOException, InterruptedException {
|
28
|
super.setup(context);
|
29
|
final String recursionDepth = context.getConfiguration().get("mindist_recursion_depth");
|
30
|
log.info("got recursion depth: " + recursionDepth);
|
31
|
if (Integer.parseInt(recursionDepth) == 0) {
|
32
|
depthOne = true;
|
33
|
}
|
34
|
|
35
|
debug = context.getConfiguration().getBoolean("mindist_DEBUG", false);
|
36
|
log.info("debug mode: " + debug);
|
37
|
}
|
38
|
|
39
|
@Override
|
40
|
protected void reduce(Text key, Iterable<VertexWritable> values, Context context) throws IOException, InterruptedException {
|
41
|
|
42
|
VertexWritable realVertex = null;
|
43
|
Text currentMinimalKey = null;
|
44
|
//boolean foundEdges = false;
|
45
|
|
46
|
if (depthOne) {
|
47
|
for (VertexWritable vertex : values) {
|
48
|
if (!vertex.isMessage()) {
|
49
|
//log.info(String.format("found vertex with edges: %s", key.toString()));
|
50
|
realVertex = vertex.clone();
|
51
|
}
|
52
|
}
|
53
|
|
54
|
if (realVertex == null) {
|
55
|
context.getCounter(UPDATE_COUNTER, SKIPPED).increment(1);
|
56
|
return;
|
57
|
}
|
58
|
|
59
|
realVertex.setActivated(true);
|
60
|
realVertex.setVertexId(realVertex.getEdges().first());
|
61
|
|
62
|
if (key.compareTo(realVertex.getVertexId()) < 0) {
|
63
|
realVertex.setVertexId(key);
|
64
|
}
|
65
|
|
66
|
context.getCounter(UPDATE_COUNTER, UPDATED).increment(1);
|
67
|
} else {
|
68
|
for (VertexWritable vertex : values) {
|
69
|
if (!vertex.isMessage()) {
|
70
|
if (realVertex == null) {
|
71
|
realVertex = vertex.clone();
|
72
|
}
|
73
|
} else {
|
74
|
if (currentMinimalKey == null) {
|
75
|
currentMinimalKey = new Text(vertex.getVertexId());
|
76
|
} else {
|
77
|
|
78
|
if (currentMinimalKey.compareTo(vertex.getVertexId()) > 0) {
|
79
|
currentMinimalKey = new Text(vertex.getVertexId());
|
80
|
}
|
81
|
}
|
82
|
}
|
83
|
}
|
84
|
|
85
|
if (realVertex == null) {
|
86
|
context.getCounter(UPDATE_COUNTER, SKIPPED).increment(1);
|
87
|
return;
|
88
|
}
|
89
|
|
90
|
if (currentMinimalKey != null && currentMinimalKey.compareTo(realVertex.getVertexId()) < 0) {
|
91
|
realVertex.setVertexId(currentMinimalKey);
|
92
|
realVertex.setActivated(true);
|
93
|
context.getCounter(UPDATE_COUNTER, UPDATED).increment(1);
|
94
|
} else {
|
95
|
realVertex.setActivated(false);
|
96
|
}
|
97
|
}
|
98
|
|
99
|
context.write(key, realVertex);
|
100
|
if (debug) {
|
101
|
log.info(realVertex.toJSON());
|
102
|
}
|
103
|
}
|
104
|
|
105
|
}
|