Revision 54980
Added by Alessia Bardi about 5 years ago
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/deploy.info | ||
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{"type_source": "SVN", "goal": "package -U source:jar", |
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"url": "http://svn-public.driver.research-infrastructures.eu/driver/dnet45/modules/dnet-openaireplus-mapping-utils/branches/solr75", "deploy_repository": "dnet45-snapshots", "version": "4", "mail": "sandro.labruzzo@isti.cnr.it,michele.artini@isti.cnr.it, claudio.atzori@isti.cnr.it, alessia.bardi@isti.cnr.it", "deploy_repository_url": "http://maven.research-infrastructures.eu/nexus/content/repositories/dnet45-snapshots", "name": "dnet-openaireplus-mapping-utils_solr75"} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/openaire/exporter/model/ProjectTest.java | ||
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package eu.dnetlib.openaire.exporter.model; |
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import org.junit.Before; |
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import org.junit.Test; |
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import static org.junit.Assert.assertEquals; |
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public class ProjectTest { |
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Project pMZOS; |
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Project pFP7; |
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@Before |
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public void setUp() throws Exception { |
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pMZOS = new Project() |
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.setFunder("MZOS") |
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.setJurisdiction("HR") |
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.setFundingpathid("irb_hr______::MZOS") |
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.setAcronym("") |
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.setTitle("Project Title") |
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.setCode("115-1152437-2500") |
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.setStartdate("2007-01-01") |
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.setEnddate("2009-01-01"); |
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pFP7 = new Project() |
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.setFunder("EC") |
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.setJurisdiction("EU") |
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.setFundingpathid("ec__________::EC::FP7::SP1::NMP") |
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.setAcronym("REFFIBRE") |
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.setTitle("Project Title") |
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.setCode("604187") |
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.setStartdate("2013-11-01") |
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.setEnddate("20015-01-01"); |
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} |
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@Test |
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public void testIdNamespaceMZOS(){ |
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String ns = pMZOS.getIdnamespace(); |
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assertEquals("info:eu-repo/grantAgreement/MZOS//115-1152437-2500/HR", ns); |
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} |
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@Test |
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public void testIdNamespaceFP7(){ |
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String ns = pFP7.getIdnamespace(); |
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assertEquals("info:eu-repo/grantAgreement/EC/FP7/604187/EU", ns); |
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} |
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} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/openaire/exporter/model/ProjectDetailTest.java | ||
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package eu.dnetlib.openaire.exporter.model; |
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import java.io.IOException; |
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import java.io.StringReader; |
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import com.google.common.collect.Lists; |
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import org.apache.commons.io.IOUtils; |
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import org.springframework.core.io.ClassPathResource; |
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import org.springframework.core.io.Resource; |
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import static org.junit.Assert.assertEquals; |
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/** |
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* Created by claudio on 22/09/16. |
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*/ |
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public class ProjectDetailTest { |
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private Resource projectsCsv = new ClassPathResource("/eu/dnetlib/openaire/exporter/model/projectDetails.csv"); |
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private Resource projectsJson = new ClassPathResource("/eu/dnetlib/openaire/exporter/model/projectDetails.json"); |
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//@Test |
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public void testSerialisationCSV() throws IOException { |
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final String csv = IOUtils.toString(projectsCsv.getInputStream()); |
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doTest(csv, "csv"); |
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} |
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//@Test |
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public void testSerialisationCSV2() throws IOException { |
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final ProjectDetail p = new ProjectDetail() |
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.setAcronym("acro") |
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.setCode("01") |
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.setOptional1("op1") |
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.setOptional2("op2") |
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.setProjectId("project_01") |
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.setJsonextrainfo("extraInfo") |
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.setFundingPath(Lists.newArrayList("fundingpath1", "fundingpath2")); |
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doTest(p.asCSV(), "csv"); |
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} |
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//@Test |
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public void testSerialisationJSON() throws IOException { |
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final String json = IOUtils.toString(projectsJson.getInputStream()); |
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doTest(json, "json"); |
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} |
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private void doTest(final String data, final String format) throws IOException { |
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final StringReader reader = new StringReader(data); |
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for(String line : IOUtils.readLines(reader)) { |
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System.out.println("line: " + line); |
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ProjectDetail p; |
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String s = ""; |
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switch (format) { |
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case "csv": |
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p = ProjectDetail.fromCSV(line); |
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s = p.asCSV(); |
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break; |
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case "json": |
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p = ProjectDetail.fromJson(line); |
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s = p.asJson(); |
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break; |
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default: throw new IllegalArgumentException("invalid format: " + format); |
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} |
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System.out.println("serialisation: " + s); |
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assertEquals(s, line); |
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} |
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} |
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} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/mapreduce/util/OafDecoderTest.java | ||
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package eu.dnetlib.data.mapreduce.util; |
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import static org.junit.Assert.assertFalse; |
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import static org.junit.Assert.assertNotNull; |
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import java.util.List; |
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import org.junit.Test; |
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import eu.dnetlib.data.proto.KindProtos.Kind; |
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import eu.dnetlib.miscutils.functional.xml.IndentXmlString; |
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public class OafDecoderTest { |
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@Test |
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public void testAsXml() { |
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final OafDecoder decoder = OafTest.embed(OafTest.getResult("50|id_1"), Kind.entity); |
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assertNotNull(decoder); |
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assertNotNull(decoder.asXml()); |
