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package eu.dnetlib.repo.manager.service.controllers;
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import com.fasterxml.jackson.databind.DeserializationFeature;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import eu.dnetlib.domain.data.Repository;
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import eu.dnetlib.domain.data.RepositoryInterface;
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import eu.dnetlib.domain.enabling.Vocabulary;
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import eu.dnetlib.repo.manager.service.utils.Converter;
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import eu.dnetlib.repo.manager.shared.*;
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import gr.uoa.di.driver.enabling.vocabulary.VocabularyLoader;
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import org.apache.commons.codec.digest.DigestUtils;
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import org.apache.log4j.Logger;
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import org.json.JSONArray;
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import org.json.JSONException;
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import org.json.JSONObject;
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import org.springframework.beans.factory.annotation.Autowired;
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import org.springframework.beans.factory.annotation.Value;
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import org.springframework.core.ParameterizedTypeReference;
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import org.springframework.http.HttpEntity;
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import org.springframework.http.HttpHeaders;
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import org.springframework.http.HttpMethod;
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import org.springframework.http.ResponseEntity;
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import org.springframework.http.converter.json.MappingJackson2HttpMessageConverter;
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import org.springframework.stereotype.Component;
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import org.springframework.web.bind.annotation.PathVariable;
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import org.springframework.web.bind.annotation.RequestBody;
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import org.springframework.web.bind.annotation.RequestParam;
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import org.springframework.web.client.RestClientException;
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import org.springframework.web.client.RestTemplate;
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import org.springframework.web.util.UriComponents;
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import org.springframework.web.util.UriComponentsBuilder;
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import javax.annotation.PostConstruct;
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import javax.ws.rs.QueryParam;
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import java.sql.Timestamp;
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import java.text.Normalizer;
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import java.util.*;
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import java.util.concurrent.ConcurrentHashMap;
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@Component
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public class RepositoryApiImpl implements RepositoryApi {
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@Value("${api.baseAddress}")
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private String baseAddress;
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private RestTemplate restTemplate = null;
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private HttpHeaders httpHeaders;
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private final String[] vocabularyNames = {"dnet:countries", "dnet:datasource_typologies", "dnet:compatibilityLevel"};
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private static final Logger LOGGER = Logger.getLogger(RepositoryApiImpl.class);
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@Value("${services.repomanager.usageStatisticsDiagramsBaseURL}")
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private String usageStatisticsDiagramsBaseURL;
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@Value("${services.repomanager.usageStatisticsNumbersBaseURL}")
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private String usageStatisticsNumbersBaseURL;
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@Autowired
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private VocabularyLoader vocabularyLoader;
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@Autowired
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private PiWikApi piWikApi;
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private Map<String, Vocabulary> vocabularyMap = new ConcurrentHashMap<String, Vocabulary>();
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private Map<String, String> countriesMap = new HashMap<>();
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private Map<String, String> inverseCountriesMap = new HashMap<>();
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@PostConstruct
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private void init() {
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LOGGER.debug("Initialization method of repository api!");
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restTemplate = new RestTemplate();
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restTemplate.getMessageConverters().add(new MappingJackson2HttpMessageConverter());
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httpHeaders = new HttpHeaders();
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httpHeaders.set("Content-Type", "application/json");
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for (String vocName : vocabularyNames) {
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vocabularyMap.put(vocName, vocabularyLoader.getVocabulary(vocName, Locale.ENGLISH, Locale.ROOT));
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}
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Country[] countries = getCountries();
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for (Country c : countries) {
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countriesMap.put(c.getName(), c.getCode());
