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<RESOURCE_PROFILE>
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<HEADER>
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<RESOURCE_IDENTIFIER value="a4434d62-d4cd-4c73-a107-bc7c62e6f815_V29ya2Zsb3dEU1Jlc291cmNlcy9Xb3JrZmxvd0RTUmVzb3VyY2VUeXBl"/>
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<RESOURCE_TYPE value="WorkflowDSResourceType"/>
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<RESOURCE_KIND value="WorkflowDSResources"/>
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<RESOURCE_URI value=""/>
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<DATE_OF_CREATION value="2014-08-01T18:13:51.0Z"/>
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</HEADER>
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<BODY>
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<WORKFLOW_NAME>Data Provision</WORKFLOW_NAME>
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<WORKFLOW_TYPE>Data Provision</WORKFLOW_TYPE>
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<WORKFLOW_PRIORITY>30</WORKFLOW_PRIORITY>
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<CONFIGURATION start="manual">
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<!-- PREPARE NODES -->
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<NODE name="setInfo" type="SetFormatInfo" isStart="true">
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<DESCRIPTION>set mdformat, layout, interpretation</DESCRIPTION>
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<PARAMETERS>
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<PARAM name="format" type="string" managedBy="user" required="true">DMF</PARAM>
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<PARAM name="layout" type="string" managedBy="user" required="true">index</PARAM>
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<PARAM name="interpretation" type="string" managedBy="user" required="true">openaire</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="findIndex"/>
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</ARCS>
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</NODE>
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<NODE name="fetchRelClasses" type="FetchRelClasses" isStart="true">
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<DESCRIPTION/>
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<PARAMETERS>
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<PARAM name="relClassesProperty" type="string" managedBy="system" required="true">dnet.openaire.model.relclasses.xquery</PARAM>
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<PARAM name="relClassesName" type="string" managedBy="system" required="true">relClasses</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="groupEntities"/>
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</ARCS>
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</NODE>
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<NODE name="fetchContexts" type="LoadContextsJob" isStart="true">
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<DESCRIPTION/>
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<PARAMETERS/>
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<ARCS>
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<ARC to="groupEntities"/>
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</ARCS>
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</NODE>
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<NODE name="fetchEntityLinks" type="LoadEntityLinksJob" isStart="true">
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<DESCRIPTION/>
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<PARAMETERS/>
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<ARCS>
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<ARC to="groupEntities"/>
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</ARCS>
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</NODE>
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<!-- UPDATE INDEX -->
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<NODE name="findIndex" type="FindIndex">
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<DESCRIPTION/>
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<PARAMETERS/>
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<ARCS>
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<ARC name="found" to="prepareIndexing"/>
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<ARC name="notFound" to="createIndex"/>
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</ARCS>
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</NODE>
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<NODE name="createIndex" type="CreateIndex">
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<DESCRIPTION/>
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<PARAMETERS/>
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<ARCS>
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<ARC to="prepareIndexing"/>
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</ARCS>
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</NODE>
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<NODE name="prepareIndexing" type="PrepareIndexJob">
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<DESCRIPTION>Prepare indexing</DESCRIPTION>
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<PARAMETERS>
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<PARAM name="outputRecordsPathParam" type="string" managedBy="system" required="true">hdfsRecordsPath</PARAM>
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<PARAM name="rottenRecordsPathParam" type="string" managedBy="system" required="true">rottenRecordsPath</PARAM>
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<PARAM name="layoutToRecordStylesheet" type="string" managedBy="system" required="true">/eu/dnetlib/msro/openaireplus/workflows/index/openaireLayoutToRecordStylesheet.xsl</PARAM>
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<PARAM name="oafSchemaLocationProperty" type="string" managedBy="system" required="true">oaf.schema.location</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="cleanupXml"/>
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<ARC to="cleanupRotten"/>
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</ARCS>
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</NODE>
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<NODE name="cleanupXml" type="DeleteHdfsPathJob">
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<DESCRIPTION>hdfs cleanup (xml)</DESCRIPTION>
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<PARAMETERS>
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<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
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<PARAM required="true" type="string" name="envParams" managedBy="system">
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{
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'path' : 'hdfsRecordsPath'
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}
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</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="groupEntities"/>
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</ARCS>
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</NODE>
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<NODE name="cleanupRotten" type="DeleteHdfsPathJob">
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<DESCRIPTION>hdfs cleanup (rotten)</DESCRIPTION>
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<PARAMETERS>
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<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
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<PARAM required="true" type="string" name="envParams" managedBy="system">
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{
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'path' : 'rottenRecordsPath'
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}
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</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="groupEntities"/>
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</ARCS>
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</NODE>
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<NODE name="groupEntities" type="SubmitHadoopJob" isJoin="true">
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<DESCRIPTION>M/R group entities</DESCRIPTION>
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<PARAMETERS>
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<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
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<PARAM required="true" type="string" name="hadoopJob" managedBy="system">prepareIndexDataJob</PARAM>
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<PARAM required="true" type="string" name="sysParams" managedBy="system">
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{
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'hbase.mapred.inputtable' : 'hbase.mapred.datatable',
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'hbase.mapreduce.inputtable' : 'hbase.mapred.datatable'
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}
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</PARAM>
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<PARAM required="true" type="string" name="envParams" managedBy="system">
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{
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'mapred.output.dir' : 'hdfsRecordsPath',
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'index.entity.links' : 'index.entity.links',
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'oaf.schema.location' : 'oaf.schema.location',
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'contextmap' : 'contextmap',
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'relClasses' : 'relClasses'
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}
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</PARAM>
