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package eu.dnetlib.msro.workflows.nodes;
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import java.util.Calendar;
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import java.util.Map;
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import java.util.Set;
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import java.util.stream.Collectors;
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import org.apache.commons.lang3.StringUtils;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.springframework.beans.factory.annotation.Autowired;
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import eu.dnetlib.clients.pimpa.PimpaStubFactory;
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import eu.dnetlib.data.db.Affiliation;
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import eu.dnetlib.data.db.AffiliationsDao;
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import eu.dnetlib.msro.workflows.graph.Arc;
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import eu.dnetlib.msro.workflows.procs.Env;
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import eu.dnetlib.xml.ISTIUtilityFunction;
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public class PimpaUpdateJobNode extends SimpleJobNode {
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@Autowired
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private PimpaStubFactory pimpa;
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@Autowired
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private AffiliationsDao dao;
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private boolean overridePersons = false;
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private boolean overrideGroups = false;
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private boolean capitalizeFullnames = false;
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private static final Log log = LogFactory.getLog(PimpaUpdateJobNode.class);
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@Override
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protected String execute(final Env env) throws Exception {
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log.info("Reimport records from PIMPA - START");
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final Map<String, Boolean> oldPids = dao.getPersonIds().stream().collect(Collectors.toMap(s -> s, s -> true));
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final Map<String, Boolean> oldGids = dao.getGroupIds().stream().collect(Collectors.toMap(s -> s, s -> true));
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final Set<String> oldAffiliations = dao.listAffiliations().stream()
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.map(a -> String.format("%s#%s#%s", a.getPid(), a.getGid(), a.getYear()))
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.collect(Collectors.toSet());
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pimpa.getStub()
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.getDataRange(Affiliation.START_YEAR, Calendar.getInstance().get(Calendar.YEAR))
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.getYears()
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.forEach(y -> {
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y.getPersons().getList().forEach(p -> {
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if (StringUtils.isNotBlank(p.getCode())) {
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final String pid = "matricola:" + p.getCode().trim();
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if (!oldPids.containsKey(pid)) {
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dao.registerPerson(pid, String.format("%s %s", p.getName().trim(), p.getSurname().trim()));
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oldPids.put(pid, false);
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} else if (overridePersons && oldPids.get(pid)) {
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log.info("Overriding person " + pid);
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dao.updatePerson(pid, String.format("%s %s", p.getName().trim(), p.getSurname().trim()));
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oldPids.put(pid, false);
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}
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p.getLabs().getList().forEach(lab -> {
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if (StringUtils.isNotBlank(lab.getCode())) {
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if (!oldGids.containsKey(lab.getCode())) {
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dao.registerGroup(lab.getCode(), lab.getDescription(), lab.getType());
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oldGids.put(lab.getCode(), false);
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} else if (overrideGroups && oldGids.get(lab.getCode())) {
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log.info("Overriding group " + lab.getCode());
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dao.updateGroup(lab.getCode(), lab.getDescription(), lab.getType());
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oldGids.put(lab.getCode(), false);
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}
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if (!oldAffiliations.contains(String.format("%s#%s#%s", pid, lab.getCode(), y.getYear()))) {
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dao.registerAffiliation(pid, lab.getCode(), y.getYear());
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}
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}
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});
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}
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});
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});
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if (capitalizeFullnames) {
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log.info("Capitalizing person fullnames");
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dao.listPersons().forEach(p -> {
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dao.updatePerson(p.getId(), ISTIUtilityFunction.capitalize(p.getName()));
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});;
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}
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log.info("Reimport records from PIMPA - END");
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return Arc.DEFAULT_ARC;
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}
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public boolean isOverridePersons() {
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return overridePersons;
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}
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public void setOverridePersons(final boolean overridePersons) {
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this.overridePersons = overridePersons;
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}
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public boolean isOverrideGroups() {
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return overrideGroups;
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}
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public void setOverrideGroups(final boolean overrideGroups) {
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this.overrideGroups = overrideGroups;
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}
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public boolean isCapitalizeFullnames() {
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return capitalizeFullnames;
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}
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public void setCapitalizeFullnames(final boolean capitalizeFullnames) {
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this.capitalizeFullnames = capitalizeFullnames;
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}
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}
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