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inverseCountriesMap.put(c.getCode(), c.getName());
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}
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}
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@Override
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public List<String> testAggregations() throws JSONException {
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int page = 0;
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int size = 1000;
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UriComponents uriComponents = UriComponentsBuilder
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.fromHttpUrl(baseAddress + "/ds/list/")
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.path("/{page}/{size}/")
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.build().expand(page, size).encode();
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String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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List<String> ids = new ArrayList<>();
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while (!rs.equals("[]")) {
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ids.addAll(getIdsWithNonEmptyAggregations(rs));
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LOGGER.debug("Checked " + (page + 1) * size + " records!");
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page += 1;
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uriComponents = UriComponentsBuilder
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.fromHttpUrl(baseAddress + "/ds/list/")
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.path("/{page}/{size}/")
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.build().expand(page, size).encode();
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rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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}
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return ids;
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}
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private List<String> getIdsWithNonEmptyAggregations(String rs) throws JSONException {
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JSONArray ids = new JSONArray(rs);
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List<String> agg_ids = new ArrayList<>();
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for (int i = 0; i < ids.length(); i++) {
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String id = ids.getString(i);
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Aggregations aggregations = getRepositoryAggregations(id);
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if (aggregations.getAggregationHistory() != null)
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agg_ids.add(id);
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}
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return agg_ids;
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}
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@Override
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public Country[] getCountries() {
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UriComponents uriComponents = UriComponentsBuilder
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.fromHttpUrl(baseAddress + "/ds/countries")
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.build().encode();
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return restTemplate.getForObject(uriComponents.toUri(), Country[].class);
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}
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@Override
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public List<Repository> getRepositoriesByCountry(@PathVariable("country") String country,
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@PathVariable("mode") String mode,
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@RequestParam(value = "managed",required=false) Boolean managed) throws JSONException {
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LOGGER.debug("Getting repositories by country!");
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int page = 0;
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int size = 100;
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String countryCode = countriesMap.get(country);
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String filterKey = "UNKNOWN";
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if (mode.equalsIgnoreCase("opendoar")) {
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filterKey = "openaire____::opendoar";
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} else if (mode.equalsIgnoreCase("re3data")) {
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filterKey = "openaire____::re3data";
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} else if (mode.equalsIgnoreCase("jour_aggr")) {
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filterKey = "infrastruct_::openaire";
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}
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LOGGER.debug("Country code equals : " + countryCode);
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LOGGER.debug("Filter mode equals : " + filterKey);
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UriComponents uriComponents = UriComponentsBuilder
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.fromHttpUrl(baseAddress + "/ds/search/country/")
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.path("/{page}/{size}/")
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.queryParam("country", countryCode)
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.queryParam("managed", managed)
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.build().expand(page, size).encode();
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String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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JSONArray jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
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List<Repository> resultSet = new ArrayList<>();
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while (jsonArray.length() > 0 ) {
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List<Repository> rep = Converter.jsonToRepositoryList(new JSONObject(rs));
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Collection<Repository> repos = this.getRepositoriesByMode(filterKey, rep);
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resultSet.addAll(repos);
