|
1
|
package eu.dnetlib.data.mapreduce.hbase.broker.enrich;
|
|
2
|
|
|
3
|
import java.io.IOException;
|
|
4
|
import java.util.List;
|
|
5
|
import java.util.stream.Collectors;
|
|
6
|
|
|
7
|
import com.google.common.collect.Lists;
|
|
8
|
import com.google.common.collect.Streams;
|
|
9
|
import eu.dnetlib.data.mapreduce.hbase.broker.*;
|
|
10
|
import eu.dnetlib.data.mapreduce.hbase.broker.model.EventWrapper;
|
|
11
|
import eu.dnetlib.data.mapreduce.util.DedupUtils;
|
|
12
|
import eu.dnetlib.data.proto.OafProtos.Oaf;
|
|
13
|
import org.apache.commons.lang.StringUtils;
|
|
14
|
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
|
|
15
|
import org.dom4j.DocumentException;
|
|
16
|
|
|
17
|
import static eu.dnetlib.data.mapreduce.util.OafHbaseUtils.getKey;
|
|
18
|
|
|
19
|
/**
|
|
20
|
* Created by claudio on 08/07/16.
|
|
21
|
*/
|
|
22
|
public class EnrichmentReducer extends AbstractEnrichmentReducer {
|
|
23
|
|
|
24
|
@Override
|
|
25
|
protected String counterGroup() {
|
|
26
|
return "Broker Enrichment";
|
|
27
|
}
|
|
28
|
|
|
29
|
@Override
|
|
30
|
protected void reduce(final ImmutableBytesWritable key, final Iterable<ImmutableBytesWritable> values, final Context context) throws IOException,
|
|
31
|
InterruptedException {
|
|
32
|
|
|
33
|
try {
|
|
34
|
generateEvents(Streams.stream(values)
|
|
35
|
.limit(LIMIT)
|
|
36
|
.map(EnrichmentReducer::toOaf)
|
|
37
|
.collect(Collectors.toList()), context);
|
|
38
|
} catch (final DocumentException e) {
|
|
39
|
throw new RuntimeException(e);
|
|
40
|
}
|
|
41
|
}
|
|
42
|
|
|
43
|
private void generateEvents(final List<Oaf> oafList, final Context context) throws IOException, InterruptedException, DocumentException {
|
|
44
|
|
|
45
|
for (final Oaf current : oafList) {
|
|
46
|
|
|
47
|
context.getCounter(counterGroup(), "entity type: " + current.getEntity().getResult().getMetadata().getResulttype().getClassid()).increment(1);
|
|
48
|
|
|
49
|
final String currentId = current.getEntity().getId();
|
|
50
|
|
|
51
|
final String currentDsId = StringUtils.substringAfter(getKey(current.getEntity().getCollectedfromList()), "|");
|
|
52
|
final String currentDsType = dsTypeMap.get(currentDsId);
|
|
53
|
|
|
54
|
// System.out.println(String.format("'%s' -> '%s'", currentDsId, currentDsType));
|
|
55
|
|
|
56
|
if (StringUtils.isBlank(currentDsType) && !dsWhitelist.contains(currentDsId)) {
|
|
57
|
context.getCounter("events skipped", "datasource type excluded").increment(1);
|
|
58
|
} else {
|
|
59
|
if (dsBlacklist.contains(currentDsId)) {
|
|
60
|
context.getCounter("events skipped", "datasource blacklisted").increment(1);
|
|
61
|
} else {
|
|
62
|
|
|
63
|
final List<EventWrapper> events = Lists.newArrayList();
|
|
64
|
for (final Oaf other : oafList) {
|
|
65
|
|
|
66
|
final String otherId = other.getEntity().getId();
|
|
67
|
if (!currentId.equals(otherId)) {
|
|
68
|
|
|
69
|
final float trust = similarity(current, other);
|
|
70
|
|
|
71
|
if (!DedupUtils.isRoot(current.getEntity().getId())) {
|
|
72
|
events.addAll(PIDEventFactory.process(current, other, trust));
|
|
73
|
events.addAll(OAVersionEventFactory.process(current, other, trust, untrustedOaDsList));
|
|
74
|
events.addAll(AbstractEventFactory.process(current, other, trust));
|
|
75
|
events.addAll(PublicationDateEventFactory.process(current, other, trust));
|
|
76
|
}
|
|
77
|
events.addAll(SubjectEventFactory.process(context, current, other, trust));
|
|
78
|
|
|
79
|
} else if (oafList.size() == 1) {
|
|
80
|
events.addAll(SubjectEventFactory.process(context, current));
|
|
81
|
}
|
|
82
|
}
|
|
83
|
emit(events, context);
|
|
84
|
}
|
|
85
|
}
|
|
86
|
}
|
|
87
|
}
|
|
88
|
|
|
89
|
}
|