Revision 41197
Added by Argiro Kokogiannaki over 8 years ago
| ParsingClaimUtils.java | ||
|---|---|---|
| 226 | 226 |
buildContext(context); |
| 227 | 227 |
claim.setSource(context); |
| 228 | 228 |
} |
| 229 |
static public Context getConceptFromDMF( String xml) {
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Context context =new Context(); |
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try {
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DocumentBuilderFactory dbFactory = DocumentBuilderFactory.newInstance(); |
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DocumentBuilder dBuilder = dbFactory.newDocumentBuilder(); |
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InputSource inputSource= new InputSource(new StringReader(xml)); |
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Document document=dBuilder.parse(inputSource); |
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XPathFactory xPathfactory= XPathFactory.newInstance(); |
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XPath xpath = xPathfactory.newXPath(); |
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NodeList nl = (NodeList) xpath.compile("//*[local-name()='concept']/@id").evaluate(document, XPathConstants.NODESET);
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if (nl.getLength() > 0) {
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context.setOpenaireId(nl.item(0).getNodeValue()); |
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} |
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} catch (Exception e) {
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e.printStackTrace(); |
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} |
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buildContext(context); |
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return context; |
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} |
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| 229 | 249 |
static public void getRelationClaim(Claim claim, String xml) throws IOException, SAXException, ParserConfigurationException {
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| 230 | 250 |
String relationType=""; |
| 231 | 251 |
String sourceId=""; //Annotation source |
| ... | ... | |
| 598 | 618 |
r.setCollectedFrom(ClaimUtils.COLLECTED_FROM_CROSSREF); |
| 599 | 619 |
} |
| 600 | 620 |
} |
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public static void getXmlfromOrcid(Result r){
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r.setResultType(ClaimUtils.PUBLICATION); |
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public static void getXmlfromOrcid(Result result){
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result.setResultType(ClaimUtils.PUBLICATION);
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| 603 | 623 |
SearchUtils searchUtils= new SearchUtils(); |
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if(r!=null&&r.getOrcidworkid()==null){
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if(result!=null&&result.getOrcidworkid()==null){
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| 605 | 625 |
return ; |
| 606 | 626 |
} |
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System.out.println("OWI: " + r.getOrcidworkid());
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String orcid=r.getOrcidworkid().substring(0,19); |
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String orcidworkid=r.getOrcidworkid().substring(20,r.getOrcidworkid().length());
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System.out.println("OWI: " + result.getOrcidworkid());
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String orcid=result.getOrcidworkid().substring(0,19);
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String orcidworkid=result.getOrcidworkid().substring(20,result.getOrcidworkid().length());
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| 610 | 630 |
//0000-0003-5000-0001 |
| 611 | 631 |
System.out.println("orcid: "+orcid);
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| 612 | 632 |
System.out.println("OWI: "+orcidworkid);
|
| ... | ... | |
| 622 | 642 |
Document document= document=dBuilder.parse(is); |
| 623 | 643 |
XPathFactory xPathfactory= XPathFactory.newInstance(); |
| 624 | 644 |
XPath xpath = xPathfactory.newXPath(); |
| 625 |
NodeList nl ; |
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// getParent().toXML() |
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// <orcid-work put-code="19500531" visibility="public"> |
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String s = (String) xpath.compile("//orcid-work[@put-code="+orcidworkid+"]").evaluate(document, XPathConstants.STRING);
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System.out.println("Here: "+s);
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NodeList nl; |
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| 632 | 646 |
NodeList worknl = (NodeList) xpath.compile("//orcid-work[@put-code="+orcidworkid+"]").evaluate(document,XPathConstants.NODESET);
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| 633 | 647 |
if (worknl.getLength() > 0) {
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/* |
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<work-title><title>TagTick: A tool for annotation tagging over solr indexes</title></work-title> |
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<journal-title>Digital Libraries (JCDL), 2014 IEEE/ACM Joint Conference on</journal-title> |