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page += 1;
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uriComponents = UriComponentsBuilder
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.fromHttpUrl(baseAddress + "/ds/search/country/")
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.path("/{page}/{size}/")
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.queryParam("country", countryCode)
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.queryParam("managed", managed)
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.build().expand(page, size).encode();
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rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
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}
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for (Repository r : resultSet)
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this.getRepositoryInfo(r);
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return resultSet;
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}
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private void getRepositoryInfo(Repository r) throws JSONException {
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r.setInterfaces(this.getRepositoryInterface(r.getId()));
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r.setPiwikInfo(piWikApi.getPiwikSiteForRepo(r.getId()));
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r.setCountryName(getCountryName(r.getCountryCode()));
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}
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private Collection<Repository> getRepositoriesByMode(String mode, List<Repository> rs) {
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List<Repository> reps = new ArrayList<>();
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for (Repository r : rs) {
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if (r.getCollectedFrom().equals(mode))
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reps.add(r);
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}
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return reps;
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}
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@Override
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public List<Repository> getRepositoriesOfUser(@PathVariable("userEmail") String userEmail,
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@PathVariable("page") String page,
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@PathVariable("size") String size) throws JSONException {
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LOGGER.debug("Retreiving repositories of user : " + userEmail );
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UriComponents uriComponents = UriComponentsBuilder
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.fromHttpUrl(baseAddress + "/ds/search/registeredby/")
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.path("/{page}/{size}/")
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.queryParam("registeredBy", userEmail)
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.build().expand(page, size).encode();
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String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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List<Repository> repos = Converter.jsonToRepositoryList(new JSONObject(rs));
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for (Repository r : repos)
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this.getRepositoryInfo(r);
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return repos;
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}
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@Override
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public Repository getRepositoryById(@PathVariable("id") String id) throws JSONException {
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UriComponents uriComponents = UriComponentsBuilder
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.fromHttpUrl(baseAddress + "/ds/get/")
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.path("/{id}/")
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.build().expand(id).encode();
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String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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Repository repo = Converter.jsonToRepositoryObject(new JSONObject(rs));
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if (repo != null)
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getRepositoryInfo(repo);
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return repo;
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}
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252
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253
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254
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@Override
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255
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public Aggregations getRepositoryAggregations(@PathVariable("id") String id) throws JSONException {
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UriComponents uriComponents = UriComponentsBuilder
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.fromHttpUrl(baseAddress + "/ds/get/")
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.path("/{id}/")
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.build().expand(id).encode();
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261
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262
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String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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JSONObject repository = new JSONObject(rs);
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264
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265
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Aggregations aggregations = new Aggregations();
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266
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267
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try {
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aggregations.setAggregationHistory(Converter.getAggregationHistoryFromJson(repository));
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aggregations.setLastCollection(Converter.getLastCollectionFromJson(repository));
