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<header>
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<dri:objIdentifier>dedup_wf_001::5f6193e2becaf470c72443db26c09df9</dri:objIdentifier>
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<dri:dateOfCollection>2017-05-05T14:17:54.561Z</dri:dateOfCollection>
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<dri:dateOfTransformation>2017-08-25T13:23:57.14Z</dri:dateOfTransformation>
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<counters>
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<counter_publicationDataset value="7"/>
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<metadata>
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<oaf:entity
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xsi:schemaLocation="http://namespace.openaire.eu/oaf https://www.openaire.eu/schema/0.3/oaf-0.3.xsd">
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<oaf:result>
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<publisher>PeerJ Inc.</publisher>
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<language classid="eng" classname="English" schemeid="dnet:languages"
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schemename="dnet:languages"/>
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<journal issn="2167-8359" eissn="2167-8359" lissn="" ep="" iss="" sp="" vol="3"
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>PeerJ</journal>
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<description>Yeasts play an important role in the biology of the fruit fly,
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Drosophila melanogaster. In addition to being a valuable source of nutrition,
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yeasts affect D. melanogaster behavior and interact with the host immune system.
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Most experiments investigating the role of yeasts in D. melanogaster biology use
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the baker’s yeast, Saccharomyces cerevisiae. However, S. cerevisiae is rarely
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found with natural populations of D. melanogaster or other Drosophila species.
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Moreover, the strain of S. cerevisiae used most often in D. melanogaster
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experiments is a commercially and industrially important strain that, to the
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best of our knowledge, was not isolated from flies. Since disrupting natural
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host–microbe interactions can have profound effects on host biology, the results
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from D. melanogaster–S. cerevisiae laboratory experiments may not be fully
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representative of host–microbe interactions in nature. In this study, we explore
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the D. melanogaster-yeast relationship using five different strains of yeast
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that were isolated from wild Drosophila populations. Ingested live yeasts have
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variable persistence in the D. melanogaster gastrointestinal tract. For example,
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Hanseniaspora occidentalis persists relative to S. cerevisiae, while
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Brettanomyces naardenensis is removed. Despite these differences in persistence
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relative to S. cerevisiae, we find that all yeasts decrease in total abundance
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over time. Reactive oxygen species (ROS) are an important component of the D.
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melanogaster anti-microbial response and can inhibit S. cerevisiae growth in the
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intestine. To determine if sensitivity to ROS explains the differences in yeast
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persistence, we measured yeast growth in the presence and absence of hydrogen
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peroxide. We find that B. naardenesis is completely inhibited by hydrogen
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peroxide, while H. occidentalis is not, which is consistent with yeast
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sensitivity to ROS affecting persistence within the D. melanogaster
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gastrointestinal tract. We also compared the feeding preference of D.
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melanogaster when given the choice between a naturally associated yeast and S.
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cerevisiae. We do not find a correlation between preferred yeasts and those that
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persist in the intestine. Notably, in no instances is S. cerevisiae preferred
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over the naturally associated strains. Overall, our results show that D.
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melanogaster-yeast interactions are more complex than might be revealed in
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experiments that use only S. cerevisiae. We propose that future research utilize
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other yeasts, and especially those that are naturally associated with
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Drosophila, to more fully understand the role of yeasts in Drosophila biology.
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Since the genetic basis of host–microbe interactions is shared across taxa and
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since many of these genes are initially discovered in D. melanogaster, a more
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realistic fly-yeast model system will benefit our understanding of host–microbe
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interactions throughout the animal kingdom.</description>
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<title classid="main title" classname="main title" schemeid="dnet:dataCite_title"
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schemename="dnet:dataCite_title">Interactions between Drosophila and its natural
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yeast symbionts—Is Saccharomyces cerevisiae a good model for studying the
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fly-yeast relationship?</title>
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<resulttype classid="publication" classname="publication"
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schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Symbiosis</subject>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Yeast</subject>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Microbiology</subject>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Entomology</subject>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Mycology</subject>
|
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Ecology</subject>
|
90
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
|
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schemename="dnet:subject_classification_typologies">Medicine</subject>
|
93
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
|
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schemename="dnet:subject_classification_typologies">Host-microbe
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interactions</subject>
|
97
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Microbiota</subject>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">R</subject>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
|
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schemename="dnet:subject_classification_typologies">Baker’s yeast</subject>
