D-Net

Updated DOIBoost test as they are in the trunk branch

Updated classes for DOIBoost based on the trunk version

actually incrementing the counters just added

added counters for matching subject, content providers and zenodo community for each community

test for the new implementation of zenodo community value

changed to consider to mirror the change in zenodo community value: zenodo community instead of the openaire community associated to a result. The context of the zenodo community will be removed from those of the result if the zenodo community is not associated to any openaire community.

replaced CrossRef with Crossref

depending on released parent, updated dependency dnet-openaireplus-mapping-utils to most recent release

bumped version dep dnet-openaireplus-mapping-utils:6.2.25

fixed creation of the coordinates (columnFamily) driving the Put operation

less log verbosity

fixRelations must work on main entities in a single scan pass

added support for simulation mode: allows to do not change the data and keep track of summary counters

reverted version of mapping-utils dependency

bumped version of mapping-utils dependency

[maven-release-plugin] prepare for next development iteration

[maven-release-plugin] prepare release dnet-mapreduce-jobs-1.1.12-MASTER

introduced jobs to fix the relationships among deduped records. Got rid of deprecations on the HBase Put method usage

refactoring and fixed issue for empty project list

Added new check for result type checking inside list of results in country propagation

fixed issue for empty result in list of results to which propagate the country (last fix produced a bug)

changed message in context

bumped version after fixing bug for list of result(50|) empty - Propagation

fixed bug for list of result(50|) empty

Propagation general Iterator and Contants class

Iterator to handle results from mapper for project propagation

Reducers fro project propagation to File and to HBase

Iterator for managing values from mapper for result country propagation

fixed issue

using most recent release of dnet-openaireplus-mapping-utils

new Exception class for not valid list of values in reducer

modified type for type variable. From int to Type

added new variables and methods

updated implementation to use iterator

specific iterator for country propagation

Added generic Iterator over the list of information gathered from the reducer

fix error on parsing abstract

updated to consider the new class Utils and the new values in Propagation Constants classes

updated to store properties of the value

class to contain the methods common to the propagation classes among the propagation types

update of the constants for the propagation

map-reduce to implement the propagation of the association between project and result through the existence of semantic relations

map to count the number of results having a semantic relation of type isSupplementedBy that also have a relation isProducedBy with at least one project

added test to verify the parsing of EPMC record

depending on dnet-openaireplus-mapping-utils:6.2.21

avoid to import non necessary affiliations from DOIBoost

depend on mappingutils 6.2.19 for better mapping of software

[maven-release-plugin] prepare for next development iteration

[maven-release-plugin] prepare release dnet-mapreduce-jobs-1.1.10-MASTER

Testing software from biotools

fixed bug for uncompressed abstract in DOIBoostToAction

changed mapping for compressed abstract in DOIBoostToAction

less verbose logging

excluded clashing versions of jackson. We want to keep ours

using proper import for LogFactory

[maven-release-plugin] prepare for next development iteration

[maven-release-plugin] prepare release dnet-mapreduce-jobs-1.1.9-MASTER

using most recent dnet-openaireplus-mapping utils version (6.2.18)

added Mapper and Reducer class for infoSpace counts workflows

added reducer to produce counts on the infospace

added reducer to produce counts on the infospace

cannot use Guava's Splitter.splitToList, must stick to basic split method. Classpath is messed up

implemented ConfigurableExportMapper

Removed un-used import

fixed test

updated Mapper to return the whole invalid record

export invalid xml records

refactored Action

Map only job that produces [openaireId, doi] pairs of records containing invalid characters

reduced file size

added parameter to filter only organization in DOIBoostToAction

fixed problem of missing name in authors

merged beta branch to master

introduced use of BlockProcessor

[maven-release-plugin] prepare for next development iteration

[maven-release-plugin] prepare release dnet-mapreduce-jobs-1.1.8-MASTER

updated test for hbase mapping for organizations

bumped version, dnet-openaireplus-mapping-utils:6.2.15 should fix the unmapped instancetype terms

updated dnet-openaireplus-mapping-utils dependency version

fixed issue when country information is not present for datasource

change throwing of exception with counters

using updated mapping-utils module

change parameter from ImmutableBytesWritable to Text

refactoring and change of counters

using updated mapping-utils module, added unit test to check the merge procedure for context and country updates

rollback wrong commit

fixing and testing propagation implementation

reducer for country propagation that writes on hdfs

cleanup pid types in order to make them valid attributes

Need to set resourceTypeGeneral to clinicalTrial as this is where the IIS can distinguish clinical trial records from "normal dataset"

added code for propagation of countries from institutional organization

[maven-release-plugin] prepare for next development iteration

[maven-release-plugin] prepare release dnet-mapreduce-jobs-1.1.6-MASTER

updated pom, master branch

master branch for deployments @ICM

why parse strings as Floats?