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aggregations.setLastTransformation(Converter.getLastTransformationFromJson(repository));
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return aggregations;
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} catch (JSONException e) {
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LOGGER.debug("JSON aggregation exception ", e);
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throw e;
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275
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}
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276
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277
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}
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278
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279
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@Override
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280
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public List<Repository> getRepositoriesByName(@PathVariable("name") String name,
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281
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@PathVariable("page") String page,
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282
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@PathVariable("size") String size) throws JSONException {
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UriComponents uriComponents = UriComponentsBuilder
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284
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.fromHttpUrl(baseAddress + "/ds/search/name/")
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285
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.path("/{page}/{size}")
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286
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.queryParam("name", name)
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287
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.build().expand(page, size).encode();
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289
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String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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290
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List<Repository> repos = Converter.jsonToRepositoryList(new JSONObject(rs));
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291
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for (Repository r : repos)
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292
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getRepositoryInfo(r);
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293
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return repos;
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294
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}
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295
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296
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@Override
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297
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public List<RepositoryInterface> getRepositoryInterface(@PathVariable("id") String id) throws JSONException {
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298
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299
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UriComponents uriComponents = UriComponentsBuilder
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300
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.fromHttpUrl(baseAddress + "/ds/api/")
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301
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.path("/{id}/")
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302
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.build().expand(id).encode();
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303
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304
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String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
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305
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return Converter.jsonToRepositoryInterfaceList(new JSONArray(rs));
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306
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}
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307
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308
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@Override
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309
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public void addRepository(@RequestParam("datatype") String datatype,
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310
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@RequestBody Repository repository) throws Exception {
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311
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312
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/*JSONObject json_params = new JSONObject(params);
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313
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String datatype = json_params.getString("datatype");
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314
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String json_repository = json_params.getString("repository");
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315
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Repository repository = null;*/
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316
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ObjectMapper mapper = new ObjectMapper();
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317
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mapper.disable(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES);
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318
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try {
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319
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String json_repo = mapper.writerWithDefaultPrettyPrinter().writeValueAsString(repository);
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320
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LOGGER.debug("repository -> " + json_repo);
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321
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// repository = mapper.readValue(json_repository, Repository.class);
