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26600
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sandro.lab
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package eu.dnetlib.functionality.modular.ui.workflows.controllers;
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import java.awt.image.BufferedImage;
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import java.io.IOException;
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import java.io.OutputStream;
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import java.io.StringReader;
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import java.util.Collections;
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import java.util.Iterator;
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import javax.annotation.Resource;
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import javax.imageio.ImageIO;
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import javax.servlet.http.HttpServletResponse;
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import org.apache.commons.io.IOUtils;
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import org.apache.commons.lang.math.NumberUtils;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.dom4j.Document;
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import org.dom4j.Element;
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import org.dom4j.io.SAXReader;
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import org.joda.time.DateTime;
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import org.joda.time.format.DateTimeFormat;
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import org.joda.time.format.DateTimeFormatter;
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import org.springframework.stereotype.Controller;
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import org.springframework.web.bind.annotation.RequestMapping;
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import org.springframework.web.bind.annotation.RequestParam;
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import org.springframework.web.bind.annotation.ResponseBody;
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import com.google.common.base.Function;
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import com.google.common.collect.Iterators;
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import com.google.common.collect.Lists;
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import com.google.common.collect.Maps;
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import com.google.gson.Gson;
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import com.googlecode.sarasvati.GraphProcess;
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import com.googlecode.sarasvati.Node;
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import com.googlecode.sarasvati.NodeToken;
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import com.googlecode.sarasvati.ProcessState;
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import eu.dnetlib.common.logging.DnetLogger;
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import eu.dnetlib.common.logging.LogMessage;
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import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException;
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import eu.dnetlib.functionality.modular.ui.workflows.objects.AdvancedMetaWorkflowDescriptor;
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import eu.dnetlib.functionality.modular.ui.workflows.objects.AtomicWorkflowDescriptor;
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import eu.dnetlib.functionality.modular.ui.workflows.objects.MetaWorkflowDescriptor;
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import eu.dnetlib.functionality.modular.ui.workflows.objects.NodeInfo;
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import eu.dnetlib.functionality.modular.ui.workflows.objects.NodeTokenInfo;
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import eu.dnetlib.functionality.modular.ui.workflows.objects.ProcessListEntry;
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import eu.dnetlib.functionality.modular.ui.workflows.objects.sections.WorkflowSectionGrouper;
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import eu.dnetlib.functionality.modular.ui.workflows.sarasvati.viewer.ProcessGraphGenerator;
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import eu.dnetlib.functionality.modular.ui.workflows.util.ISLookupClient;
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import eu.dnetlib.functionality.modular.ui.workflows.util.ISRegistryClient;
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import eu.dnetlib.miscutils.datetime.DateUtils;
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import eu.dnetlib.msro.workflows.sarasvati.loader.ProfileToSarasvatiConverter;
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import eu.dnetlib.msro.workflows.sarasvati.loader.WorkflowExecutor;
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import eu.dnetlib.msro.workflows.sarasvati.registry.GraphProcessRegistry;
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26617
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michele.ar
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import eu.dnetlib.msro.workflows.util.ProcessUtils;
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26600
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sandro.lab
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import eu.dnetlib.msro.workflows.util.WorkflowsConstants;
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import eu.dnetlib.msro.workflows.util.WorkflowsConstants.WorkflowStatus;
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/**
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* Web controller for the UI
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*
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* @author Michele Artini
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*/
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@Controller
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public class WorkflowsController {
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26994
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michele.ar
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private final class JournalEntryFunction implements Function<Map<String, String>, ProcessListEntry> {
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26600
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sandro.lab
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@Override
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26994
|
michele.ar
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public ProcessListEntry apply(final Map<String, String> input) {
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String name = input.get(WorkflowsConstants.SYSTEM_WF_PROFILE_NAME);
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26600
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sandro.lab
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if (input.containsKey(WorkflowsConstants.DATAPROVIDER_NAME)) {
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26994
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michele.ar
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name += " (" + input.get(WorkflowsConstants.DATAPROVIDER_NAME) + ")";
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26600
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sandro.lab
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}
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26994
|
michele.ar
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final String procId = input.get(WorkflowsConstants.SYSTEM_WF_PROCESS_ID);
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final String wfId = input.get(WorkflowsConstants.SYSTEM_WF_PROFILE_ID);
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final String family = input.get(WorkflowsConstants.SYSTEM_WF_PROFILE_FAMILY);
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final long date = NumberUtils.toLong(input.get(LogMessage.LOG_DATE_FIELD), 0);
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final String status = Boolean.valueOf(input.get(WorkflowsConstants.SYSTEM_COMPLETED_SUCCESSFULLY)) ? "SUCCESS" : "FAILURE";