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System.out.println(IndentXmlString.apply(decoder.asXml())); |
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} |
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} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/mapreduce/util/OafRowKeyDecoderTest.java | ||
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package eu.dnetlib.data.mapreduce.util; |
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import org.junit.Test; |
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public class OafRowKeyDecoderTest { |
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@Test |
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public void test() { |
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String id1 = "50|acnbad______::0a454baf9c61e63d42fb83ab549f8062"; |
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OafRowKeyDecoder d = OafRowKeyDecoder.decode(id1); |
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System.out.println(d.getId()); |
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} |
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} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/mapreduce/util/OafRelDecoderTest.java | ||
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package eu.dnetlib.data.mapreduce.util; |
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import eu.dnetlib.data.proto.DedupProtos.Dedup.RelName; |
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import eu.dnetlib.data.proto.OafProtos.OafRel; |
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import eu.dnetlib.data.proto.RelTypeProtos.RelType; |
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import eu.dnetlib.data.proto.RelTypeProtos.SubRelType; |
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import org.junit.Before; |
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import org.junit.Test; |
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import static org.junit.Assert.assertEquals; |
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import static org.junit.Assert.assertNotNull; |
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public class OafRelDecoderTest { |
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private OafRel oafRel; |
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@Before |
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public void setUp() { |
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oafRel = OafTest.getDedupRel("ID_1", "ID_2", RelType.resultResult, "isMergedIn"); |
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} |
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@Test |
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public void testSetClass() { |
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OafRelDecoder d1 = OafRelDecoder.decode(oafRel); |
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assertNotNull(d1); |
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assertEquals("isMergedIn", d1.getRelClass()); |
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OafRelDecoder d2 = OafRelDecoder.decode(d1.setClassId("isMergedIn").build()); |
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assertEquals("isMergedIn", d2.getRelClass()); |
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assertEquals("isMergedIn", d2.getRelMetadata().getSemantics().getClassid()); |
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assertEquals("isMergedIn", d2.getRelMetadata().getSemantics().getClassname()); |
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} |
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@Test |
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public void testGetCF() { |
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assertEquals("resultResult_dedup_isMergedIn", OafRelDecoder.getCFQ(RelType.resultResult, SubRelType.dedup, RelName.isMergedIn)); |
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assertEquals("resultResult_dedup_isMergedIn", OafRelDecoder.getCFQ(RelType.resultResult, SubRelType.dedup, "isMergedIn")); |
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} |
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} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/bulktag/CommunityConfigurationFactoryTest.java | ||
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package eu.dnetlib.data.bulktag; |
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import org.apache.commons.io.IOUtils; |
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import org.apache.commons.lang3.StringUtils; |
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import org.dom4j.DocumentException; |
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import org.junit.Before; |
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import org.junit.Test; |
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import java.io.IOException; |
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import static org.junit.Assert.assertEquals; |
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import static org.junit.Assert.assertTrue; |
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/** |
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* Created by miriam on 03/08/2018. |
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*/ |
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public class CommunityConfigurationFactoryTest { |
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private String xml; |
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@Before |
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public void setUp() throws IOException, DocumentException { |
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xml = IOUtils.toString(getClass().getResourceAsStream("community_configuration.xml")); |
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} |
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@Test |
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public void parseTest() throws DocumentException { |
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final CommunityConfiguration cc = CommunityConfigurationFactory.newInstance(xml); |
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assertEquals(5,cc.size()); |
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cc.getCommunityList().forEach(c -> assertTrue(StringUtils.isNoneBlank(c.getId()))); |
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} |
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} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/transform/ParserToProtoIT.java | ||
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package eu.dnetlib.data.transform; |
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import java.io.IOException; |
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import java.io.InputStream; |
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import java.io.StringReader; |
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import java.util.List; |
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import java.util.Objects; |
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import java.util.Properties; |
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import java.util.concurrent.atomic.AtomicInteger; |
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import java.util.function.Function; |
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import java.util.stream.Collectors; |
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import java.util.stream.StreamSupport; |
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import com.google.protobuf.InvalidProtocolBufferException; |
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import com.mongodb.client.MongoCollection; |
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import com.mongodb.client.MongoDatabase; |
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import eu.dnetlib.data.proto.OafProtos.Oaf; |
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import eu.dnetlib.data.proto.OafProtos.OafEntity; |
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import eu.dnetlib.data.transform.xml2.DatasetToProto; |
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import eu.dnetlib.miscutils.collections.Pair; |
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import eu.dnetlib.miscutils.datetime.HumanTime; |
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import org.apache.commons.io.IOUtils; |
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import org.apache.commons.lang3.time.StopWatch; |
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import org.apache.commons.logging.Log; |
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import org.apache.commons.logging.LogFactory; |
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import org.apache.commons.math.stat.descriptive.DescriptiveStatistics; |
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import org.bson.Document; |
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import org.dom4j.DocumentException; |
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import org.dom4j.io.SAXReader; |
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import org.junit.Before; |
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import org.junit.Test; |
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import org.junit.runner.RunWith; |
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import org.springframework.beans.factory.annotation.Autowired; |
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import org.springframework.test.context.ContextConfiguration; |
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import org.springframework.test.context.junit4.SpringJUnit4ClassRunner; |
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import static org.junit.Assert.assertFalse; |
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import static org.junit.Assert.assertNotNull; |
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import static org.junit.Assert.assertTrue; |
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@RunWith(SpringJUnit4ClassRunner.class) |
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@ContextConfiguration(classes = { ConfigurationTestConfig.class }) |
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public class ParserToProtoIT { |