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322
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} catch (Exception e) {
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323
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LOGGER.debug("Error parsing repository ", e);
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324
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throw e;
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325
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}
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326
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repository = this.setRepositoryFeatures(datatype,repository);
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327
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328
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LOGGER.debug("storing " + datatype + " repository with id: " + repository.getId());
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329
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if (!datatype.equalsIgnoreCase("opendoar") && !datatype.equalsIgnoreCase("re3data")) {
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330
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if (datatype.equalsIgnoreCase("journal") || datatype.equalsIgnoreCase("aggregator")) {
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331
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LOGGER.debug("looking if " + datatype + " " + repository.getOfficialName() + " is already in datasources");
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332
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if (getRepositoryById(repository.getId()) != null) {
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333
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String retMessage = datatype + " '" + repository.getOfficialName() + "' is already in datasources.";
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334
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repository.getInterfaces().clear();
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335
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LOGGER.debug(retMessage);
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336
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} else {
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337
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LOGGER.debug(datatype + " " + repository.getOfficialName() + " is not in datasources. Inserting..");
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338
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this.storeRepository(repository);
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339
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}
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340
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}
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341
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} else {
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342
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this.updateRepository(repository);
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343
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}
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344
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345
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LOGGER.debug("Inserting Interfaces");
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346
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Iterator var11 = repository.getInterfaces().iterator();
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347
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348
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while (var11.hasNext()) {
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349
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RepositoryInterface iFace = (RepositoryInterface) var11.next();
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350
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if (!iFace.getBaseUrl().isEmpty() && !iFace.getDesiredCompatibilityLevel().isEmpty()) {
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351
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if (iFace.getId() != null && !iFace.getId().isEmpty()) {
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352
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LOGGER.debug("updating iface..");
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353
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this.updateInterface(datatype,iFace);
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354
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LOGGER.debug("updated successfully");
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355
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} else {
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356
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LOGGER.debug("adding new iface..");
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357
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this.registerRepositoryInterface(repository.getId(),iFace,datatype);
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358
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}
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359
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}
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360
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}
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361
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}
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|
362
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363
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private void updateRepository(Repository repository) {
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364
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this.updateRegisteredByValue(repository.getId(),repository.getRegisteredBy());
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365
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this.updateEnglishName(repository.getId(),repository.getEnglishName());
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366
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this.updateLogoUrl(repository.getId(),repository.getLogoUrl());
|
|
367
|
this.updateTimezone(repository.getId(), String.valueOf(repository.getTimezone()));
|
|
368
|
//TODO update datasource type
|
|
369
|
}
|
|
370
|
|
|
371
|