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106
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Drosophila
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melanogaster</subject>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
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schemename="dnet:subject_classification_typologies">Saccharomyces
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cerevisiae</subject>
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<subject classid="keyword" classname="keyword"
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schemeid="dnet:subject_classification_typologies"
|
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schemename="dnet:subject_classification_typologies">Microbiome</subject>
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<source>PeerJ, Vol 3, p e1116 (2015)</source>
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<source>PeerJ</source>
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119
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<dateofacceptance>2015-08-01</dateofacceptance>
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<pid classid="doi" classname="doi" schemeid="dnet:pid_types"
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134
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schemename="dnet:pid_types">10.7717/peerj.1116</pid>
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135
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<pid classid="pmc" classname="pmc" schemeid="dnet:pid_types"
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136
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schemename="dnet:pid_types">PMC4556146</pid>
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<originalId>oai:doaj.org/article:8eb1718ccf7843a4a5d9a98c967c68c2</originalId>
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<originalId>oai:europepmc.org:3535765</originalId>
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<collectedfrom name="DOAJ-Articles"
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id="driver______::bee53aa31dc2cbb538c10c2b65fa5824"/>
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<collectedfrom name="Europe PubMed Central"
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id="opendoar____::8b6dd7db9af49e67306feb59a8bdc52c"/>
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<bestlicense classid="OPEN" classname="Open Access" schemeid="dnet:access_modes"
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schemename="dnet:access_modes"/>
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<context id="NSF" label="National Science Foundation" type="funding">
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<category id="NSF::Directorate for Biological Sciences"
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label="Directorate for Biological Sciences">
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<concept
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id="NSF::Directorate for Biological Sciences::Division of Integrative Organismal Systems"
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label="Division of Integrative Organismal Systems"/>
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</category>
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</context>
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<datainfo>
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<inferred>true</inferred>
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<deletedbyinference>false</deletedbyinference>
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<trust>0.9</trust>
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<inferenceprovenance>dedup-similarity-result</inferenceprovenance>
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<provenanceaction classid="sysimport:dedup" classname="sysimport:dedup"
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schemeid="dnet:provenanceActions" schemename="dnet:provenanceActions"/>
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</datainfo>
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<rels>
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inferenceprovenance="iis::document_referencedDatasets"
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provenanceaction="iis">
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>r37980778c78::c9e861e94903bc8ff837384c570068d0</to>
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<publisher>Figshare</publisher>
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<title classid="main title" classname="main title"
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schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title"
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170
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>Bacterial Communities of Diverse <em>Drosophila</em> Species:
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171
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Ecological Context of a Host–Microbe Model System</title>
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172
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<resulttype classid="dataset" classname="dataset"
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173
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schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
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174
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<dateofacceptance>2011-01-01</dateofacceptance>
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</rel>
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<rel inferred="true" trust="0.7348"
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inferenceprovenance="iis::document_referencedDatasets"
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provenanceaction="iis">
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<to class="isRelatedTo" scheme="dnet:result_result_relations" type="result"
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>r37980778c78::3abf018d4228c4443af8bd7c5fbcaed1</to>
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<publisher>Figshare</publisher>
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<title classid="main title" classname="main title"
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183
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schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title"
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|
><i>Saccharomyces cerevisiae</i> mitochondria are required for
|
185
|
optimal attractiveness to <i>Drosophila melanogaster</i></title>
|
186
|
<resulttype classid="dataset" classname="dataset"
|
187
|
schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
|
188
|
<dateofacceptance>2014-01-01</dateofacceptance>
|
189
|
</rel>
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190
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<rel inferred="true" trust="0.7348"
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inferenceprovenance="iis::document_referencedDatasets"
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provenanceaction="iis">
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<to class="isRelatedTo" scheme="dnet:result_result_relations" type="result"
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>r37980778c78::4d4a4d8e345c70ef30cfd51568b820f2</to>
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195
|
<publisher>Figshare</publisher>
|
196
|
<title classid="main title" classname="main title"
|
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|
schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title"
|
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|
><em>Drosophila</em> Regulate Yeast Density and Increase Yeast
|
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|
Community Similarity in a Natural Substrate</title>
|
200
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<resulttype classid="dataset" classname="dataset"
|
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|
schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
|
202
|