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<PARAM required="true" type="boolean" name="simulation" managedBy="user">false</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="updateIndex"/>
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<ARC to="prepareOAI"/>
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<ARC to="prepareStats"/>
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</ARCS>
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</NODE>
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<NODE name="updateIndex" type="SubmitHadoopJob">
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<DESCRIPTION>M/O index records</DESCRIPTION>
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<PARAMETERS>
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<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
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<PARAM required="true" type="string" name="hadoopJob" managedBy="system">indexFeedJob</PARAM>
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<PARAM required="true" type="string" name="envParams" managedBy="system">
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{
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'mapred.input.dir' : 'hdfsRecordsPath',
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145
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'mapred.output.dir' : 'rottenRecordsPath',
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146
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'index.xslt' : 'index.xslt',
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147
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'index.solr.url' : 'index.solr.url',
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'index.solr.collection' : 'index.solr.collection',
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'index.buffer.flush.threshold' : 'index.buffer.flush.threshold',
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'index.shutdown.wait.time' : 'index.shutdown.wait.time',
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'index.solr.sim.mode' : 'index.solr.sim.mode',
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'index.feed.timestamp' : 'index.feed.timestamp'
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}
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</PARAM>
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<PARAM required="true" type="boolean" name="simulation" managedBy="user">false</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="finalize"/>
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</ARCS>
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</NODE>
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<NODE name="finalize" type="FinalizeIndexFeeding">
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<DESCRIPTION>commit changes</DESCRIPTION>
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<PARAMETERS/>
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<ARCS>
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165
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<ARC to="updateDs"/>
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</ARCS>
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</NODE>
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<NODE name="updateDs" type="IndexDsUpdateJob">
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<DESCRIPTION>update DS</DESCRIPTION>
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<PARAMETERS/>
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<ARCS>
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<ARC to="waitAll"/>
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</ARCS>
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</NODE>
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<!-- UPDATE STATS -->
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<NODE name="prepareStats" type="PrepareStatsParams">
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<DESCRIPTION>set params for stats</DESCRIPTION>
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<PARAMETERS/>
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<ARCS>
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<ARC to="updateStats"/>
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</ARCS>
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</NODE>
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<NODE name="updateStats" type="SubmitHadoopJob">
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<DESCRIPTION>Update stats DB</DESCRIPTION>
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<PARAMETERS>
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<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
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<PARAM required="true" type="string" name="hadoopJob" managedBy="system">StatsExportJob</PARAM>
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<PARAM required="true" type="string" name="sysParams" managedBy="system">
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{
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'Stats_Hbase_Source_Table' : 'hbase.mapred.datatable'
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}
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</PARAM>
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<PARAM required="true" type="string" name="envParams" managedBy="system">
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{
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'nameNode' : 'nameNode',
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'jobTracker' : 'jobTracker',
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'isLookupEndpoint' : 'isLookupEndpoint',
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'Stats_indexConf' : 'index.entity.links'
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}
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</PARAM>
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<PARAM required="true" type="boolean" name="simulation" managedBy="user">false</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="waitAll"/>
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</ARCS>
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</NODE>
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<!-- OAI STORE UPDATE -->
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<NODE name="prepareOAI" type="PrepareOaiJob">
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<DESCRIPTION>Prepare target OAI store</DESCRIPTION>
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<PARAMETERS>
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<PARAM name="oaiDbName" type="string" managedBy="user" required="true">oaistore</PARAM>
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<PARAM name="oaiFormat" type="string" managedBy="user" required="true">oaf</PARAM>
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<PARAM name="oaiLayout" type="string" managedBy="user" required="true">index</PARAM>
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<PARAM name="oaiInterpretation" type="string" managedBy="user" required="true">openaire</PARAM>
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218
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<PARAM name="oaiSource" type="string" managedBy="user" required="false"></PARAM>
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<PARAM name="skipDuplicates" type="boolean" managedBy="user" required="true">true</PARAM>
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<PARAM name="duplicateXPath" type="string" managedBy="user" required="true">//*[local-name()='entity']//*[local-name()='datainfo']/*[local-name()='deletedbyinference'][./text() = 'true']</PARAM>
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</PARAMETERS>
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<ARCS>
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<ARC to="OAIDropStore" />
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</ARCS>
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</NODE>
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<NODE name="OAIDropStore" type="OAIDropStore">
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<DESCRIPTION>Drop the store: upserts are too expensive!</DESCRIPTION>
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<PARAMETERS/>
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<ARCS>
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230
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<ARC to="OAICreateStore"/>
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</ARCS>
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232
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</NODE>
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233
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<NODE name="OAICreateStore" type="OAICreateStore">
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234
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<DESCRIPTION/>
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235
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<PARAMETERS/>
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236
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<ARCS>
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237
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<ARC to="feedOAI"/>
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</ARCS>
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</NODE>
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240
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<NODE name="feedOAI" type="SubmitHadoopJob">
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241
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<DESCRIPTION>M/O oai feeding</DESCRIPTION>
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242
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<PARAMETERS>
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243
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<PARAM required="true" type="string" name="cluster" managedBy="system">DM</PARAM>
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244