private void updateRegisteredByValue(String id, String registeredBy) {
|
|
372
|
|
|
373
|
LOGGER.debug("Updating registered by value with : " + registeredBy );
|
|
374
|
UriComponents uriComponents = UriComponentsBuilder
|
|
375
|
.fromHttpUrl(baseAddress + "/ds/registeredby/")
|
|
376
|
.queryParam("dsId",id)
|
|
377
|
.queryParam("registeredBy", registeredBy)
|
|
378
|
.build()
|
|
379
|
.encode();
|
|
380
|
|
|
381
|
restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
382
|
}
|
|
383
|
|
|
384
|
private Repository setRepositoryFeatures(String datatype, Repository repository) {
|
|
385
|
|
|
386
|
//TODO update map
|
|
387
|
repository.setCountryCode(countriesMap.get(repository.getCountryName()));
|
|
388
|
|
|
389
|
repository.setActivationId(UUID.randomUUID().toString());
|
|
390
|
// repo.setRegisteredBy((String) session.get(LocalVocabularies.loggedInField));
|
|
391
|
|
|
392
|
if (datatype.equals("opendoar") || datatype.equals("re3data")) {
|
|
393
|
repository.setProvenanceActionClass("sysimport:crosswalk:entityregistry");
|
|
394
|
} else if (datatype.equals("journal")) {
|
|
395
|
repository.setProvenanceActionClass("user:insert");
|
|
396
|
repository.setCollectedFrom("infrastruct_::openaire");
|
|
397
|
if (repository.getIssn() != null && repository.getIssn().length() == 0)
|
|
398
|
repository.setIssn(com.unboundid.util.Base64.encode(repository.getOfficialName()).substring(0, 8));
|
|
399
|
repository.setId("openaire____::issn" + repository.getIssn());
|
|
400
|
repository.setNamespacePrefix("issn" + repository.getIssn());
|
|
401
|
} else if (datatype.equals("aggregator")) {
|
|
402
|
repository.setProvenanceActionClass("user:insert");
|
|
403
|
repository.setCollectedFrom("infrastruct_::openaire");
|
|
404
|
repository.setId("openaire____::" + com.unboundid.util.Base64.encode(repository.getOfficialName()));
|
|
405
|
repository.setNamespacePrefix(Normalizer.normalize(repository.getOfficialName().toLowerCase().replace(" ", "_"), Normalizer.Form.NFD).replaceAll("[^a-zA-Z0-9]", ""));
|
|
406
|
if (repository.getNamespacePrefix().length() > 12) {
|
|
407
|
repository.setNamespacePrefix(repository.getNamespacePrefix().substring(0, 12));
|
|
408
|
} else {
|
|
409
|
while (repository.getNamespacePrefix().length() < 12)
|
|
410
|
repository.setNamespacePrefix(repository.getNamespacePrefix().concat("_"));
|
|
411
|
}
|
|
412
|
}
|
|
413
|
return repository;
|
|
414
|
}
|
|
415
|
|
|
416
|
private void updateInterface(String datatype,RepositoryInterface iFace) {
|
|
417
|
//TODO call update base url
|
|
418
|
//((DatasourceManagerService) this.dmService.getService()).updateBaseUrl(repo.getId(), iFace.getId(), iFace.getBaseUrl());
|
|
419
|
if (!iFace.getAccessSet().isEmpty()) {
|
|
420
|
LOGGER.debug("set not empty: " + iFace.getAccessSet());
|
|
421
|
//TODO call update method for access params
|
|
422
|
// ((DatasourceManagerService) this.dmService.getService()).updateAccessParam(repo.getId(), iFace.getId(), "set", iFace.getAccessSet(), false);
|
|
423
|
} else {
|
|
424
|
//TODO call deleteAccessParamOrExtraField
|
|
425
|
//((DatasourceManagerService) this.dmService.getService()).deleteAccessParamOrExtraField(repo.getId(), iFace.getId(), "set");
|
|
426
|
}
|
|
427
|
//TODO update content description
|
|
428
|
//((DatasourceManagerService) this.dmService.getService()).updateContentDescription(repo.getId(), iFace.getId(), "metadata");
|
|
429
|
if (datatype.equals("re3data")) {
|
|
430
|
//TODO call update access params
|
|
431
|
// ((DatasourceManagerService) this.dmService.getService()).updateAccessParam(repo.getId(), iFace.getId(), "format", "oai_datacite", false);
|
|
432
|
iFace.setAccessFormat("oai_datacite");
|
|
433
|
} else {
|
|
434
|
//TODO call update access params
|
|
435
|
//((DatasourceManagerService) this.dmService.getService()).updateAccessParam(repo.getId(), iFace.getId(), "format", "oai_dc", false);
|
|
436
|
iFace.setAccessFormat("oai_dc");
|
|
437
|
}
|
|
438
|
|
|
439
|
}
|
|
440
|
|
|
441
|
private RepositoryInterface createRepositoryInterface(Repository repo, RepositoryInterface iFace, String datatype) {
|
|
442
|
|
|
443
|
iFace.setContentDescription("metadata");
|
|
444
|
iFace.setCompliance("UNKNOWN");
|
|
445
|
if (datatype.equals("re3data")) {
|
|
446
|
iFace.setAccessFormat("oai_datacite");
|
|
447
|
} else {
|
|
448
|
iFace.setAccessFormat("oai_dc");
|
|
449
|
}
|
|
450
|
|
|
451
|
if (repo.getDatasourceClass() != null && !repo.getDatasourceClass().isEmpty()) {
|
|
452
|
iFace.setTypology(repo.getDatasourceClass());
|
|
453
|
} else if (datatype.equalsIgnoreCase("journal")) {
|
|
454
|
iFace.setTypology("pubsrepository::journal");
|
|
455
|
} else if (datatype.equalsIgnoreCase("aggregator")) {
|
|
456
|
iFace.setTypology("aggregator::pubsrepository::unknown");
|
|
457
|
} else if (datatype.equalsIgnoreCase("opendoar")) {
|
|
458
|
iFace.setTypology("pubsrepository::unknown");
|
|
459
|
} else if (datatype.equalsIgnoreCase("re3data")) {
|
|
460
|
iFace.setTypology("datarepository::unknown");
|
|
461
|
}
|
|
462
|
|
|
463
|
iFace.setRemovable(true);
|
|
464
|
iFace.setAccessProtocol("oai");
|
|
465
|
iFace.setMetadataIdentifierPath("//*[local-name()='header']/*[local-name()='identifier']");
|
|
466
|
// iFace.setId("api_________::" + repo.getId() + "::" + UUID.randomUUID().toString().substring(0, 8));
|
|
467
|
if (iFace.getAccessSet().isEmpty()) {
|
|
468
|
LOGGER.debug("set is empty: " + iFace.getAccessSet());
|
|
469
|
iFace.removeAccessSet();
|
|
470
|
}
|
|
471
|
return iFace;
|
|
472
|
}
|
|
473
|
|
|
474
|
private void storeRepository(Repository repository) throws JSONException {
|
|
475
|
|
|
476
|
Date utilDate = new Date();
|
|
477
|
Timestamp date = new Timestamp(utilDate.getTime());
|
|
478
|
repository.setDateOfCollection(date);
|
|
479
|
repository.setAggregator("OPENAIRE");
|
|
480
|
|
|
481
|
UriComponents uriComponents = UriComponentsBuilder
|
|
482
|
.fromHttpUrl(baseAddress + "/ds/add/")
|
|
483
|
.build()
|
|
484
|
.encode();
|
|
485
|
String json_repository = Converter.repositoryObjectToJson(repository);
|
|
486
|
HttpEntity<String> httpEntity = new HttpEntity <String> (json_repository,httpHeaders);
|
|
487
|
restTemplate.postForObject(uriComponents.toUri(),httpEntity,String.class);
|
|
488
|
}
|
|
489
|
|
|
490
|
@Override
|
|
491
|
public void deleteRepositoryInterface(@PathVariable("id") String id){
|
|
492
|
UriComponents uriComponents = UriComponentsBuilder
|
|
493
|
.fromHttpUrl(baseAddress + "/ds/api/")
|
|
494
|
.path("/{id}/")
|
|
495
|
.build().expand(id).encode();
|
|
496
|
restTemplate.delete(uriComponents.toUri());
|
|
497
|
}
|
|
498
|
|
|
499
|
@Override
|
|
500
|