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private static final Log log = LogFactory.getLog(ParserToProtoIT.class); |
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private static final String DATACITE = "datacite"; |
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private static final String NARCIS = "narcis"; |
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private static final int BATCH_SIZE = 10000; |
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private static final int LOG_FREQ = 5000; |
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private static final int LIMIT = 10000; |
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public static final String BODY = "body"; |
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private static String basePathProfiles = "/eu/dnetlib/test/profiles/TransformationRuleDSResources/TransformationRuleDSResourceType/"; |
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private int batchSize = BATCH_SIZE; |
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private int logFreq = LOG_FREQ; |
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private int limit = LIMIT; |
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@Autowired |
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private MongoDatabase db; |
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@Autowired() |
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private Properties testProperties; |
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@Before |
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public void setUp() { |
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logFreq = Integer.valueOf(testProperties.getProperty("test.logFreq", String.valueOf(LOG_FREQ))); |
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batchSize = Integer.valueOf(testProperties.getProperty("test.batchSize", String.valueOf(BATCH_SIZE))); |
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limit = Integer.valueOf(testProperties.getProperty("test.limit", String.valueOf(limit))); |
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} |
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@Test |
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public void testParseDataciteWithVTD() throws IOException { |
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doTest(s -> new Pair<>(s, new DatasetToProto().apply(s)), DATACITE); |
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} |
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@Test |
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public void testParseDataciteWithXSLT() throws IOException { |
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final String xslt = IOUtils.toString(loadFromTransformationProfile("odf2hbase.xml")); |
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final XsltRowTransformer transformer = XsltRowTransformerFactory.newInstance(xslt); |
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doTest(rowToOaf(transformer), DATACITE); |
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} |
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@Test |
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public void testParseNarcisWithXSLT() throws IOException { |
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final String xslt = IOUtils.toString(loadFromTransformationProfile("oaf2hbase.xml")); |
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final XsltRowTransformer transformer = XsltRowTransformerFactory.newInstance(xslt); |
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doTest(rowToOaf(transformer), NARCIS); |
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} |
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//// HELPERS |
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private void doTest(final Function<String, Pair<String, Oaf>> mapper, final String collectionName) { |
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final MongoCollection<Document> collection = db.getCollection(collectionName); |
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final long collectionSize = collection.count(); |
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log.info(String.format("found %s records in collection '%s'", collectionSize, collectionName)); |
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final AtomicInteger read = new AtomicInteger(0); |
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final DescriptiveStatistics stats = new DescriptiveStatistics(); |
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final StopWatch recordTimer = new StopWatch(); |
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final StopWatch totalTimer = StopWatch.createStarted(); |
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StreamSupport.stream(collection.find().batchSize(batchSize).spliterator(), false) |
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.limit(limit) |
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.peek(d -> { |
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if (read.addAndGet(1) % logFreq == 0) { |
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log.info(String.format("records read so far %s", read.get())); |
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//log.info(String.format("stats so far %s", stats.toString())); |
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} |
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}) |
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.map(d -> (String) d.get("body")) |
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.filter(Objects::nonNull) |
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.collect(Collectors.toList()) // load them in memory first |
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.stream() |
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.peek(s -> recordTimer.start()) |
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.map(mapper) |
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.forEach(pair -> { |
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recordTimer.stop(); |
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stats.addValue(recordTimer.getTime()); |
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recordTimer.reset(); |
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assertNotNull(pair); |
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assertTrue(pair.getValue().hasEntity()); |
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try { |
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final org.dom4j.Document doc = new SAXReader().read(new StringReader(pair.getKey())); |
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final OafEntity entity = pair.getValue().getEntity(); |
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//TODO add more asserts |
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assertTrue(entity.getId().contains(doc.valueOf("/*[local-name() = 'record']/*[local-name() = 'header']/*[local-name() = 'objIdentifier']/text()"))); |
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} catch (DocumentException e) { |
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throw new IllegalArgumentException("unable to parse record " + pair.getKey(), e); |
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} |
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}); |
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totalTimer.stop(); |
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log.info(String.format("processed %s/%s records in %s", read.get(), collectionSize, HumanTime.exactly(totalTimer.getTime()))); |
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log.info(stats.toString()); |
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} |
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private Function<String, Pair<String, Oaf>> rowToOaf(final XsltRowTransformer transformer) { |
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return xml -> { |
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final List<Row> rows = transformer.apply(xml); |
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if (rows.isEmpty()) { |
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return null; |
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} |
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return rows.stream() |
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.filter(row -> row.getColumn(BODY) != null) |
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.map(row -> row.getColumn(BODY)) |
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.map(c -> c.getValue()) |
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.map(b -> { |
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try { |
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return Oaf.parseFrom(b); |
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} catch (InvalidProtocolBufferException e) { |
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throw new IllegalStateException(e); |
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} |
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}) |
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.filter(Objects::nonNull) |
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.map(oaf -> new Pair<>(xml, oaf)) |
|
168 |
.findFirst() |
|
169 |
.get(); |
|
170 |
}; |
|
171 |
} |
|
172 |
|
|
173 |
private InputStream loadFromTransformationProfile(final String profilePath) { |
|
174 |
log.info("Loading xslt from: " + basePathProfiles + profilePath); |
|
175 |
InputStream profile = getClass().getResourceAsStream(basePathProfiles + profilePath); |
|
176 |
SAXReader saxReader = new SAXReader(); |
|
177 |
org.dom4j.Document doc = null; |
|
178 |
try { |
|
179 |
doc = saxReader.read(profile); |
|
180 |
} catch (DocumentException e) { |
|
181 |
e.printStackTrace(); |
|
182 |
throw new RuntimeException(e); |
|
183 |
} |
|
184 |
String xslt = doc.selectSingleNode("//SCRIPT/CODE/*[local-name()='stylesheet']").asXML(); |
|
185 |
//log.info(xslt); |
|
186 |
return IOUtils.toInputStream(xslt); |
|
187 |
} |
|
188 |
|
|
189 |
|
|
190 |
} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/transform/xml/OpenTrialsXsltFunctionsTest.java | ||
---|---|---|
1 |
package eu.dnetlib.data.transform.xml; |
|
2 |
|
|
3 |
import java.util.List; |
|
4 |