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<PARAM required="true" type="string" name="hadoopJob" managedBy="system">oaiFeedJob</PARAM>
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245
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<PARAM required="true" type="string" name="envParams" managedBy="system">
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246
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{
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247
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'mapred.input.dir' : 'hdfsRecordsPath',
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248
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'services.publisher.oai.collection' : 'oai_collection',
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249
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'oaiConfiguration' : 'oai_configuration',
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250
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'oai.feed.date' : 'oai_actionDate',
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251
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'services.publisher.oai.db' : 'oai_dbName',
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252
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'services.publisher.oai.skipDuplicates':'oai_skipDuplicates',
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253
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'services.publisher.oai.duplicateXPath':'oai_duplicateXPath'
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254
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}
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255
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</PARAM>
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256
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<PARAM required="true" type="string" name="sysParams" managedBy="system">
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257
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{
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258
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'services.publisher.oai.host' : 'services.publisher.oai.host',
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259
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'services.publisher.oai.port' : 'services.publisher.oai.port'
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260
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}
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261
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</PARAM>
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262
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<PARAM required="true" type="boolean" name="simulation" managedBy="user">false</PARAM>
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263
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</PARAMETERS>
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264
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<ARCS>
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265
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<ARC to="CompoundIndexes"/>
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266
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</ARCS>
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267
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</NODE>
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268
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<NODE name="CompoundIndexes" type="OAICreateIndex">
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269
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<DESCRIPTION>Create composite indexes for the OAI store</DESCRIPTION>
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270
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<PARAMETERS>
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271
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<PARAM required="true" type="string" name="fieldNames" managedBy="user">set,resulttypeid;set,datestamp;license,oaftype;set,oaftype;oaftype,funder;resulttypeid,oaftype;oaftype,funding;resulttypeid,funder;resulttypeid,funding</PARAM>
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272
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</PARAMETERS>
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273
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<ARCS>
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274
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<ARC to="ConfigIndexes"/>
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275
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</ARCS>
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276
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</NODE>
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277
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<NODE name="ConfigIndexes" type="OAIEnsureIndexes">
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278
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<DESCRIPTION>Ensure an index exists on fields as specified in the configuration profile</DESCRIPTION>
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279
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<PARAMETERS/>
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280
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<ARCS>
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281
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<ARC to="SetsCount"/>
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282
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<ARC to="ConfigSets"/>
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283
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</ARCS>
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284
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</NODE>
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285
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<NODE name="SetsCount" type="OAISetsCountUpdate">
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286
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<DESCRIPTION>Count records in each OAI set, for each exported metadata format</DESCRIPTION>
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287
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<PARAMETERS>
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288
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<PARAM name="configuredOnly" type="boolean" managedBy="user" required="true">false</PARAM>
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289
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</PARAMETERS>
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290
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<ARCS>
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291
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<ARC to="waitAll"/>
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292
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</ARCS>
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293
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</NODE>
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294
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<NODE name="ConfigSets" type="OAIRefreshConfiguration">
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295
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<DESCRIPTION>Reads the current OAI configuration and upsert OAI sets accordingly (counts are updated as well)</DESCRIPTION>
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296
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<PARAMETERS>
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297
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</PARAMETERS>
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298
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<ARCS>
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299
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<ARC to="waitAll"/>
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300
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</ARCS>
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301
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</NODE>
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302
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<!-- WAIT FOR ALL THE WF BRANCHES TO COMPLETE -->
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303
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<NODE name="waitAll" isJoin="true">
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304
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<DESCRIPTION>wait for all the branches to complete</DESCRIPTION>
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305
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<PARAMETERS/>
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306
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<ARCS>
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307
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<ARC to="success"/>
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308
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</ARCS>
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309
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</NODE>
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310
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</CONFIGURATION>
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311
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<STATUS>
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312
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</STATUS>
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313
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</BODY>
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314
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</RESOURCE_PROFILE>
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