public RepositoryInterface addRepositoryInterface(@RequestParam("datatype") String datatype,
|
|
501
|
@RequestParam("repoId") String repoId,
|
|
502
|
@RequestBody RepositoryInterface repositoryInterface) throws JSONException {
|
|
503
|
|
|
504
|
/* JSONObject json_params = new JSONObject(params);
|
|
505
|
// LOGGER.debug(params);
|
|
506
|
//TODO iFace parameter from gui. Object to json
|
|
507
|
String datatype = json_params.getString("datatype");
|
|
508
|
String repoId = json_params.getString("repoId");
|
|
509
|
String json_iFace = json_params.getString("iFace");
|
|
510
|
RepositoryInterface iFace = null;
|
|
511
|
|
|
512
|
ObjectMapper mapper = new ObjectMapper();
|
|
513
|
try {
|
|
514
|
iFace = mapper.readValue(json_iFace, RepositoryInterface.class);
|
|
515
|
} catch (Exception e1) {
|
|
516
|
LOGGER.debug("Error parsing repository interface ", e1);
|
|
517
|
}*/
|
|
518
|
return registerRepositoryInterface(repoId,repositoryInterface,datatype);
|
|
519
|
}
|
|
520
|
|
|
521
|
private RepositoryInterface registerRepositoryInterface(String repoId, RepositoryInterface iFace, String datatype) {
|
|
522
|
Repository e = null;
|
|
523
|
try {
|
|
524
|
e = this.getRepositoryById(repoId);
|
|
525
|
iFace = createRepositoryInterface(e,iFace,datatype);
|
|
526
|
ObjectMapper mapper = new ObjectMapper();
|
|
527
|
|
|
528
|
String json_interface = Converter.repositoryInterfaceObjectToJson(e,iFace);
|
|
529
|
LOGGER.debug("iFace equals -> " + json_interface);
|
|
530
|
UriComponents uriComponents = UriComponentsBuilder
|
|
531
|
.fromHttpUrl(baseAddress + "/ds/api/add/")
|
|
532
|
.build()
|
|
533
|
.encode();
|
|
534
|
|
|
535
|
|
|
536
|
HttpEntity<String> httpEntity = new HttpEntity <String> (json_interface,httpHeaders);
|
|
537
|
restTemplate.postForObject(uriComponents.toUri(),httpEntity,String.class);
|
|
538
|
return iFace;
|
|
539
|
|
|
540
|
} catch (JSONException e1) {
|
|
541
|
LOGGER.debug("Error parsing json ",e1);
|
|
542
|
}
|
|
543
|
return null;
|
|
544
|
}
|
|
545
|
|
|
546
|
@Override
|
|
547
|
public List<String> getDnetCountries() {
|
|
548
|
LOGGER.debug("Getting dnet-countries!");
|
|
549
|
return Converter.readFile("countries.txt");
|
|
550
|
}
|
|
551
|
|
|
552
|
@Override
|
|
553
|
public List<String> getTypologies() {
|
|
554
|
return Converter.readFile("typologies.txt");
|
|
555
|
}
|
|
556
|
|
|
557
|
@Override
|
|
558
|
public List<Timezone> getTimezones() {
|
|
559
|
List<String> timezones = Converter.readFile("timezones.txt");
|
|
560
|
return Converter.toTimezones(timezones);
|
|
561
|
}
|
|
562
|
|
|
563
|
@Override
|
|
564
|
public String updateManagedStatus(@RequestParam(value = "id") String id,
|
|
565
|
@RequestParam(value = "managed") String managed) {
|
|
566
|
|
|
567
|
UriComponents uriComponents = UriComponentsBuilder
|
|
568
|
.fromHttpUrl(baseAddress + "/ds/manage/")
|
|
569
|
.queryParam("id",id)
|
|
570
|
.queryParam("managed",managed)
|
|
571
|
.build().encode();
|
|
572
|
|
|
573
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
574
|
}
|
|
575
|
|
|
576
|
@Override
|
|
577
|
public String updateEnglishName(@RequestParam(value = "id") String id,
|
|
578
|
@RequestParam(value = "englishname") String englishName) {
|
|
579
|
|
|
580
|
UriComponents uriComponents = UriComponentsBuilder
|
|
581
|
.fromHttpUrl(baseAddress + "/ds/englishname/")
|
|
582
|
.queryParam("dsId",id)
|
|
583
|
.queryParam("englishname",englishName)
|
|
584
|
.build().encode();
|
|
585
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
586
|
|
|
587
|
|
|
588
|
}
|
|
589
|
|
|
590
|
@Override
|
|
591
|
public String updateLatitude(@RequestParam(value = "id") String id,
|
|
592
|
@RequestParam(value = "latitude") String latitude) {
|
|
593
|
|
|
594
|
UriComponents uriComponents = UriComponentsBuilder
|
|
595
|
.fromHttpUrl(baseAddress + "/ds/latitude/")
|
|
596
|
.queryParam("dsId",id)
|
|
597
|
.queryParam("latitude",latitude)
|
|
598
|
.build().encode();
|
|
599
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
600
|
}
|
|
601
|
|
|
602
|
@Override
|
|
603
|
public String updateLongitude(@RequestParam(value = "id") String id,
|
|
604
|
@RequestParam(value = "longitude") String longitude) {
|
|
605
|
|
|
606
|
UriComponents uriComponents = UriComponentsBuilder
|
|
607
|
.fromHttpUrl(baseAddress + "/ds/longitude/")
|
|
608
|
.queryParam("dsId",id)
|
|
609
|
.queryParam("longitude",longitude)
|
|
610
|
.build().encode();
|
|
611
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
612
|
}
|
|
613
|
|
|
614
|
@Override
|
|
615
|
public String updateOfficialName(@RequestParam(value = "id") String id,
|
|
616
|
@RequestParam(value = "officialname") String officialname) {
|
|
617
|
|
|
618
|
UriComponents uriComponents = UriComponentsBuilder
|
|
619
|
.fromHttpUrl(baseAddress + "/ds/officialname/")
|
|
620
|
.queryParam("dsId",id)
|
|
621
|
.queryParam("officialname",officialname)
|
|
622
|
.build().encode();
|
|
623
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
624
|
}
|
|
625
|
|
|
626
|
@Override
|
|
627
|
public String updateTimezone(@RequestParam(value = "id") String id,
|
|
628
|
@RequestParam(value = "timezone") String timezone) {
|
|
629
|
UriComponents uriComponents = UriComponentsBuilder
|
|
630
|
.fromHttpUrl(baseAddress + "/ds/timezone")
|
|
631
|
.queryParam("dsId",id)
|
|
632
|
.queryParam("timezone",timezone)
|
|
633
|
.build().encode();
|
|
634
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
635
|
}
|
|
636
|
|
|
637
|
@Override
|
|
638
|
public String updateTypology(@RequestParam(value = "id") String id,
|
|
639
|
@RequestParam(value = "typology") String typology) {
|
|
640
|
UriComponents uriComponents = UriComponentsBuilder
|
|
641
|
.fromHttpUrl(baseAddress + "/ds/typology")
|
|
642
|
.queryParam("dsId",id)
|
|
643
|
.queryParam("typology",typology)
|
|
644
|
.build().encode();
|
|
645
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
646
|
}
|
|
647
|
|
|
648
|
@Override
|
|
649
|
public String updateLogoUrl(@RequestParam(value = "id") String id,
|
|
650
|
@RequestParam(value = "logoUrl") String logoUrl) {
|
|
651
|
UriComponents uriComponents = UriComponentsBuilder
|
|
652
|
.fromHttpUrl(baseAddress + "/ds/logourl")
|
|
653
|
.queryParam("dsId",id)
|
|
654
|
.queryParam("logourl",logoUrl)
|
|
655
|
.build().encode();
|
|
656
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
657
|
}
|
|
658
|
|
|
659
|
@Override
|
|
660
|
public String updatePlatform(String id, String platform) {
|
|
661
|
UriComponents uriComponents = UriComponentsBuilder
|
|
662
|
.fromHttpUrl(baseAddress + "/ds/platform")
|
|
663
|
.queryParam("dsId",id)
|
|
664
|
.queryParam("platform",platform)
|
|
665
|