|
|
5 |
import eu.dnetlib.data.transform.xml.OpenTrialsXsltFunctions.JsonProv; |
|
6 |
import org.junit.After; |
|
7 |
import org.junit.Before; |
|
8 |
import org.junit.Test; |
|
9 |
|
|
10 |
import static org.junit.Assert.assertEquals; |
|
11 |
|
|
12 |
|
|
13 |
/** |
|
14 |
* OpenTrialsXsltFunctions Tester. |
|
15 |
* |
|
16 |
*/ |
|
17 |
public class OpenTrialsXsltFunctionsTest { |
|
18 |
|
|
19 |
private String jsonProv = "[{\"url\" : \"http://apps.who.int/trialsearch/Trial3.aspx?trialid=NCT00378508\", \"sourceID\" : \"77eb42c5-0ec7-4e31-963a-5736b66f2d26\", \"sourceName\" : \"ictrp\"},{\"url\" : \"https://www.clinicaltrials.gov/ct2/show/NCT00378508?lup_e=02%2F04%2F2016&lup_s=01%2F01%2F2001&rank=175075&resultsxml=true\", \"sourceID\" : \"b389497c-0833-432b-a09b-930526b7b4d4\", \"sourceName\" : \"nct\"}]"; |
|
20 |
private String jsonProvWithNull = "[{\"url\" : \"\", \"sourceID\" : \"77eb42c5-0ec7-4e31-963a-5736b66f2d26\", \"sourceName\" : \"ictrp\"},{\"url\" : \"https://www.clinicaltrials.gov/ct2/show/NCT00378508?lup_e=02%2F04%2F2016&lup_s=01%2F01%2F2001&rank=175075&resultsxml=true\", \"sourceID\" : \"b389497c-0833-432b-a09b-930526b7b4d4\", \"sourceName\" : \"nct\"}]"; |
|
21 |
private String jidentifiers = "{112683,NCT00920439}"; |
|
22 |
|
|
23 |
|
|
24 |
private String jsonRecord = "[{\"source_id\" : \"nct\", \"source_url\" : \"https://clinicaltrials.gov/ct2/show/NCT02321059\", \"is_primary\" : true},{\"source_id\" : \"ictrp\", \"source_url\" : \"http://apps.who.int/trialsearch/Trial3.aspx?trialid=NCT02321059\", \"is_primary\" : false}]"; |
|
25 |
private String jsonRecordNull = "[{\"source_id\" : \"nct\", \"source_url\" : \"https://clinicaltrials.gov/ct2/show/NCT02321059\"},{\"source_id\" : \"ictrp\", \"source_url\" : \"http://apps.who.int/trialsearch/Trial3.aspx?trialid=NCT02321059\", \"is_primary\" : false}]"; |
|
26 |
private String jsonRecordVoid = "[{\"source_id\" : \"\", \"source_url\" : \"\", \"is_primary\" : \"\"}]"; |
|
27 |
private String jsonRecondPrimary = "[{\"source_id\" : \"nct\", \"source_url\" : \"https://clinicaltrials.gov/ct2/show/NCT02321059\", \"is_primary\" : false},{\"source_id\" : \"ictrp\", \"source_url\" : \"http://apps.who.int/trialsearch/Trial3.aspx?trialid=NCT02321059\", \"is_primary\" : false}]"; |
|
28 |
|
|
29 |
private String jsonPeopleVoid ="[{\"person_name\" : null, \"person_id\" : null, \"person_role\" : null}]"; |
|
30 |
private String jsonPeopleOne = "[{\"person_name\" : \"Henk Verheul, M.D., PhD\", \"person_id\" : \"116438e9-f8b1-46e5-a1f8-20f851cab73c\", \"person_role\" : \"principal_investigator\"}]"; |
|
31 |
private String jsonPeopleMore = "[{\"person_name\" : \"Henk Verheul, M.D., PhD\", \"person_id\" : \"116438e9-f8b1-46e5-a1f8-20f851cab73c\", \"person_role\" : \"principal_investigator\"},{\"person_name\" : \"Miriam Pippolippo Baglioni, PhD\", \"person_id\" : \"fake\", \"person_role\" : \"principal_investigator\"}]"; |
|
32 |
|
|
33 |
private String jsonOrganizationVoid = "[{\"organization_name\" : null, \"organization_id\" : null, \"organization_role\" : null}]"; |
|
34 |
private String jsonOrganizationOne = "[{\"organization_name\" : \"Södertälje sjukhus AB\", \"organization_id\" : \"15f0d004-b82b-408c-8605-38a57352468d\", \"organization_role\" : \"sponsor\"}]"; |
|
35 |
private String jsonOrganizationMore = "[{\"organization_name\" : \"Södertälje sjukhus AB\", \"organization_id\" : \"15f0d004-b82b-408c-8605-38a57352468d\", \"organization_role\" : \"sponsor\"},{\"organization_name\" : \"Miriam Baglioni AB\", \"organization_id\" : \"fake\", \"organization_role\" : \"primary_sponsor\"}]"; |
|
36 |
|
|
37 |
private String jsonLocationVoid = "[{\"location_name\" : null}]"; |
|
38 |
private String jsonLocationOne = "[{\"location_name\" : \"China\"}]"; |
|
39 |
private String jsonLocationMore = "[{\"location_name\" : \"China\"},{\"location_name\" : \"North Korea\"}]"; |
|
40 |
|
|
41 |
@Before |
|
42 |
public void before() throws Exception { |
|
43 |
} |
|
44 |
|
|
45 |
@After |
|
46 |
public void after() throws Exception { |
|
47 |
} |
|
48 |
|
|
49 |
/** |
|
50 |
* Method: getProvs(String jsonProvList) |
|
51 |
*/ |
|
52 |
@Test |
|
53 |
public void testGetProvs() throws Exception { |
|
54 |
List<JsonProv> list = OpenTrialsXsltFunctions.getProvs(jsonProv); |
|
55 |
assertEquals(2, list.size()); |
|
56 |
} |
|
57 |
|
|
58 |
/** |
|
59 |
* Method: getMainIdentifierURL(String jsonProvList) |
|
60 |
*/ |
|
61 |
@Test |
|
62 |
public void testGetMainIdentifierURL() throws Exception { |
|
63 |
String url = OpenTrialsXsltFunctions.getMainIdentifierURL(jsonProv); |
|
64 |
assertEquals( "http://apps.who.int/trialsearch/Trial3.aspx?trialid=NCT00378508", url ); |
|
65 |
url = OpenTrialsXsltFunctions.getMainIdentifierURL(jsonProvWithNull); |
|
66 |
assertEquals("https://www.clinicaltrials.gov/ct2/show/NCT00378508?lup_e=02%2F04%2F2016&lup_s=01%2F01%2F2001&rank=175075&resultsxml=true", url); |
|
67 |
} |
|
68 |
|
|
69 |
@Test |
|
70 |
public void testGetPrimaryRecordUrl(){ |
|
71 |
String url = OpenTrialsXsltFunctions.getPrimaryRecordUrl(jsonRecord); |
|
72 |
assertEquals("https://clinicaltrials.gov/ct2/show/NCT02321059", url); |
|
73 |
} |
|
74 |
|
|
75 |
@Test |
|
76 |
public void testGetPrimaryRecordID(){ |
|
77 |
String id = OpenTrialsXsltFunctions.getPrimaryRecordIdentifier(jsonRecord); |
|
78 |
assertEquals("nct", id); |
|
79 |
} |
|
80 |
|
|
81 |
@Test |
|
82 |
public void testGetPrimaryRecordUrlNull(){ |
|
83 |
String url = OpenTrialsXsltFunctions.getPrimaryRecordUrl(jsonRecordNull); |
|
84 |
assertEquals("https://clinicaltrials.gov/ct2/show/NCT02321059", url); |
|
85 |
} |
|
86 |
|
|
87 |
@Test |
|
88 |
public void testGetPrimaryRecordUrlVoid(){ |
|
89 |
String url = OpenTrialsXsltFunctions.getPrimaryRecordUrl(jsonRecordVoid); |
|
90 |
assertEquals("", url); |
|
91 |
} |
|
92 |
|
|
93 |
@Test |
|
94 |
public void testGetPrimaryRecordUrlNoPrimary(){ |
|
95 |
String url = OpenTrialsXsltFunctions.getPrimaryRecordUrl(jsonRecondPrimary); |
|
96 |
assertEquals("https://clinicaltrials.gov/ct2/show/NCT02321059", url); |
|
97 |
} |
|
98 |
@Test |
|
99 |
public void testGetPrimaryRecordIDNoPrimary(){ |
|
100 |
String id = OpenTrialsXsltFunctions.getPrimaryRecordIdentifier(jsonRecondPrimary); |
|
101 |
assertEquals("nct", id); |
|
102 |
} |
|
103 |
@Test |
|
104 |
public void testGetPrincipalInvestigatorsVoid(){ |
|
105 |
String url = OpenTrialsXsltFunctions.getPrincipalInvestigators(jsonPeopleVoid); |
|
106 |
assertEquals("",url); |
|
107 |
} |
|
108 |
|
|
109 |
|
|
110 |
@Test |
|
111 |
public void testGetPrincipalInvestigatorsOne(){ |
|
112 |
String url = OpenTrialsXsltFunctions.getPrincipalInvestigators(jsonPeopleOne); |
|
113 |
assertEquals("Verheul, Henk", url); |
|
114 |
} |
|
115 |
|
|
116 |
@Test |
|
117 |
public void testGetPrincipalInvestigatorsMore(){ |
|
118 |
String url = OpenTrialsXsltFunctions.getPrincipalInvestigators(jsonPeopleMore); |
|
119 |
assertEquals("Verheul, Henk@@Baglioni, Miriam Pippolippo", url); |
|
120 |
} |
|
121 |
|
|
122 |
|
|
123 |
|
|
124 |
@Test |
|
125 |
public void testgGetTrialOrganizationsVoid(){ |
|
126 |
String url = OpenTrialsXsltFunctions.getTrialOrganizations(jsonOrganizationVoid); |
|
127 |
assertEquals("",url); |
|
128 |
} |
|
129 |
|
|
130 |
|
|
131 |
@Test |
|
132 |
public void testgGetTrialOrganizationsOne(){ |
|
133 |
String url = OpenTrialsXsltFunctions.getTrialOrganizations(jsonOrganizationOne); |
|
134 |
assertEquals("Södertälje sjukhus AB@sponsor", url); |
|
135 |
} |
|
136 |
|
|
137 |
@Test |
|
138 |
public void testgGetTrialOrganizationsMore(){ |
|
139 |
String url = OpenTrialsXsltFunctions.getTrialOrganizations(jsonOrganizationMore); |
|
140 |
assertEquals("Södertälje sjukhus AB@sponsor@@Miriam Baglioni AB@sponsor", url); |
|
141 |
} |
|
142 |
|
|
143 |
@Test |
|
144 |
public void testgGetTrialLocationsVoid(){ |
|
145 |
String url = OpenTrialsXsltFunctions.getTrialLocations(jsonLocationVoid); |
|
146 |
assertEquals("",url); |
|
147 |
} |
|
148 |
|
|
149 |
|
|
150 |
@Test |
|
151 |
public void testgGetTrialLocationsOne(){ |
|
152 |
String url = OpenTrialsXsltFunctions.getTrialLocations(jsonLocationOne); |
|
153 |
assertEquals("China", url); |
|
154 |
} |
|
155 |
|
|
156 |
@Test |
|
157 |
public void testgGetTrialLocationsMore(){ |
|
158 |
String url = OpenTrialsXsltFunctions.getTrialLocations(jsonLocationMore); |
|
159 |
assertEquals("China@@North Korea", url); |
|
160 |
} |
|
161 |
|
|
162 |
@Test |
|
163 |
public void testGetNotPrimaryRecordUrlPrimary(){ |
|
164 |
String url = OpenTrialsXsltFunctions.getNotPrimaryRecordUrl(jsonRecondPrimary); |
|
165 |
assertEquals("http://apps.who.int/trialsearch/Trial3.aspx?trialid=NCT02321059", url); |
|
166 |
} |
|
167 |
|
|
168 |
@Test |
|
169 |
public void testGetNotPrimaryRecordUrlVoid(){ |
|
170 |
String url = OpenTrialsXsltFunctions.getNotPrimaryRecordUrl(jsonRecordVoid); |
|
171 |
assertEquals("", url); |
|
172 |
} |
|
173 |
|
|
174 |
@Test |
|
175 |
public void testGetNotPrimaryRecordUrl(){ |
|
176 |
String url = OpenTrialsXsltFunctions.getNotPrimaryRecordUrl(jsonRecord); |
|
177 |
assertEquals("http://apps.who.int/trialsearch/Trial3.aspx?trialid=NCT02321059", url); |
|
178 |
} |
|
179 |
|
|
180 |
|
|
181 |
} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/transform/xml/FWFXsltFunctionsTest.java | ||
---|---|---|
1 |
package eu.dnetlib.data.transform.xml; |
|
2 |
|
|
3 |
import org.junit.After; |
|
4 |
import org.junit.Before; |
|
5 |
import org.junit.Test; |
|
6 |
|
|
7 |
import static org.junit.Assert.assertEquals; |
|
8 |
import static org.junit.Assert.assertNotNull; |
|
9 |
|
|
10 |
/** |
|
11 |
* |
|
12 |
* Created by miriam on 04/05/2017. |
|
13 |
*/ |
|
14 |
public class FWFXsltFunctionsTest { |
|
15 |
private String namesurname ="Gerhard SOMMER"; |
|
16 |
private String noSurname = "Gerhard"; |
|
17 |
private String noName = "SOMMER"; |
|
18 |
private String twoNames = "Gerhard Pippo SOMMER"; |
|
19 |
private String twoSurname = "Gerhard PIPPO SOMMER"; |
|
20 |
private String nonamesurname = ""; |
|
21 |
private String organization ="Universität Linz - Institut für Computational Perception; Universität für Musik und darstellende Kunst Graz - Institut 1: Komposition, Musiktheorie, Musikgeschichte und Dirigieren; Universität Mozarteum Salzburg - Institut für Musikalische Rezeptions- und Interpretationsgeschichte; Anton Bruckner Privatuniversität - Institut für Theorie und Geschichte der Musik; Eliette und Herbert von Karajan Institut - Eliette und Herbert von Karajan Institut"; |