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<work-citation><work-citation-type>bibtex</work-citation-type><citation>@inproceedings{demoTPDL2014, Author= {Artini, M. and Atzori, C. and Bardi, A. and La Bruzzo, S. and Manghi, P.}, Booktitle= {Digital Libraries (JCDL), 2014 IEEE/ACM Joint Conference on}, Date-Added= {2015-05-12 13:56:09 +0000}, Date-Modified= {2015-05-12 13:56:25 +0000}, Doi= {10.1109/JCDL.2014.6970198}, Keywords= {indexing;information filtering;query formulation;Solr indexes;TagTick;annotation tagging tools;authorized data curators;full-text index Apache Solr;functional annotation tagging environment;information space;real-time temporary bulk tagging;History;Indexes;Real-time systems;Search problems;Standards;Tagging;Vocabulary;Apache Solr;annotation tagging;full-text index;real-time update}, Month= {Sept}, Pages= {407-408}, Title= {TagTick: A tool for annotation tagging over solr indexes}, Year= {2014}, Bdsk-Url-1= {http://dx.doi.org/10.1109/JCDL.2014.6970198}}
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| 634 | 652 |
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</citation></work-citation> |
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<work-type>conference-paper</work-type><publication-date><year>2014</year></publication-date> |
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<work-external-identifiers><work-external-identifier><work-external-identifier-type>doi</work-external-identifier-type><work-external-identifier-id>10.1109/JCDL.2014.6970198</work-external-identifier-id></work-external-identifier></work-external-identifiers><work-source><uri>http://orcid.org/0000-0001-7291-3210</uri><path>0000-0001-7291-3210</path><host>orcid.org</host></work-source>*/ |
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// nl = (NodeList) xpath.compile("//title").evaluate(document, XPathConstants.NODESET);
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// if (nl.getLength() > 0) {
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// result.setTitle(nl.item(0).getNodeValue()); |
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// } |
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// nl = (NodeList) xpath.compile("//work-external-identifier").evaluate(document, XPathConstants.NODESET);
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// for (int i = 0; i < nl.getLength(); i++) {
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// nl = (NodeList) xpath.compile("//work-external-identifier").evaluate(nl.item(i), XPathConstants.NODESET);
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// result.setTitle(nl.item(0).getNodeValue()); |
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// } |
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| 635 | 669 |
nl = (NodeList) xpath.compile("//orcid-work").evaluate(document, XPathConstants.NODESET);
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| 636 | 670 |
for (int i = 0; i < nl.getLength(); i++) {
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| 637 | 671 |
if(!worknl.item(0).isEqualNode(nl.item(i))) {
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| 638 | 672 |
nl.item(i).getParentNode().removeChild(nl.item(i)); |
| 639 | 673 |
} |
| 640 | 674 |
} |
| 641 |
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| 643 | 675 |
DOMSource domSource = new DOMSource(document); |
| 644 | 676 |
StringWriter writer = new StringWriter(); |
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StreamResult result = new StreamResult(writer);
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StreamResult streamResult = new StreamResult(writer);
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| 646 | 678 |
TransformerFactory tf = TransformerFactory.newInstance(); |
| 647 | 679 |
Transformer transformer = tf.newTransformer(); |
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transformer.transform(domSource, result);
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transformer.transform(domSource, streamResult);
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| 649 | 681 |
System.out.println("XML IN String format is: \n" + writer.toString());
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r.setXml(xml); |
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r.setCollectedFrom(ClaimUtils.COLLECTED_FROM_ORCID); |
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r.setFound(true); |
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result.setXml(xml);
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result.setCollectedFrom(ClaimUtils.COLLECTED_FROM_ORCID);
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result.setFound(true);
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| 653 | 685 |
} |
| 654 | 686 |
nl = (NodeList) xpath.compile("//j.0:identifier/text()").evaluate(document, XPathConstants.NODESET);
|
| 655 | 687 |
if (nl.getLength() > 0) {
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r.setDoi(nl.item(0).getNodeValue()); |
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r.setExternal_url("http://dx.doi.org/"+r.getDoi());
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result.setDoi(nl.item(0).getNodeValue());
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result.setExternal_url("http://dx.doi.org/" + result.getDoi());
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| 658 | 690 |
} |
| 659 | 691 |
} catch (Exception e) {
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| 660 | 692 |
e.printStackTrace(); |
| ... | ... | |
| 662 | 694 |
} |
| 663 | 695 |
public static Project buildProject(String id, String claimId, boolean useAPI){
|
| 664 | 696 |
Project body=new Project(); |
| 665 |
if (id.contains("|")) {
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id = id.split("\\|")[1];
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} |
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// if (id.contains("|")) {
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// id = id.split("\\|")[1];
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// }
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| 668 | 700 |
body.setOpenaireId(id); |
| 669 | 701 |
if(useAPI){
|
| 670 | 702 |
getProjectFromAPI(body,claimId); |
Also available in: Unified diff
adding ParsingClaimUtils.getConceptFromDMF()