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return new ProcessListEntry(procId, wfId, name, family, status, date);
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26600
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sandro.lab
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}
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}
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@Resource
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private ISLookupClient isLookupClient;
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@Resource
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private ISRegistryClient isRegistryClient;
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@Resource
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private GraphProcessRegistry graphProcessRegistry;
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@Resource
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private ProcessGraphGenerator processGraphGenerator;
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@Resource
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private WorkflowSectionGrouper workflowSectionGrouper;
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@Resource
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private WorkflowExecutor workflowExecutor;
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@Resource
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private ProfileToSarasvatiConverter profileToSarasvatiConverter;
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@Resource(name = "msroWorkflowLogger")
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private DnetLogger dnetLogger;
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private static final Log log = LogFactory.getLog(WorkflowsController.class);
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@RequestMapping("/ui/list_metaworkflows.json")
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public @ResponseBody List<MetaWorkflowDescriptor> listMetaWorflowsForSection(@RequestParam(value = "section", required = false) final String sectionName, @RequestParam(value = "dsId", required = false) final String dsId)
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throws ISLookUpException, IOException {
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if (sectionName != null) {
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return workflowSectionGrouper.listMetaWorflowsForSection(sectionName);
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} else if (dsId != null) {
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return workflowSectionGrouper.listMetaWorflowsForDatasource(dsId);
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} else {
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return Lists.newArrayList();
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}
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}
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@RequestMapping("/ui/wf_metaworkflow.json")
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26617
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michele.ar
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public @ResponseBody AdvancedMetaWorkflowDescriptor getMetaWorkflow(@RequestParam(value = "id", required = true) final String id) throws Exception {
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final AdvancedMetaWorkflowDescriptor wf = isLookupClient.getMetaWorkflow(id);
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final String xml = isLookupClient.getSarasvatiMetaWorkflow(id);
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26600
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sandro.lab
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wf.setMapContent(processGraphGenerator.getMetaWfDescImageMap(id, xml));
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26617
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michele.ar
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return wf;
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26600
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sandro.lab
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}
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@RequestMapping("/ui/wf_atomic_workflow.json")
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26617
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michele.ar
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public @ResponseBody AtomicWorkflowDescriptor getAtomicWorkflow(@RequestParam(value = "id", required = true) final String id) throws Exception {
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final AtomicWorkflowDescriptor wf = isLookupClient.getAtomicWorkflow(id);
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final String xml = profileToSarasvatiConverter.getSarasvatiWorkflow(id).getWorkflowXml();
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26600
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sandro.lab
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wf.setMapContent(processGraphGenerator.getWfDescImageMap(id, xml));
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26617
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michele.ar
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return wf;
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26600
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sandro.lab
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}
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@RequestMapping("/ui/wf_atomic_workflow.img")
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public void showAtomicWorkflow(final HttpServletResponse response, @RequestParam(value = "id", required = true) final String id) throws Exception {
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String xml = profileToSarasvatiConverter.getSarasvatiWorkflow(id).getWorkflowXml();
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Set<String> notConfiguredNodes = isLookupClient.getNotConfiguredNodes(id);
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BufferedImage image = processGraphGenerator.getWfDescImage(id, xml, notConfiguredNodes);
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sendImage(response, image);
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}
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private void sendImage(final HttpServletResponse response, final BufferedImage image) throws IOException {
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response.setContentType("image/png");
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OutputStream out = response.getOutputStream();
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ImageIO.write(image, "png", out);
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out.flush();
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out.close();
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}
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@RequestMapping("/ui/wf.start")
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public void startWorkflow(final HttpServletResponse response, @RequestParam(value = "id", required = true) final String id) throws Exception {
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final String procId = workflowExecutor.startProcess(id);
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IOUtils.copy(new StringReader(new Gson().toJson(procId)), response.getOutputStream());
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}
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@RequestMapping("/ui/metawf.start")
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public void startMetaWorkflow(final HttpServletResponse response, @RequestParam(value = "id", required = true) final String id) throws Exception {
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workflowExecutor.startMetaWorkflow(id);
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IOUtils.copy(new StringReader(new Gson().toJson(id)), response.getOutputStream());
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}
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@RequestMapping("/ui/wf_workflow_node.json")
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public void workflowNode_info(final HttpServletResponse response,
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@RequestParam(value = "wf", required = true) final String wfId,