|
22 |
|
|
23 |
@Before |
|
24 |
public void before() throws Exception { |
|
25 |
} |
|
26 |
|
|
27 |
@After |
|
28 |
public void after() throws Exception { |
|
29 |
} |
|
30 |
|
|
31 |
@Test |
|
32 |
public void testGetNamesNameNoNameSurname() throws Exception { |
|
33 |
String ret = FWFXsltFunctions.getName(nonamesurname,true); |
|
34 |
assertEquals("",ret ); |
|
35 |
} |
|
36 |
|
|
37 |
@Test |
|
38 |
public void testGetNamesSurnameNoNameSurname() throws Exception { |
|
39 |
String ret = FWFXsltFunctions.getName(nonamesurname,false); |
|
40 |
assertEquals("",ret ); |
|
41 |
} |
|
42 |
|
|
43 |
@Test |
|
44 |
public void testGetNamesNameTwoSurname() throws Exception { |
|
45 |
String ret = FWFXsltFunctions.getName(twoSurname,true); |
|
46 |
assertEquals("Gerhard",ret ); |
|
47 |
} |
|
48 |
|
|
49 |
@Test |
|
50 |
public void testGetNamesSurnameTwoSurname() throws Exception { |
|
51 |
String ret = FWFXsltFunctions.getName(twoSurname,false); |
|
52 |
assertEquals("PIPPO SOMMER",ret ); |
|
53 |
} |
|
54 |
|
|
55 |
@Test |
|
56 |
public void testGetNamesNameTwoNames() throws Exception { |
|
57 |
String ret = FWFXsltFunctions.getName(twoNames,true); |
|
58 |
assertEquals("Gerhard Pippo",ret ); |
|
59 |
} |
|
60 |
|
|
61 |
@Test |
|
62 |
public void testGetNamesSurnameTwoNames() throws Exception { |
|
63 |
String ret = FWFXsltFunctions.getName(twoNames,false); |
|
64 |
assertEquals("SOMMER",ret ); |
|
65 |
} |
|
66 |
|
|
67 |
/** |
|
68 |
* Method: getProvs(String jsonProvList) |
|
69 |
*/ |
|
70 |
@Test |
|
71 |
public void testGetNamesName() throws Exception { |
|
72 |
String ret = FWFXsltFunctions.getName(namesurname,true); |
|
73 |
assertEquals("Gerhard",ret ); |
|
74 |
} |
|
75 |
|
|
76 |
@Test |
|
77 |
public void testGetNamesSurname() throws Exception { |
|
78 |
String ret = FWFXsltFunctions.getName(namesurname,false); |
|
79 |
assertEquals("SOMMER",ret ); |
|
80 |
} |
|
81 |
|
|
82 |
@Test |
|
83 |
public void testGetNamesNameNoSurname() throws Exception { |
|
84 |
String ret = FWFXsltFunctions.getName(noSurname,true); |
|
85 |
assertEquals("Gerhard",ret ); |
|
86 |
} |
|
87 |
|
|
88 |
@Test |
|
89 |
public void testGetNamesSurnameNoSurname() throws Exception { |
|
90 |
String ret = FWFXsltFunctions.getName(noSurname,false); |
|
91 |
assertEquals("",ret ); |
|
92 |
} |
|
93 |
|
|
94 |
@Test |
|
95 |
public void testGetNamesNameNoName() throws Exception { |
|
96 |
String ret = FWFXsltFunctions.getName(noName,true); |
|
97 |
assertEquals("",ret ); |
|
98 |
} |
|
99 |
|
|
100 |
@Test |
|
101 |
public void testGetNamesSurnameNoName() throws Exception { |
|
102 |
String ret = FWFXsltFunctions.getName(noName,false); |
|
103 |
assertEquals("SOMMER",ret ); |
|
104 |
} |
|
105 |
|
|
106 |
@Test |
|
107 |
public void TestGetMd5()throws Exception{ |
|
108 |
String md5 = FWFXsltFunctions.getMd5(organization); |
|
109 |
System.out.println(md5); |
|
110 |
assertNotNull(md5); |
|
111 |
} |
|
112 |
|
|
113 |
} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/transform/xml2/VtdParserToProtoTest.java | ||
---|---|---|
1 |
package eu.dnetlib.data.transform.xml2; |
|
2 |
|
|
3 |
import java.io.IOException; |
|
4 |
import java.util.function.Function; |
|
5 |
|
|
6 |
import eu.dnetlib.data.proto.OafProtos.Oaf; |
|
7 |
import org.apache.commons.io.IOUtils; |
|
8 |
import org.apache.commons.logging.Log; |
|
9 |
import org.apache.commons.logging.LogFactory; |
|
10 |
import org.junit.Test; |
|
11 |
|
|
12 |
import static org.junit.Assert.assertNotNull; |
|
13 |
|
|
14 |
public class VtdParserToProtoTest { |
|
15 |
|
|
16 |
private static final Log log = LogFactory.getLog(VtdParserToProtoTest.class); |
|
17 |
|
|
18 |
@Test |
|
19 |
public void testParsePublication() throws IOException { |
|
20 |
doTest("/eu/dnetlib/data/transform/publication.xml", new PublicationToProto()); |
|
21 |
} |
|
22 |
|
|
23 |
@Test |
|
24 |
public void testParseDataset() throws IOException { |
|
25 |
doTest("/eu/dnetlib/data/transform/dataset.xml", new DatasetToProto()); |
|
26 |
} |
|
27 |
|
|
28 |
@Test |
|
29 |
public void testParseDataset2() throws IOException { |
|
30 |
doTest("/eu/dnetlib/data/transform/dataset2.xml", new DatasetToProto()); |
|
31 |
} |
|
32 |
|
|
33 |
private void doTest(final String filePath, Function<String, Oaf> f) throws IOException { |
|
34 |
final String xml = IOUtils.toString(getClass().getResourceAsStream(filePath)); |
|
35 |
|
|
36 |
assertNotNull(xml); |
|
37 |
|
|
38 |
final Oaf oaf = f.apply(xml); |
|
39 |
|
|
40 |
assertNotNull(oaf); |
|
41 |
|
|
42 |
log.info(oaf.toString()); |
|
43 |
} |
|
44 |
|
|
45 |
} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/transform/xml2/VtdUtilityParserTest.java | ||
---|---|---|
1 |
package eu.dnetlib.data.transform.xml2; |
|
2 |
|
|
3 |
import java.io.InputStream; |
|
4 |
import java.util.List; |
|
5 |
|
|
6 |
import com.ximpleware.AutoPilot; |
|
7 |
import com.ximpleware.VTDGen; |
|
8 |
import com.ximpleware.VTDNav; |
|
9 |
import eu.dnetlib.data.transform.xml2.Node; |
|
10 |
import eu.dnetlib.data.transform.xml2.VtdUtilityParser; |
|
11 |
import org.apache.commons.io.IOUtils; |
|
12 |
import org.junit.Assert; |
|
13 |
import org.junit.Test; |
|
14 |
|
|
15 |
import static eu.dnetlib.data.transform.xml2.VtdUtilityParser.parseXml; |
|
16 |
|
|
17 |
public class VtdUtilityParserTest { |
|
18 |
|
|
19 |
@Test |
|
20 |
public void testUtils1() { |
|
21 |
String xpath = VtdUtilityParser.xpath("a", "b", "c"); |
|
22 |
Assert.assertTrue("/*[local-name()='a']/*[local-name()='b']/*[local-name()='c']".equals(xpath)); |
|
23 |
} |
|
24 |
|
|
25 |
@Test |
|
26 |
public void testPartser() throws Exception { |
|
27 |
final InputStream resource = this.getClass().getResourceAsStream("/eu/dnetlib/data/transform/publication.xml"); |
|
28 |
final String record =IOUtils.toString(resource); |
|
29 |
final VTDGen vg = parseXml(record); |
|
30 |
final VTDNav vn = vg.getNav(); |
|
31 |
final AutoPilot ap = new AutoPilot(vn); |
|
32 |
|
|
33 |
List<Node> nodes = VtdUtilityParser.getNodes(ap, vn, "//*[local-name()='referenceaa']"); |
|
34 |
|
|
35 |
nodes.forEach(n -> Assert.assertTrue(n.getAttributes().keySet().size()>0)); |
|
36 |
|
|
37 |
System.out.println(VtdUtilityParser.countNodes(ap, vn, "count(//*[local-name()='CobjIdentifier'])")); |
|
38 |
|
|
39 |
|
|
40 |
|
|
41 |
|
|
42 |
} |
|
43 |
|
|
44 |
} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/transform/SolrProtoMapperTest.java | ||
---|---|---|
1 |
package eu.dnetlib.data.transform; |
|
2 |
|
|
3 |
import static org.junit.Assert.assertFalse; |
|
4 |
import static org.junit.Assert.assertNotNull; |
|
5 |
|
|
6 |
import java.io.IOException; |
|
7 |
import java.io.StringWriter; |
|
8 |
|
|
9 |
import org.apache.commons.codec.binary.Base64; |
|
10 |
import org.apache.commons.io.IOUtils; |
|
11 |
import org.apache.commons.logging.Log; |
|
12 |
import org.apache.commons.logging.LogFactory; |
|
13 |
import org.apache.solr.common.SolrInputDocument; |
|
14 |
import org.apache.solr.common.SolrInputField; |
|
15 |
import org.dom4j.DocumentException; |
|
16 |
import org.junit.Before; |
|
17 |
import org.junit.Test; |
|
18 |
|
|
19 |
import com.google.protobuf.InvalidProtocolBufferException; |
|
20 |
import com.googlecode.protobuf.format.JsonFormat; |
|
21 |
|
|
22 |
import eu.dnetlib.data.mapreduce.util.OafTest; |
|
23 |
import eu.dnetlib.data.proto.KindProtos.Kind; |
|
24 |
import eu.dnetlib.data.proto.OafProtos.Oaf; |
|
25 |
import eu.dnetlib.data.proto.OafProtos.OafEntity; |
|
26 |
import eu.dnetlib.functionality.index.solr.feed.InputDocumentFactory; |
|
27 |
|
|
28 |
public class SolrProtoMapperTest { |
|
29 |
|
|
30 |
private static final Log log = LogFactory.getLog(SolrProtoMapper.class); // NOPMD by marko on 11/24/08 5:02 PM |
|
31 |
private String fields; |
|
32 |
|
|
33 |
@Before |
|
34 |
public void setUp() throws IOException { |
|
35 |
final StringWriter sw = new StringWriter(); |
|
36 |
IOUtils.copy(getClass().getResourceAsStream("fields.xml"), sw); |
|
37 |
fields = sw.toString(); |
|
38 |
assertNotNull(fields); |
|
39 |
assertFalse(fields.isEmpty()); |
|
40 |
|
|
41 |
log.info(fields); |
|
42 |
} |
|
43 |
|
|
44 |
@Test |
|
45 |
public void testProto2SolrDocument() throws DocumentException, InvalidProtocolBufferException { |
|
46 |
final SolrProtoMapper mapper = new SolrProtoMapper(fields); |
|
47 |
|
|
48 |
assertNotNull(mapper); |
|
49 |
|
|
50 |
final OafEntity.Builder entity = OafTest.getResultBuilder("01"); |
|
51 |
entity.addChildren(OafTest.getResultBuilder("01_children")); |
|
52 |
|
|
53 |
final Oaf oaf = OafTest.embed(entity.build(), Kind.entity).getOaf(); |
|
54 |
|
|
55 |
assertNotNull(oaf.getEntity().getChildrenList()); |
|
56 |
assertFalse(oaf.getEntity().getChildrenList().isEmpty()); |
|
57 |
|
|
58 |
log.info("byte[] size: " + oaf.toByteArray().length); |
|
59 |
|
|
60 |
log.info("json size: " + JsonFormat.printToString(oaf).length()); |
|
61 |
|
|
62 |
log.info("base64 size: " + Base64.encodeBase64String(oaf.toByteArray()).length()); |
|
63 |
|
|
64 |
final byte[] decodeBase64 = Base64.decodeBase64(Base64.encodeBase64String(oaf.toByteArray())); |
|
65 |
|
|
66 |
log.info("decoded: " + JsonFormat.printToString(Oaf.parseFrom(decodeBase64))); |
|
67 |
|
|
68 |
final SolrInputDocument doc = mapper.map(oaf, InputDocumentFactory.getParsedDateField("2015-02-15"), "asd", "action-set"); |
|
69 |
|
|
70 |
assertNotNull(doc); |
|
71 |
|
|
72 |
for (final SolrInputField f : doc.values()) { |
|
73 |
log.info(f); |
|
74 |
} |
|
75 |
} |
|
76 |
} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/java/eu/dnetlib/data/transform/ConfigurationTestConfig.java | ||
---|---|---|
1 |
package eu.dnetlib.data.transform; |
|
2 |
|
|
3 |
import java.io.IOException; |
|
4 |
import java.io.InputStream; |
|
5 |
import java.util.Properties; |
|
6 |
|
|
7 |
import com.mongodb.MongoClient; |
|
8 |
import com.mongodb.client.MongoDatabase; |
|
9 |
import org.springframework.context.annotation.Bean; |
|
10 |
import org.springframework.context.annotation.Configuration; |
|
11 |
import org.springframework.core.io.ClassPathResource; |
|
12 |
|
|
13 |
@Configuration |
|
14 |
public class ConfigurationTestConfig { |
|
15 |
|
|
16 |
@Bean |
|
17 |
public MongoDatabase db() throws IOException { |
|
18 |
|
|
19 |