.build().encode();
|
|
666
|
return restTemplate.postForObject(uriComponents.toUri(), null,String.class);
|
|
667
|
}
|
|
668
|
|
|
669
|
@Override
|
|
670
|
public List<String> getUrlsOfUserRepos(@PathVariable("user_email") String user_email,
|
|
671
|
@PathVariable("page") String page,
|
|
672
|
@PathVariable("size") String size) throws JSONException {
|
|
673
|
UriComponents uriComponents = UriComponentsBuilder
|
|
674
|
.fromHttpUrl(baseAddress + "/api/baseurl/")
|
|
675
|
.path("/{page}/{size}")
|
|
676
|
.queryParam("userEmail",user_email)
|
|
677
|
.build().expand(page,size).encode();
|
|
678
|
return Arrays.asList(restTemplate.getForObject(uriComponents.toUri(), String[].class));
|
|
679
|
}
|
|
680
|
|
|
681
|
@Override
|
|
682
|
public List<String> getDatasourceVocabularies(@PathVariable("mode") String mode) {
|
|
683
|
|
|
684
|
List<String> resultSet = new ArrayList<>();
|
|
685
|
for (Map.Entry<String, String> entry : this.getVocabulary("dnet:datasource_typologies").getAsMap().entrySet()) {
|
|
686
|
if (mode.equalsIgnoreCase("aggregator")) {
|
|
687
|
if (entry.getKey().contains("aggregator"))
|
|
688
|
resultSet.add(entry.getValue());
|
|
689
|
} else if (mode.equalsIgnoreCase("journal")) {
|
|
690
|
if (entry.getKey().contains("journal"))
|
|
691
|
resultSet.add(entry.getValue());
|
|
692
|
} else if (mode.equalsIgnoreCase("opendoar")) {
|
|
693
|
if (entry.getKey().contains("pubsrepository"))
|
|
694
|
resultSet.add(entry.getValue());
|
|
695
|
} else if (mode.equalsIgnoreCase("re3data")) {
|
|
696
|
if (entry.getKey().contains("datarepository"))
|
|
697
|
resultSet.add(entry.getValue());
|
|
698
|
}
|
|
699
|
}
|
|
700
|
|
|
701
|
|
|
702
|
return resultSet;
|
|
703
|
}
|
|
704
|
|
|
705
|
private Vocabulary getVocabulary(String vocName) {
|
|
706
|
|
|
707
|
if (!vocabularyMap.containsKey(vocName)) {
|
|
708
|
vocabularyMap.put(vocName, vocabularyLoader.getVocabulary(vocName, Locale.ENGLISH, Locale.ROOT));
|
|
709
|
}
|
|
710
|
return vocabularyMap.get(vocName);
|
|
711
|
}
|
|
712
|
|
|
713
|
|
|
714
|
@Override
|
|
715
|
public Map<String, String> getCompatibilityClasses(@PathVariable("mode") String mode) {
|
|
716
|
|
|
717
|
LOGGER.debug("Getting compatibility classes for mode: " + mode);
|
|
718
|
Map<String, String> retMap = new HashMap<String, String>();
|
|
719
|
|
|
720
|
Map<String, String> compatibilityClasses = this.getVocabulary("dnet:compatibilityLevel").getAsMap();
|
|
721
|
boolean foundData = false;
|
|
722
|
for (Map.Entry<String, String> entry : compatibilityClasses.entrySet()) {
|
|
723
|
if (mode.equalsIgnoreCase(Constants.REPOSITORY_MODE_ALL))
|
|
724
|
return compatibilityClasses;
|
|
725
|
else if (mode.equalsIgnoreCase(Constants.REPOSITORY_MODE_RE3DATA)) {
|
|
726
|
if (entry.getKey().matches("^openaire[1-9].0_data$")) {
|
|
727
|
retMap.put(entry.getKey(), entry.getValue());
|
|
728
|
foundData = true;
|
|
729
|
}
|
|
730
|
} else {
|
|
731
|
if (entry.getKey().matches("^openaire[1-9].0$") || entry.getKey().equals("driver"))
|
|
732
|
retMap.put(entry.getKey(), entry.getValue());
|
|
733
|
}
|
|
734
|
}
|
|
735
|
|
|
736
|
//TODO TO BE REMOVED WHEN VOCABULARIES ARE UPDATED
|
|
737
|
if (mode.equalsIgnoreCase(Constants.REPOSITORY_MODE_RE3DATA) && !foundData)
|
|
738
|
retMap.put("openaire2.0_data", "OpenAIRE Data (funded, referenced datasets)");
|
|
739
|
|
|
740
|
return retMap;
|
|
741
|
}
|
|
742
|
|
|
743
|
@Override
|
|
744
|
public Map<String, String> getDatasourceClasses(@PathVariable("mode") String mode) {
|
|
745
|
|
|
746
|
LOGGER.debug("Getting datasource classes for mode: " + mode);
|
|
747
|
|
|
748
|
Map<String, String> retMap = new HashMap<String, String>();
|
|
749
|
|
|
750
|
for (Map.Entry<String, String> entry : this.getVocabulary("dnet:datasource_typologies").getAsMap().entrySet()) {
|
|
751
|
if (mode.equalsIgnoreCase("aggregator")) {
|
|
752
|
if (entry.getKey().contains("aggregator"))
|
|
753
|
retMap.put(entry.getKey(), entry.getValue());
|
|
754
|
} else if (mode.equalsIgnoreCase("journal")) {
|
|
755
|
if (entry.getKey().contains("journal"))
|
|
756
|
retMap.put(entry.getKey(), entry.getValue());
|
|
757
|
} else if (mode.equalsIgnoreCase("opendoar")) {
|
|
758
|
if (entry.getKey().contains("pubsrepository"))
|
|
759
|
retMap.put(entry.getKey(), entry.getValue());
|
|
760
|
} else if (mode.equalsIgnoreCase("re3data")) {
|
|
761
|
if (entry.getKey().contains("datarepository"))
|
|
762
|
retMap.put(entry.getKey(), entry.getValue());
|
|
763
|
}
|
|
764
|
}
|
|
765
|
return retMap;
|
|
766
|
|
|
767
|
}
|
|
768
|
|
|
769
|
@Override
|
|
770
|
public String getCountryName(String countryCode) {
|
|
771
|
return inverseCountriesMap.get(countryCode);
|
|
772
|
}
|
|
773
|
|
|
774
|
@Override
|
|
775
|
public MetricsInfo getMetricsInfoForRepository(@PathVariable("repoId") String repoId) throws RepositoryServiceException {
|
|
776
|
try {
|
|
777
|
|
|
778
|
MetricsInfo metricsInfo = new MetricsInfo();
|
|
779
|
metricsInfo.setDiagramsBaseURL(this.usageStatisticsDiagramsBaseURL);
|
|
780
|
metricsInfo.setMetricsNumbers(getMetricsNumbers(getOpenAIREId(repoId)));
|
|
781
|
return metricsInfo;
|
|
782
|
|
|
783
|
} catch (Exception e) {
|
|
784
|
LOGGER.error("Error while getting metrics info for repository: ", e);
|
|
785
|
//emailUtils.reportException(e);
|
|
786
|
throw new RepositoryServiceException("General error", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
|
787
|
}
|
|
788
|
}
|
|
789
|
|
|
790
|
private MetricsNumbers getMetricsNumbers(String openAIREID) throws BrokerException {
|
|
791
|
|
|
792
|
//build the uri params
|
|
793
|
UriComponentsBuilder builder = UriComponentsBuilder.fromHttpUrl(this.usageStatisticsNumbersBaseURL + openAIREID + "/clicks");
|
|
794
|
|
|
795
|
//create new template engine
|
|
796
|
RestTemplate template = new RestTemplate();
|
|
797
|
template.getMessageConverters().add(new MappingJackson2HttpMessageConverter());
|
|
798
|
ResponseEntity<MetricsNumbers> resp;
|
|
799
|
try {
|
|
800
|
//communicate with endpoint
|
|
801
|
resp = template.exchange(
|
|
802
|
builder.build().encode().toUri(),
|
|
803
|
HttpMethod.GET,
|
|
804
|
null,
|
|
805
|
new ParameterizedTypeReference<MetricsNumbers>() {
|
|
806
|
});
|
|
807
|
} catch (RestClientException e) {
|
|
808
|
throw e;
|
|
809
|
}
|
|
810
|
|
|
811
|
return resp.getBody();
|
|
812
|
}
|
|
813
|
|
|
814
|
private String getOpenAIREId(String repoId) {
|
|
815
|
|
|
816
|
if (repoId != null && repoId.contains("::")) {
|
|
817
|
return repoId.split("::")[0] + "::" + DigestUtils.md5Hex(repoId.split("::")[1]);
|
|
818
|
}
|
|
819
|
|
|
820
|
return null;
|
|
821
|
}
|
|
822
|
|
|
823
|
|
|
824
|
}
|