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package eu.dnetlib.msro.openaireplus.workflows.nodes.contexts;
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import java.io.StringReader;
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import java.lang.reflect.Type;
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import java.util.Map;
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import java.util.Map.Entry;
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import com.google.common.base.Function;
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import com.google.common.collect.Maps;
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import com.google.common.reflect.TypeToken;
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import com.google.gson.Gson;
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import org.apache.commons.lang.StringUtils;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.dom4j.*;
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import org.dom4j.io.SAXReader;
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/**
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* Created by claudio on 01/03/16.
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*/
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public class ContextUtils {
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private static final Log log = LogFactory.getLog(ContextUtils.class);
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private static final String DASHBOARD_VISIBILITY = "status";
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public static ContextDesc getContext(final Iterable<String> it,
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final String contextId,
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final String contextLabel,
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final String contextType,
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final String params, final String dashboardVisibility) throws
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DocumentException {
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final Map<String, String> paramMap = getParamMap(params);
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paramMap.put(DASHBOARD_VISIBILITY, dashboardVisibility);
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return new ContextUtils().getContextDesc(it, contextId, contextLabel, contextType, paramMap);
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}
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private static Map<String, String> getParamMap(String jsonMap) {
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Map<String, String> paramMap = Maps.newHashMap();
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if (StringUtils.isNotBlank(jsonMap)) {
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Type mapType = new TypeToken<Map<String, String>>() {
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}.getType();
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paramMap = new Gson().fromJson(jsonMap, mapType);
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}
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return paramMap;
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}
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private ContextDesc getContextDesc(final Iterable<String> it,
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final String contextId,
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final String contextLabel,
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final String contextType,
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final Map<String, String> params) throws
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DocumentException {
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final ContextDesc context = new ContextDesc(contextId, contextLabel, contextType, params);
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final SAXReader reader = new SAXReader();
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for (String s : it) {
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populateContext(context, reader, s);
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}
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return context;
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}
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private void populateContext(final ContextDesc context, final SAXReader reader, final String s) throws DocumentException {
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final Document doc = reader.read(new StringReader(s));
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for (Object o : doc.selectNodes("//fundingtree")) {
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final Element treeNode = (Element) o;
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final String funder = treeNode.valueOf("./funder/id");
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if (StringUtils.isBlank(funder)) {
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log.debug("No funder found, skipping population from the following XML: \n" + s);
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return;
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}
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if (!context.getDbEntries().containsKey(funder)) {
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log.info("Found funder: " + funder);
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context.getDbEntries().put(funder, "<fundingtree>" + treeNode.selectSingleNode("./funder").asXML() + "</fundingtree>");
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log.debug("db entry: " + context.getDbEntries().get(funder));
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}
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final String openaireId = treeNode.valueOf("./*[starts-with(local-name(),'funding_level_')]/id");
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if (!context.getDbEntries().containsKey(openaireId) && StringUtils.isNotBlank(openaireId)) {
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log.info("Found funding: " + openaireId);
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context.getDbEntries().put(openaireId, treeNode.asXML());
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log.debug("db entry: " + context.getDbEntries().get(openaireId));
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final Node node0 = treeNode.selectSingleNode(".//funding_level_0");
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if (node0 != null) {
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final ContextPart part = calculatePart(node0);
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if (context.getCategories().containsKey(part.getId())) {
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for (ContextPart p : part.getParts().values()) {
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context.getCategories().get(part.getId()).addPart(p);
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}
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} else {
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context.getCategories().put(part.getId(), part);
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}
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}
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}
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}
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}
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private ContextPart calculatePart(final Node node) {
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// final String newId = contextId + "::" + StringUtils.substringAfter(node.valueOf("./id"), "::");
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// ids are built as: nsPrefix :: funderID :: fundingLevel0ID :: etc etc, hence it seems we might not need the contextId parameter.
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final String newId = StringUtils.substringAfter(node.valueOf("./id"), "::");
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final ContextPart part = new ContextPart(newId, node.valueOf("./description"));
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part.getParams().put("name", node.valueOf("./name"));
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part.getParams().put("openaireId", node.valueOf("./id"));
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part.getParams().put("class", node.valueOf("./class"));
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final Element parent = node.getParent() != null ? node.getParent().getParent() : null;
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if (parent != null && parent.getName().startsWith("funding_level_")) {
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final ContextPart p = calculatePart(parent);
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part.getParts().put(p.getId(), p);
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}
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return part;
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}
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public static Function<Entry<String, String>, String> getContextRowTransformer() {
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return new Function<Entry<String, String>, String>() {
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private final SAXReader reader = new SAXReader();
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@Override
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public String apply(final Entry<String, String> e) {
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try {
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final Document docFundingPath = reader.read(new StringReader(e.getValue()));
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final Element root = DocumentHelper.createElement("ROWS");
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final Map<String, String> fundingFields = Maps.newLinkedHashMap();
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fundingFields.put("_dnet_resource_identifier_", e.getKey());
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fundingFields.put("id", e.getKey());
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fundingFields.put("path", e.getValue());
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fundingFields.put("jurisdiction", docFundingPath.valueOf("//funder/jurisdiction"));
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final String desc = docFundingPath.valueOf("(//*[starts-with(local-name(),'funding_level_')])[1]/description");
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if (StringUtils.isNotBlank(desc)) {
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fundingFields.put("description", desc);
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}
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final Map<String, String> orgFields = findFunderInfo(docFundingPath);
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final String orgId = orgFields.get("id");
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if (StringUtils.isNotBlank(orgId)) {
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addRow(root, "dsm_organizations", orgFields);
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fundingFields.put("funder", orgId);
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}
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addRow(root, "fundingpaths", fundingFields);
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if (log.isDebugEnabled()) {
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log.debug("Db entries: " + root.asXML());
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}
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return root.asXML();
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} catch (DocumentException e1) {
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log.error("Error parsing xml", e1);
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throw new RuntimeException("Error parsing xml", e1);
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}
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}
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private Map<String, String> findFunderInfo(final Document doc) {
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final Map<String, String> res = Maps.newLinkedHashMap();
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res.put("_dnet_resource_identifier_", doc.valueOf("//funder/id"));
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res.put("id", doc.valueOf("//funder/id"));
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res.put("legalshortname", doc.valueOf("//funder/shortname"));
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res.put("legalname", doc.valueOf("//funder/name"));
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res.put("country", doc.valueOf("//funder/jurisdiction"));
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return res;
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}
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private void addRow(final Element root, final String table, final Map<String, String> fields) {
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final Element row = root.addElement("ROW");
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row.addAttribute("table", table);
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for (Map.Entry<String, String> e : fields.entrySet()) {
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final Element pathField = row.addElement("FIELD");
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pathField.addAttribute("name", e.getKey());
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pathField.setText(e.getValue());
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}
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}
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};
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}
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}
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