final Properties p = testProperties(); |
|
20 |
|
|
21 |
final MongoClient mongo = new MongoClient( |
|
22 |
p.getProperty("mongodb.host"), |
|
23 |
Integer.valueOf(p.getProperty("mongodb.port"))); |
|
24 |
return mongo.getDatabase(p.getProperty("mongodb.dbname")); |
|
25 |
} |
|
26 |
|
|
27 |
@Bean |
|
28 |
public Properties testProperties() throws IOException { |
|
29 |
final Properties p = new Properties(); |
|
30 |
final ClassPathResource cp = new ClassPathResource("test.properties"); |
|
31 |
try (final InputStream stream = cp.getInputStream()) { |
|
32 |
p.load(stream); |
|
33 |
} |
|
34 |
return p; |
|
35 |
} |
|
36 |
|
|
37 |
} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/eu/dnetlib/openaire/exporter/model/projectDetails.json | ||
---|---|---|
1 |
{"projectId":"corda_______::200130","acronym":"SUPERCOMPETITORS","code":"200130","optional1":"ERC-SG","optional2":"http://erc.europa.eu","jsonextrainfo":"{}","fundingPath":["\u003cfundingtree\u003e\u003cfunder\u003e\u003cid\u003eec__________::EC\u003c/id\u003e\u003cshortname\u003eEC\u003c/shortname\u003e\u003cname\u003eEuropean Commission\u003c/name\u003e\u003cjurisdiction\u003eEU\u003c/jurisdiction\u003e\u003c/funder\u003e\u003cfunding_level_2\u003e\u003cid\u003eec__________::EC::FP7::SP2::ERC\u003c/id\u003e\u003cdescription\u003eERC\u003c/description\u003e\u003cname\u003eERC\u003c/name\u003e\u003cclass\u003eec:program\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_1\u003e\u003cid\u003eec__________::EC::FP7::SP2\u003c/id\u003e\u003cdescription\u003eSP2-Ideas\u003c/description\u003e\u003cname\u003eSP2\u003c/name\u003e\u003cclass\u003eec:specificprogram\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_0\u003e\u003cid\u003eec__________::EC::FP7\u003c/id\u003e\u003cdescription\u003eSEVENTH FRAMEWORK PROGRAMME\u003c/description\u003e\u003cname\u003eFP7\u003c/name\u003e\u003cparent/\u003e\u003cclass\u003eec:frameworkprogram\u003c/class\u003e\u003c/funding_level_0\u003e\u003c/parent\u003e\u003c/funding_level_1\u003e\u003c/parent\u003e\u003c/funding_level_2\u003e\u003c/fundingtree\u003e"]} |
|
2 |
{"projectId":"corda_______::200141","acronym":"QUESPACE","code":"200141","optional1":"ERC-SG","optional2":"http://erc.europa.eu","jsonextrainfo":"{}","fundingPath":["\u003cfundingtree\u003e\u003cfunder\u003e\u003cid\u003eec__________::EC\u003c/id\u003e\u003cshortname\u003eEC\u003c/shortname\u003e\u003cname\u003eEuropean Commission\u003c/name\u003e\u003cjurisdiction\u003eEU\u003c/jurisdiction\u003e\u003c/funder\u003e\u003cfunding_level_2\u003e\u003cid\u003eec__________::EC::FP7::SP2::ERC\u003c/id\u003e\u003cdescription\u003eERC\u003c/description\u003e\u003cname\u003eERC\u003c/name\u003e\u003cclass\u003eec:program\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_1\u003e\u003cid\u003eec__________::EC::FP7::SP2\u003c/id\u003e\u003cdescription\u003eSP2-Ideas\u003c/description\u003e\u003cname\u003eSP2\u003c/name\u003e\u003cclass\u003eec:specificprogram\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_0\u003e\u003cid\u003eec__________::EC::FP7\u003c/id\u003e\u003cdescription\u003eSEVENTH FRAMEWORK PROGRAMME\u003c/description\u003e\u003cname\u003eFP7\u003c/name\u003e\u003cparent/\u003e\u003cclass\u003eec:frameworkprogram\u003c/class\u003e\u003c/funding_level_0\u003e\u003c/parent\u003e\u003c/funding_level_1\u003e\u003c/parent\u003e\u003c/funding_level_2\u003e\u003c/fundingtree\u003e"]} |
|
3 |
{"projectId":"corda_______::200165","acronym":"PROTEOMICS OF CHERNO","code":"200165","optional1":"MC-IRG","optional2":"http://cordis.europa.eu/fp7/people.htm","jsonextrainfo":"{}","fundingPath":["\u003cfundingtree\u003e\u003cfunder\u003e\u003cid\u003eec__________::EC\u003c/id\u003e\u003cshortname\u003eEC\u003c/shortname\u003e\u003cname\u003eEuropean Commission\u003c/name\u003e\u003cjurisdiction\u003eEU\u003c/jurisdiction\u003e\u003c/funder\u003e\u003cfunding_level_2\u003e\u003cid\u003eec__________::EC::FP7::SP3::PEOPLE\u003c/id\u003e\u003cdescription\u003eMarie-Curie Actions\u003c/description\u003e\u003cname\u003ePEOPLE\u003c/name\u003e\u003cclass\u003eec:program\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_1\u003e\u003cid\u003eec__________::EC::FP7::SP3\u003c/id\u003e\u003cdescription\u003eSP3-People\u003c/description\u003e\u003cname\u003eSP3\u003c/name\u003e\u003cclass\u003eec:specificprogram\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_0\u003e\u003cid\u003eec__________::EC::FP7\u003c/id\u003e\u003cdescription\u003eSEVENTH FRAMEWORK PROGRAMME\u003c/description\u003e\u003cname\u003eFP7\u003c/name\u003e\u003cparent/\u003e\u003cclass\u003eec:frameworkprogram\u003c/class\u003e\u003c/funding_level_0\u003e\u003c/parent\u003e\u003c/funding_level_1\u003e\u003c/parent\u003e\u003c/funding_level_2\u003e\u003c/fundingtree\u003e"]} |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/eu/dnetlib/openaire/exporter/model/projectDetails.csv | ||
---|---|---|
1 |
nih_________::3R01GM073898-02S1,,3R01GM073898-02S1,23188 $,,"{""orgname"":""UNIVERSITY OF CALIFORNIA SAN DIEGO"", ""activity"":""R01"", ""administeringic"":""GM"", ""serialnumber"":""73898"", ""coreprojectnum"":""R01GM073898""}","[""\u003cfundingtree\u003e\n \u003cfunder\u003e\n \u003cid\u003enih_________::NIH\u003c/id\u003e\n \u003cshortname\u003eNIH\u003c/shortname\u003e\n \u003cname\u003eNational Institutes of Health\u003c/name\u003e\n \u003cjurisdiction\u003eUS\u003c/jurisdiction\u003e\n \u003c/funder\u003e\n \u003cfunding_level_0\u003e\n \u003cid\u003enih_________::NIH::NATIONAL_INSTITUTE_OF_GENERAL_MEDICAL_SCIENCES\u003c/id\u003e\n \u003cname\u003eNATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES\u003c/name\u003e\n \u003cdescription\u003eNATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES\u003c/description\u003e\n \u003cparent/\u003e\n \u003cclass\u003enih:fundingStream\u003c/class\u003e\n \u003c/funding_level_0\u003e\n \u003c/fundingtree\u003e""]" |
|
2 |
corda_______::100202,RECOMP,100202,JTI-CP-ARTEMIS,http://cordis.europa.eu/fp7/home_en.html,{},"[""\u003cfundingtree\u003e\u003cfunder\u003e\u003cid\u003eec__________::EC\u003c/id\u003e\u003cshortname\u003eEC\u003c/shortname\u003e\u003cname\u003eEuropean Commission\u003c/name\u003e\u003cjurisdiction\u003eEU\u003c/jurisdiction\u003e\u003c/funder\u003e\u003cfunding_level_2\u003e\u003cid\u003eec__________::EC::FP7::SP1::SP1-JTI\u003c/id\u003e\u003cdescription\u003eJoint Technology Initiatives (Annex IV-SP1)\u003c/description\u003e\u003cname\u003eSP1-JTI\u003c/name\u003e\u003cclass\u003eec:program\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_1\u003e\u003cid\u003eec__________::EC::FP7::SP1\u003c/id\u003e\u003cdescription\u003eSP1-Cooperation\u003c/description\u003e\u003cname\u003eSP1\u003c/name\u003e\u003cclass\u003eec:specificprogram\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_0\u003e\u003cid\u003eec__________::EC::FP7\u003c/id\u003e\u003cdescription\u003eSEVENTH FRAMEWORK PROGRAMME\u003c/description\u003e\u003cname\u003eFP7\u003c/name\u003e\u003cparent/\u003e\u003cclass\u003eec:frameworkprogram\u003c/class\u003e\u003c/funding_level_0\u003e\u003c/parent\u003e\u003c/funding_level_1\u003e\u003c/parent\u003e\u003c/funding_level_2\u003e\u003c/fundingtree\u003e""]" |
|
3 |
corda__h2020::633080,MACC-III,633080,SPACE,SPACE,{},"[""\u003cfundingtree\u003e\u003cfunder\u003e\u003cid\u003eec__________::EC\u003c/id\u003e\u003cshortname\u003eEC\u003c/shortname\u003e\u003cname\u003eEuropean Commission\u003c/name\u003e\u003cjurisdiction\u003eEU\u003c/jurisdiction\u003e\u003c/funder\u003e\u003cfunding_level_1\u003e\u003cid\u003eec__________::EC::H2020::CSA\u003c/id\u003e\u003cdescription\u003eCoordination and support action\u003c/description\u003e\u003cname\u003eCSA\u003c/name\u003e\u003cclass\u003eec:h2020toas\u003c/class\u003e\u003cparent\u003e\u003cfunding_level_0\u003e\u003cid\u003eec__________::EC::H2020\u003c/id\u003e\u003cname\u003eH2020\u003c/name\u003e\u003cdescription\u003eHorizon 2020 Framework Programme\u003c/description\u003e\u003cparent/\u003e\u003cclass\u003eec:h2020fundings\u003c/class\u003e\u003c/funding_level_0\u003e\u003c/parent\u003e\u003c/funding_level_1\u003e\u003c/fundingtree\u003e""]" |
|
4 |
nsf_________::0000096,,0000096,,,{},"[""\u003cfundingtree\u003e\u003cfunder\u003e\u003cid\u003ensf_________::NSF\u003c/id\u003e\u003cshortname\u003eNSF\u003c/shortname\u003e\u003cname\u003eNational Science Foundation\u003c/name\u003e\u003cjurisdiction\u003eUS\u003c/jurisdiction\u003e\u003c/funder\u003e\u003cfunding_level_1\u003e\u003cid\u003ensf_________::NSF::OD::OD/OIA\u003c/id\u003e\u003cdescription\u003eOffice of Integrative Activities\u003c/description\u003e\u003cname\u003eOffice of Integrative Activities\u003c/name\u003e\u003cparent\u003e\u003cfunding_level_0\u003e\u003cid\u003ensf_________::NSF::OD\u003c/id\u003e\u003cdescription\u003eOffice of the Director\u003c/description\u003e\u003cname\u003eOffice of the Director\u003c/name\u003e\u003cparent/\u003e\u003cclass\u003ensf:fundingStream\u003c/class\u003e\u003c/funding_level_0\u003e\u003c/parent\u003e\u003c/funding_level_1\u003e\u003c/fundingtree\u003e""]" |
|
5 |
fct_________::100107,PTDC/SAU-ESA/100107/2008,100107,,,{},"[""\u003cfundingtree\u003e\u003cfunder\u003e\u003cid\u003efct_________::FCT\u003c/id\u003e\u003cshortname\u003eFCT\u003c/shortname\u003e\u003cname\u003eFundação para a Ciência e a Tecnologia, I.P.\u003c/name\u003e\u003cjurisdiction\u003ePT\u003c/jurisdiction\u003e\u003c/funder\u003e\u003cfunding_level_0\u003e\u003cid\u003efct_________::FCT::5876-PPCDTI\u003c/id\u003e\u003cdescription\u003e5876-PPCDTI\u003c/description\u003e\u003cname\u003e5876-PPCDTI\u003c/name\u003e\u003cparent/\u003e\u003cclass\u003efct:program\u003c/class\u003e\u003c/funding_level_0\u003e\u003c/fundingtree\u003e""]" |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/eu/dnetlib/data/bulktag/community_configuration.xml | ||
---|---|---|
1 |
<communities> |
|
2 |
<community id="fet-fp7"> |
|
3 |
<oacommunity/> |
|
4 |
<subjects/> |
|
5 |
<datasources/> |
|
6 |
<zenodocommunities/> |
|
7 |
</community> |
|
8 |
<community id="fet-h2020"> |
|
9 |
<subjects/> |
|
10 |
<datasources/> |
|
11 |
<zenodocommunities/> |
|
12 |
</community> |
|
13 |
<community id="oa-pg"> |
|
14 |
<subjects/> |
|
15 |
<datasources/> |
|
16 |
<zenodocommunities/> |
|
17 |
</community> |
|
18 |
<community id="ee"> |
|
19 |
<subjects> |
|
20 |
<subject>SDG13 - Climate action</subject> |
|
21 |