<dateofacceptance>2012-01-01</dateofacceptance>
|
203
|
</rel>
|
204
|
<rel inferred="true" trust="0.6148"
|
205
|
inferenceprovenance="iis::document_referencedDatasets"
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|
provenanceaction="iis">
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207
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<to class="isRelatedTo" scheme="dnet:result_result_relations" type="result"
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208
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>r37980778c78::58f63958f2c02db0646478a230030587</to>
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209
|
<publisher>Figshare</publisher>
|
210
|
<title classid="main title" classname="main title"
|
211
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schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title">Yeast
|
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Communities of Diverse Drosophila Species: Comparison of Two Symbiont
|
213
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Groups in the Same Hosts</title>
|
214
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<resulttype classid="dataset" classname="dataset"
|
215
|
schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
|
216
|
<dateofacceptance>2013-01-01</dateofacceptance>
|
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|
</rel>
|
218
|
<rel inferred="true" trust="0.7348"
|
219
|
inferenceprovenance="iis::document_referencedDatasets"
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provenanceaction="iis">
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|
<to class="isRelatedTo" scheme="dnet:result_result_relations" type="result"
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>r37980778c78::ad956f8e1257fdd1c21bdf06f40ae6ec</to>
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223
|
<publisher>Figshare</publisher>
|
224
|
<title classid="main title" classname="main title"
|
225
|
schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title">Impact
|
226
|
of the Resident Microbiota on the Nutritional Phenotype of
|
227
|
<em>Drosophila melanogaster</em></title>
|
228
|
<resulttype classid="dataset" classname="dataset"
|
229
|
schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
|
230
|
<dateofacceptance>2012-01-01</dateofacceptance>
|
231
|
</rel>
|
232
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<rel inferred="true" trust="0.7348"
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233
|
inferenceprovenance="iis::document_referencedDatasets"
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234
|
provenanceaction="iis">
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235
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<to class="isRelatedTo" scheme="dnet:result_result_relations" type="result"
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>r37980778c78::ba34d48e024dc31218ce5b0d0fb3e97c</to>
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237
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<publisher>Figshare</publisher>
|
238
|
<title classid="main title" classname="main title"
|
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|
schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title"
|
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|
>Quantifying Variation in the Ability of Yeasts to Attract <i>Drosophila
|
241
|
melanogaster</i></title>
|
242
|
<resulttype classid="dataset" classname="dataset"
|
243
|
schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
|
244
|
<dateofacceptance>2013-01-01</dateofacceptance>
|
245
|
</rel>
|
246
|
<rel inferred="true" trust="0.7348"
|
247
|
inferenceprovenance="iis::document_referencedDatasets"
|
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provenanceaction="iis">
|
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<to class="isRelatedTo" scheme="dnet:result_result_relations" type="result"
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>r37980778c78::87305c2a733558211129d80012e24609</to>
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251
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<publisher>Figshare</publisher>
|
252
|
<title classid="main title" classname="main title"
|
253
|
schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title">Host
|
254
|
Species and Environmental Effects on Bacterial Communities Associated
|
255
|
with <i>Drosophila</i> in the Laboratory and in the Natural
|
256
|
Environment</title>
|
257
|
<resulttype classid="dataset" classname="dataset"
|
258
|
schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
|
259
|
<dateofacceptance>2013-01-01</dateofacceptance>
|
260
|
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|
261
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inferenceprovenance="iis::document_referencedProjects"
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type="project">nsf_________::8f42432e412bcaa6a85115a79e726438</to>
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266
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<title>Convergent evolution of color patterns through changes in different
|
267
|
genes</title>
|
268
|
<code>1256420</code>
|
269
|
<contracttype classid="Continuing grant" classname="Continuing grant"
|
270
|
schemeid="nsf:contractTypes" schemename="NSF Contract Types"/>
|
271
|
<funding>
|
272
|
<funder id="nsf_________::NSF" shortname="NSF"
|
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|
name="National Science Foundation" jurisdiction="US"/>
|
274
|
<funding_level_0 name="Directorate for Biological Sciences"
|
275
|
>nsf_________::NSF::BIO/OAD</funding_level_0>
|
276
|
<funding_level_1 name="Division of Integrative Organismal Systems"
|
277
|
>nsf_________::NSF::BIO/OAD::BIO/IOS</funding_level_1>
|
278
|
</funding>
|
279
|
</rel>
|
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|
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provenanceaction="sysimport:crosswalk:repository">
|
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>dedup_wf_001::0fa4b2d2c455be37e5925ae6875b8943</to>
|
284
|
<ranking>2</ranking>
|
285
|
<fullname>Artyom Kopp</fullname>
|
286
|
</rel>
|
287
|
<rel inferred="true" trust="0.9" inferenceprovenance=""
|
288
|
provenanceaction="sysimport:crosswalk:repository">
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289
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<to class="hasAuthor" scheme="dnet:person_result_relations" type="person"
|
290
|
>doajarticles::07728761124aa0eaf132ab3ffc0034bf</to>
|
291
|
<ranking>1</ranking>
|
292
|
<fullname>Don Hoang</fullname>
|
293
|
</rel>
|
294
|
<rel inferred="true" trust="0.9" inferenceprovenance=""
|
295
|
provenanceaction="sysimport:crosswalk:repository">
|
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<to class="hasAuthor" scheme="dnet:person_result_relations" type="person"
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>dedup_wf_001::04f35bbc3246edce3d95ad6d6af04233</to>
|
298
|
<ranking>3</ranking>
|
299
|
<fullname>James Angus Chandler</fullname>
|
300
|
</rel>
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301
|
</rels>
|
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|
<children>
|
303
|
<result objidentifier="od_______908::a59ce9795d80ae8fc272323dc1cde83a">
|
304
|
<publisher>PeerJ Inc.</publisher>
|
305
|
<title classid="main title" classname="main title"
|
306
|
schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title"
|
307
|
>Interactions between Drosophila and its natural yeast symbionts—Is
|
308
|
Saccharomyces cerevisiae a good model for studying the fly-yeast
|
309
|
relationship?</title>
|
310
|
<resulttype classid="publication" classname="publication"
|
311
|
schemeid="dnet:result_typologies" schemename="dnet:result_typologies"/>
|
312
|
<dateofacceptance>2015-08-01</dateofacceptance>
|
313
|
</result>
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314
|
<result objidentifier="doajarticles::5f6193e2becaf470c72443db26c09df9">
|
315
|
<publisher>PeerJ Inc.</publisher>
|
316
|
<title classid="main title" classname="main title"
|
317
|
schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title"
|
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