<subject>SDG8 - Decent work and economic growth</subject> |
|
22 |
<subject>SDG15 - Life on land</subject> |
|
23 |
<subject>SDG2 - Zero hunger</subject> |
|
24 |
<subject>SDG17 - Partnerships for the goals</subject> |
|
25 |
<subject>SDG10 - Reduced inequalities</subject> |
|
26 |
<subject>SDG5 - Gender equality</subject> |
|
27 |
<subject>SDG12 - Responsible consumption and production</subject> |
|
28 |
<subject>SDG14 - Life below water</subject> |
|
29 |
<subject>SDG6 - Clean water and sanitation</subject> |
|
30 |
<subject>SDG11 - Sustainable cities and communities</subject> |
|
31 |
<subject>SDG1 - No poverty</subject> |
|
32 |
<subject>SDG3 - Good health and well being</subject> |
|
33 |
<subject>SDG7 - Affordable and clean energy</subject> |
|
34 |
<subject>SDG4 - Quality education</subject> |
|
35 |
<subject>SDG9 - Industry innovation and infrastructure</subject> |
|
36 |
<subject>SDG16 - Peace justice and strong institutions</subject> |
|
37 |
</subjects> |
|
38 |
<datasources/> |
|
39 |
<zenodocommunities> |
|
40 |
<zenodocommunity> |
|
41 |
<zenodoid>123</zenodoid> |
|
42 |
<selcriteria>800A</selcriteria> |
|
43 |
</zenodocommunity> |
|
44 |
</zenodocommunities> |
|
45 |
</community> |
|
46 |
<community id="dh-ch"> |
|
47 |
<subjects/> |
|
48 |
<datasources/> |
|
49 |
<zenodocommunities/> |
|
50 |
</community> |
|
51 |
<community id="fam"> |
|
52 |
<subjects/> |
|
53 |
<datasources/> |
|
54 |
<zenodocommunities/> |
|
55 |
</community> |
|
56 |
<community id="ni"> |
|
57 |
<subjects> |
|
58 |
<subject>brain mapping</subject> |
|
59 |
<subject>brain imaging</subject> |
|
60 |
<subject>electroencephalography</subject> |
|
61 |
<subject>arterial spin labelling</subject> |
|
62 |
<subject>brain fingerprinting</subject> |
|
63 |
<subject>brain</subject> |
|
64 |
<subject>neuroimaging</subject> |
|
65 |
<subject>Multimodal Brain Image Analysis</subject> |
|
66 |
<subject>fMRI</subject> |
|
67 |
<subject>neuroinformatics</subject> |
|
68 |
<subject>fetal brain</subject> |
|
69 |
<subject>brain ultrasonic imaging</subject> |
|
70 |
<subject>topographic brain mapping</subject> |
|
71 |
<subject>diffusion tensor imaging</subject> |
|
72 |
<subject>computerized knowledge assessment</subject> |
|
73 |
<subject>connectome mapping</subject> |
|
74 |
<subject>brain magnetic resonance imaging</subject> |
|
75 |
<subject>brain abnormalities</subject> |
|
76 |
</subjects> |
|
77 |
<datasources> |
|
78 |
<datasource> |
|
79 |
<openaireId>re3data_____::5b9bf9171d92df854cf3c520692e9122</openaireId> |
|
80 |
<selcriteria/> |
|
81 |
</datasource> |
|
82 |
<datasource> |
|
83 |
<openaireId>doajarticles::c7d3de67dc77af72f6747157441252ec</openaireId> |
|
84 |
<selcriteria/> |
|
85 |
</datasource> |
|
86 |
<datasource> |
|
87 |
<openaireId>re3data_____::8515794670370f49c1d176c399c714f5</openaireId> |
|
88 |
<selcriteria/> |
|
89 |
</datasource> |
|
90 |
<datasource> |
|
91 |
<openaireId>doajarticles::d640648c84b10d425f96f11c3de468f3</openaireId> |
|
92 |
<selcriteria/> |
|
93 |
</datasource> |
|
94 |
<datasource> |
|
95 |
<openaireId>doajarticles::0c0e74daa5d95504eade9c81ebbd5b8a</openaireId> |
|
96 |
<selcriteria/> |
|
97 |
</datasource> |
|
98 |
</datasources> |
|
99 |
<zenodocommunities/> |
|
100 |
</community> |
|
101 |
<community id="mes"> |
|
102 |
<subjects> |
|
103 |
<subject>marine</subject> |
|
104 |
<subject>ocean</subject> |
|
105 |
<subject>fish</subject> |
|
106 |
<subject>aqua</subject> |
|
107 |
<subject>sea</subject> |
|
108 |
</subjects> |
|
109 |
<datasources> |
|
110 |
<datasource> |
|
111 |
<openaireId>re3data_____::9633d1e8c4309c833c2c442abeb0cfeb</openaireId> |
|
112 |
<selcriteria/> |
|
113 |
</datasource> |
|
114 |
</datasources> |
|
115 |
<zenodocommunities/> |
|
116 |
</community> |
|
117 |
<community id="aginfra"> |
|
118 |
<subjects> |
|
119 |
<subject>animal production and health</subject> |
|
120 |
<subject>fisheries and aquaculture</subject> |
|
121 |
<subject>food safety and human nutrition</subject> |
|
122 |
<subject>information management</subject> |
|
123 |
<subject>food technology</subject> |
|
124 |
<subject>agri-food education and extension</subject> |
|
125 |
<subject>natural resources and environment</subject> |
|
126 |
<subject>food system</subject> |
|
127 |
<subject>engineering technology and Research</subject> |
|
128 |
<subject>agriculture</subject> |
|
129 |
<subject>food safety risk assessment</subject> |
|
130 |
<subject>food security</subject> |
|
131 |
<subject>farming practices and systems</subject> |
|
132 |
<subject>plant production and protection</subject> |
|
133 |
<subject>agri-food economics and policy</subject> |
|
134 |
<subject>food distribution</subject> |
|
135 |
<subject>forestry</subject> |
|
136 |
</subjects> |
|
137 |
<datasources> |
|
138 |
<datasource> |
|
139 |
<openaireId>opendoar____::1a551829d50f1400b0dab21fdd969c04</openaireId> |
|
140 |
<selcriteria/> |
|
141 |
</datasource> |
|
142 |
<datasource> |
|
143 |
<openaireId>opendoar____::49af6c4e558a7569d80eee2e035e2bd7</openaireId> |
|
144 |
<selcriteria/> |
|
145 |
</datasource> |
|
146 |
<datasource> |
|
147 |
<openaireId>opendoar____::0266e33d3f546cb5436a10798e657d97</openaireId> |
|
148 |
<selcriteria/> |
|
149 |
</datasource> |
|
150 |
<datasource> |
|
151 |
<openaireId>opendoar____::fd4c2dc64ccb8496e6f1f94c85f30d06</openaireId> |
|
152 |
<selcriteria/> |
|
153 |
</datasource> |
|
154 |
<datasource> |
|
155 |
<openaireId>opendoar____::41bfd20a38bb1b0bec75acf0845530a7</openaireId> |
|
156 |
<selcriteria/> |
|
157 |
</datasource> |
|
158 |
<datasource> |
|
159 |
<openaireId>opendoar____::87ae6fb631f7c8a627e8e28785d9992d</openaireId> |
|
160 |
<selcriteria/> |
|
161 |
</datasource> |
|
162 |
</datasources> |
|
163 |
<zenodocommunities/> |
|
164 |
</community> |
|
165 |
<community id="clarin"> |
|
166 |
<oacommunity>oac_clarin</oacommunity> |
|
167 |
<subjects/> |
|
168 |
<datasources> |
|
169 |
<datasource> |
|
170 |
<openaireId>re3data_____::a507cdacc5bbcc08761c92185dee5cab</openaireId> |
|
171 |
<selcriteria/> |
|
172 |
</datasource> |
|
173 |
</datasources> |
|
174 |
<zenodocommunities/> |
|
175 |
</community> |
|
176 |
</communities> |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/eu/dnetlib/data/transform/dataset.xml | ||
---|---|---|
1 |
<?xml version="1.0" encoding="UTF-8"?> |
|
2 |
<record xmlns:dr="http://www.driver-repository.eu/namespace/dr" |
|
3 |
xmlns:oaf="http://namespace.openaire.eu/oaf" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> |
|
4 |
<oai:header xmlns="http://namespace.openaire.eu/" |
|
5 |
xmlns:dc="http://purl.org/dc/elements/1.1/" |
|
6 |
xmlns:dri="http://www.driver-repository.eu/namespace/dri" |
|
7 |
xmlns:oai="http://www.openarchives.org/OAI/2.0/" xmlns:prov="http://www.openarchives.org/OAI/2.0/provenance"> |
|
8 |
<dri:objIdentifier>r37b0ad08687::00066f8025c9f9c99eaf3bba41e0ee0b</dri:objIdentifier> |
|
9 |
<dri:recordIdentifier>10.5281/zenodo.11877</dri:recordIdentifier> |
|
10 |
<dri:dateOfCollection>2018-04-30T02:17:56.67Z</dri:dateOfCollection> |
|
11 |
<oaf:datasourceprefix>r37b0ad08687</oaf:datasourceprefix> |
|
12 |
<identifier xmlns="http://www.openarchives.org/OAI/2.0/">oai:zenodo.org:11877</identifier> |
|
13 |
<datestamp xmlns="http://www.openarchives.org/OAI/2.0/">2017-05-30T02:33:14Z</datestamp> |
|
14 |
<setSpec xmlns="http://www.openarchives.org/OAI/2.0/">user-dighl</setSpec> |
|
15 |
<setSpec xmlns="http://www.openarchives.org/OAI/2.0/">openaire_data</setSpec> |
|
16 |
<setSpec xmlns="http://www.openarchives.org/OAI/2.0/">user-zenodo</setSpec> |
|
17 |
<dr:dateOfTransformation>2018-04-30T02:21:21.245Z</dr:dateOfTransformation> |
|
18 |
</oai:header> |
|
19 |
<metadata> |
|
20 |
<resource xmlns="http://datacite.org/schema/kernel-3" |
|
21 |
xmlns:dc="http://purl.org/dc/elements/1.1/" |
|
22 |
xmlns:dri="http://www.driver-repository.eu/namespace/dri" |
|
23 |
xmlns:oai="http://www.openarchives.org/OAI/2.0/" |
|
24 |
xmlns:prov="http://www.openarchives.org/OAI/2.0/provenance" xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd"> |
|
25 |
<identifier identifierType="DOI">10.5281/zenodo.11877</identifier> |
|
26 |
<alternateIdentifiers xmlns="http://www.openarchives.org/OAI/2.0/"> |
|
27 |
<alternateIdentifier alternateIdentifierType="URL">http://dx.doi.org/10.5281/zenodo.11877</alternateIdentifier> |
|
28 |
</alternateIdentifiers> |
|
29 |
<creators> |
|
30 |
<creator> |
|
31 |
<creatorName>Johann-Mattis List</creatorName> |
|
32 |
</creator> |
|
33 |
</creators> |
|
34 |
<titles> |
|
35 |
<title>Supplementary Material For "Sequence Comparison In Historical Linguistics"</title> |
|
36 |
</titles> |
|
37 |
<publisher>Zenodo</publisher> |
|
38 |
<publicationYear>2014</publicationYear> |
|
39 |
<subjects> |
|
40 |
<subject>historical linguistics</subject> |
|
41 |
<subject>phonetic alignment</subject> |
|
42 |
<subject>cognate detection</subject> |
|
43 |
<subject>computational linguistics</subject> |
|
44 |
</subjects> |
|
45 |
<dates> |
|
46 |
<date dateType="Issued">2014-09-26</date> |
|
47 |
</dates> |
|
48 |
<resourceType resourceTypeGeneral="Dataset"/> |
|
49 |
<relatedIdentifiers> |
|
50 |
<relatedIdentifier relatedIdentifierType="URL" relationType="IsSupplementTo">https://github.com/SequenceComparison/SupplementaryMaterial/tree/v1.0</relatedIdentifier> |
|
51 |
<relatedIdentifier relatedIdentifierType="DOI" relationType="IsPartOf">10.1038/nmeth.1502</relatedIdentifier> |
|
52 |
</relatedIdentifiers> |
|
53 |
<rightsList> |
|
54 |
<rights rightsURI="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0</rights> |
|
55 |
<rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights> |
|
56 |
</rightsList> |
|
57 |
<descriptions> |
|
58 |
<description descriptionType="Abstract"><p>This is the official version of the supplementary material which was used as the basis for the study on "Sequence Comparison in Historical Linguistics" (List, Dusseldorf, Dusseldorf University Press).</p></description> |
|
59 |
</descriptions> |
|
60 |
</resource> |
|
61 |
<dr:CobjCategory>0021</dr:CobjCategory> |
|
62 |
<oaf:dateAccepted>2014-01-01</oaf:dateAccepted> |
|
63 |
<oaf:accessrights>OPEN</oaf:accessrights> |
|
64 |
<oaf:language>und</oaf:language> |
|
65 |
<oaf:projectid>corda_______::609823</oaf:projectid> |
|
66 |
<oaf:hostedBy id="re3data_____::r3d100010468" name="Zenodo"/> |
|
67 |
<oaf:collectedFrom id="re3data_____::r3d100010468" name="Zenodo"/> |
|
68 |
</metadata> |
|
69 |
<about xmlns:dc="http://purl.org/dc/elements/1.1/" |
|
70 |
xmlns:dri="http://www.driver-repository.eu/namespace/dri" |
|
71 |
xmlns:oai="http://www.openarchives.org/OAI/2.0/" xmlns:prov="http://www.openarchives.org/OAI/2.0/provenance"> |
|
72 |
<provenance xmlns="http://www.openarchives.org/OAI/2.0/provenance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/provenance http://www.openarchives.org/OAI/2.0/provenance.xsd"> |
|
73 |
<originDescription altered="true" harvestDate="2018-04-30T02:17:56.67Z"> |
|
74 |
<baseURL>https://zenodo.org/oai2d</baseURL> |
|
75 |
<identifier>oai:zenodo.org:11877</identifier> |
|
76 |
<datestamp>2017-05-30T02:33:14Z</datestamp> |
|
77 |
<metadataNamespace/> |
|
78 |
</originDescription> |
|
79 |
</provenance> |
|
80 |
<oaf:datainfo> |
|
81 |
<oaf:inferred>false</oaf:inferred> |
|
82 |
<oaf:deletedbyinference>false</oaf:deletedbyinference> |
|
83 |
<oaf:trust>0.9</oaf:trust> |
|
84 |
<oaf:inferenceprovenance/> |
|
85 |
<oaf:provenanceaction classid="sysimport:crosswalk:datasetarchive" |
|
86 |
classname="sysimport:crosswalk:datasetarchive" |
|
87 |
schemeid="dnet:provenanceActions" schemename="dnet:provenanceActions"/> |
|
88 |
</oaf:datainfo> |
|
89 |
</about> |
|
90 |
</record> |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/eu/dnetlib/data/transform/fields.xml | ||
---|---|---|
1 |
<FIELDS> |
|
2 |
<FIELD name="oaftype" path="entity/type" tokenizable="false" indexable="true" stat="false" result="false"/> |
|
3 |
<FIELD name="objIdentifier" path="entity/id" tokenizable="false" indexable="true" stat="false" result="false"/> |
|
4 |
<FIELD name="collectedfrom" path="entity/collectedfrom/value" tokenizable="false" indexable="true" result="false" stat="false" /> |
|
5 |
<FIELD name="pid" path="entity/pid[qualifier#classid = {doi}]/value" tokenizable="false" stat="false" result="false" indexable="true"/> |
|
6 |
<FIELD name="deletedbyinference" path="dataInfo/deletedbyinference" tokenizable="false" stat="false" result="false" indexable="true"/> |
|
7 |
<FIELD name="inferred" path="dataInfo/inferred" tokenizable="false" stat="false" result="false" indexable="true"/> |
|
8 |
|
|
9 |
<!-- ORGANIZATION FIELDS --> |
|
10 |
<FIELD name="organizationlegalname" path="entity/organization/metadata/legalname/value" type="ngramtext" stat="false" indexable="true" result="false"/> |
|
11 |
<FIELD name="organizationlegalshortname" path="entity/organization/metadata/legalshortname/value" type="ngramtext" stat="false" indexable="true" result="false"/> |
|
12 |
<FIELD name="organizationwebsiteurl" path="entity/organization/metadata/websiteurl/value" stat="false" indexable="true" result="false"/> |
|
13 |
|
|
14 |
<!-- RESULT FIELDS --> |
|
15 |
<FIELD name="resulttitle" path="entity/result/metadata/title/value | entity/children/result/metadata/title/value" stat="false" result="false" indexable="true"/> |
|
16 |
<FIELD name="resultdescription" path="entity/result/metadata/description/value" result="false" indexable="true" stat="false"/> |
|
17 |
<FIELD name="resultauthor" path="entity/result/metadata/author/fullname | entity/children/result/metadata/author" result="false" indexable="true" stat="false"/> |
|
18 |
|
|
19 |
</FIELDS> |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/eu/dnetlib/data/transform/dataset2.xml | ||
---|---|---|
1 |
<?xml version="1.0" encoding="UTF-8"?> |
|
2 |
<record xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:oaf="http://namespace.openaire.eu/oaf" xmlns:dr="http://www.driver-repository.eu/namespace/dr"> |
|
3 |
<oai:header xmlns:oai="http://www.openarchives.org/OAI/2.0/" xmlns:dri="http://www.driver-repository.eu/namespace/dri" xmlns="http://namespace.openaire.eu/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:prov="http://www.openarchives.org/OAI/2.0/provenance"> |
|
4 |
<dri:objIdentifier>datacite____::002bdf21f586e0ea61e992e4724cb8f5</dri:objIdentifier> |
|
5 |
<dri:recordIdentifier>oai:oai.datacite.org:6750738</dri:recordIdentifier> |
|
6 |
<dri:dateOfCollection>2018-03-24T20:16:13.537Z</dri:dateOfCollection> |
|
7 |
<oaf:datasourceprefix>datacite____</oaf:datasourceprefix> |
|
8 |
<identifier xmlns="http://www.openarchives.org/OAI/2.0/">oai:oai.datacite.org:6750738</identifier> |
|
9 |
<datestamp xmlns="http://www.openarchives.org/OAI/2.0/">2018-03-09T23:51:56Z</datestamp> |
|
10 |
<setSpec xmlns="http://www.openarchives.org/OAI/2.0/">CDL</setSpec> |
|
11 |
<setSpec xmlns="http://www.openarchives.org/OAI/2.0/">CDL.CULIS</setSpec> |
|
12 |
<dr:dateOfTransformation>2018-05-12T21:23:38.227Z</dr:dateOfTransformation> |
|
13 |
</oai:header> |
|
14 |
<metadata> |
|
15 |
<resource xmlns="http://datacite.org/schema/kernel-3" xmlns:dri="http://www.driver-repository.eu/namespace/dri" xmlns:oai="http://www.openarchives.org/OAI/2.0/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:prov="http://www.openarchives.org/OAI/2.0/provenance" xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd"> |
|
16 |
<identifier identifierType="DOI">10.7916/D8BV7FXW</identifier> |
|
17 |
<alternateIdentifiers xmlns="http://www.openarchives.org/OAI/2.0/"> |
|
18 |
<alternateIdentifier alternateIdentifierType="URL">http://dx.doi.org/10.7916/D8BV7FXW</alternateIdentifier> |
|
19 |
</alternateIdentifiers> |
|
20 |
<titles> |
|
21 |
<title> Is H+3 cooling ever important in primordial gas?</title> |
|
22 |
</titles> |
|
23 |
<publisher>Columbia University</publisher> |
|
24 |
<publicationYear>2009</publicationYear> |
|
25 |
<dates> |
|
26 |
<date dateType="Created">2017-06-27</date> |
|
27 |
<date dateType="Updated">2018-02-17</date> |
|
28 |
</dates> |
|
29 |
<creators> |
|
30 |
<creator> |
|
31 |
<creatorName>Glover, S. C. O.</creatorName> |
|
32 |
</creator> |
|
33 |
<creator> |
|
34 |
<creatorName>Savin, Daniel Wolf</creatorName> |
|
35 |
</creator> |
|
36 |
</creators> |
|
37 |
<subjects> |
|
38 |
<subject>Astrophysics</subject> |
|
39 |
<subject>Plasma (Ionized gases)</subject> |
|
40 |
<subject>Physics</subject> |
|
41 |
<subject>Microphysics</subject> |
|
42 |
</subjects> |
|
43 |
<resourceType resourceTypeGeneral="Dataset">Data</resourceType> |
|
44 |
<descriptions> |
|
45 |
<description descriptionType="Abstract">Full tables of " Is H+3 cooling ever important in primordial gas?".</description> |
|
46 |
</descriptions> |
|
47 |
<relatedIdentifiers> |
|
48 |
<relatedIdentifier relatedIdentifierType="ISSN" relationType="IsPartOf">1365-2966</relatedIdentifier> |
|
49 |
<relatedIdentifier relatedIdentifierType="ISBN" relationType="IsPartOf"/> |
|
50 |
<relatedIdentifier relatedIdentifierType="DOI" relationType="IsVariantFormOf">10.1111/j.1365-2966.2008.14156.x</relatedIdentifier> |
|
51 |
</relatedIdentifiers> |
|
52 |
</resource> |
|
53 |
<dr:CobjCategory>0021</dr:CobjCategory> |
|
54 |
<oaf:dateAccepted>2009-01-01</oaf:dateAccepted> |
|
55 |
<oaf:accessrights>UNKNOWN</oaf:accessrights> |
|
56 |
<oaf:language>und</oaf:language> |
|
57 |
<oaf:hostedBy name="Unknown Repository" id="openaire____::1256f046-bf1f-4afc-8b47-d0b147148b18"/> |
|
58 |
<oaf:collectedFrom name="Datacite" id="openaire____::datacite"/> |
|
59 |
</metadata> |
|
60 |
<about xmlns:dri="http://www.driver-repository.eu/namespace/dri" xmlns:oai="http://www.openarchives.org/OAI/2.0/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:prov="http://www.openarchives.org/OAI/2.0/provenance"> |
|
61 |
<provenance xmlns="http://www.openarchives.org/OAI/2.0/provenance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/provenance http://www.openarchives.org/OAI/2.0/provenance.xsd"> |
|
62 |
<originDescription harvestDate="2018-03-24T20:16:13.537Z" altered="true"> |
|
63 |
<baseURL>https://oai.datacite.org/oai</baseURL> |
|
64 |
<identifier>oai:oai.datacite.org:6750738</identifier> |
|
65 |
<datestamp>2018-03-09T23:51:56Z</datestamp> |
|
66 |
<metadataNamespace/> |
|
67 |
</originDescription> |
|
68 |
</provenance> |
|
69 |
<oaf:datainfo> |
|
70 |
<oaf:inferred>false</oaf:inferred> |
|
71 |
<oaf:deletedbyinference>false</oaf:deletedbyinference> |
|
72 |
<oaf:trust>0.9</oaf:trust> |
|
73 |
<oaf:inferenceprovenance/> |
|
74 |
<oaf:provenanceaction schemename="dnet:provenanceActions" schemeid="dnet:provenanceActions" classname="sysimport:crosswalk:datasetarchive" classid="sysimport:crosswalk:datasetarchive"/> |
|
75 |
</oaf:datainfo> |
|
76 |
</about> |
|
77 |
</record> |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/eu/dnetlib/data/transform/simpleRecord.xml | ||
---|---|---|
1 |
<?xml version="1.0" encoding="UTF-8"?> |
|
2 |
<record> |
|
3 |
<metadata> |
|
4 |
<a>A text value</a> |
|
5 |
<b attr="attribute value"/> |
|
6 |
</metadata> |
|
7 |
</record> |
modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/eu/dnetlib/data/transform/publication.xml | ||
---|---|---|
1 |
<?xml version="1.0" encoding="UTF-8"?> |
|
2 |
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<dc:description>The analysis of structure and dynamics of biomolecules is important for understanding their function. Toward this aim, we introduce a method called 'switchable FRET', which combines single-molecule fluorescence resonance energy transfer (FRET) with reversible photoswitching of fluorophores. Typically, single-molecule FRET is measured within a single donor-acceptor pair and reports on only one distance. Although multipair FRET approaches that monitor multiple distances have been developed, they are technically challenging and difficult to extend, mainly because of their reliance on spectrally distinct acceptors. In contrast, switchable FRET sequentially probes FRET between a single donor and spectrally identical photoswitchable acceptors, dramatically reducing the experimental and analytical complexity and enabling direct monitoring of multiple distances. Our experiments on DNA molecules, a protein-DNA complex and dynamic Holliday junctions demonstrate the potential of switchable FRET for studying dynamic, multicomponent biomolecules. </dc:description> |
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modules/dnet-openaireplus-mapping-utils/tags/dnet-openaireplus-mapping-utils-6.2.22-solr75/src/test/resources/test.properties | ||
---|---|---|
1 |
mongodb.host = node5.t.openaire.research-infrastructures.eu |
|
2 |
mongodb.port = 27017 |
|
3 |
mongodb.dbname = test_ci |
|
4 |
test.limit = 10000 |
Also available in: Unified diff
[maven-release-plugin] copy for tag dnet-openaireplus-mapping-utils-6.2.22-solr75