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@RequestParam(value = "node", required = true) final String nodeName) throws ISLookUpException, IOException {
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NodeInfo info = isLookupClient.getNodeInfo(wfId, nodeName);
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IOUtils.copy(new StringReader(new Gson().toJson(info)), response.getOutputStream());
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}
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@RequestMapping("/ui/wf_workflow_node.save")
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public void workflowNode_save(final HttpServletResponse response,
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@RequestParam(value = "wf", required = true) final String wfId,
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@RequestParam(value = "json", required = true) final String json) throws Exception {
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final Gson gson = new Gson();
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final NodeInfo info = gson.fromJson(json, NodeInfo.class);
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log.info("Updating node " + info.getName() + " of wf " + wfId);
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final String xml = isLookupClient.getProfile(wfId);
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boolean res = isRegistryClient.updateSarasvatiWorkflow(wfId, xml, info);
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for (String metaWfId : isLookupClient.listMetaWorflowsForWfId(wfId)) {
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if (isLookupClient.isExecutable(metaWfId)) {
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isRegistryClient.updateMetaWorkflowStatus(metaWfId, WorkflowStatus.EXECUTABLE);
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} else {
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isRegistryClient.updateMetaWorkflowStatus(metaWfId, WorkflowStatus.WAIT_USER_SETTINGS);
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}
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}
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IOUtils.copy(new StringReader(gson.toJson(res)), response.getOutputStream());
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}
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@RequestMapping("/ui/wf_metaworkflow.img")
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public void showMetaWorkflow(final HttpServletResponse response, @RequestParam(value = "id", required = true) final String id) throws Exception {
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String xml = isLookupClient.getSarasvatiMetaWorkflow(id);
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BufferedImage image = processGraphGenerator.getMetaWfDescImage(id, xml);
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sendImage(response, image);
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}
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@RequestMapping("/ui/wf_metaworkflow.edit")
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public void scheduleMetaWorkflow(final HttpServletResponse response, @RequestParam(value = "json", required = true) final String json) throws Exception {
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final Gson gson = new Gson();
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final AdvancedMetaWorkflowDescriptor info = gson.fromJson(json, AdvancedMetaWorkflowDescriptor.class);
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log.info("Updating workflow " + info.getName());
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final String xml = isLookupClient.getProfile(info.getWfId());
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boolean res = isRegistryClient.updateSarasvatiMetaWorkflow(info.getWfId(), xml, info);
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IOUtils.copy(new StringReader(gson.toJson(res)), response.getOutputStream());
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}
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@RequestMapping("/ui/wf_metaworkflow.clone")
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public void cloneMetaWf(final HttpServletResponse response,
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@RequestParam(value = "id", required = true) final String id,
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@RequestParam(value = "name", required = true) final String name) throws Exception {
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if (name.trim().length() > 0) {
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final Gson gson = new Gson();
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final String xml = isLookupClient.getProfile(id);
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SAXReader reader = new SAXReader();
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Document doc = reader.read(new StringReader(xml));
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doc.selectSingleNode("//METAWORKFLOW_NAME").setText(name);
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for (Object o : doc.selectNodes("//WORKFLOW")) {
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Element n = (Element) o;
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String atomWfXml = isLookupClient.getProfile(n.valueOf("@id"));
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String newAtomWfId = isRegistryClient.registerProfile(atomWfXml);
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n.addAttribute("id", newAtomWfId);
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}
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String res = isRegistryClient.registerProfile(doc.asXML());
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IOUtils.copy(new StringReader(gson.toJson(res)), response.getOutputStream());
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} else throw new IllegalArgumentException("Name is empty");
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}
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@RequestMapping("/ui/wf_proc.json")
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public void getProcessWorkflow(final HttpServletResponse response, @RequestParam(value = "id", required = true) final String id) throws Exception {
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final GraphProcess process = graphProcessRegistry.findProcess(id);
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final String mapContent = (process.getState() == ProcessState.Created) ? "" : processGraphGenerator.getProcessImageMap(id);
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String status = "";
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if (!process.isComplete()) {
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status = process.getState().toString().toUpperCase();
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} else if ("true".equals(process.getEnv().getAttribute(WorkflowsConstants.SYSTEM_COMPLETED_SUCCESSFULLY))) {
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status = "SUCCESS";
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} else {
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status = "FAILURE";
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}
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final String img = (process.getState() == ProcessState.Created) ? "../resources/img/notStarted.gif" : "wf_proc.img?id=" + id + "&t=" + DateUtils.now();
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final int priority = NumberUtils.toInt(process.getEnv().getAttribute(WorkflowsConstants.SYSTEM_WF_PRIORITY), WorkflowsConstants.DEFAULT_WF_PRIORITY);
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final String name = process.getGraph().getName();
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final AtomicWorkflowDescriptor wf = new AtomicWorkflowDescriptor(id, name, priority, status, mapContent, img, true, "auto", "RUNNING");
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IOUtils.copy(new StringReader(new Gson().toJson(wf)), response.getOutputStream());
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}
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@RequestMapping("/ui/wf_proc_node.json")
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public void getProcessWorkflowNode(final HttpServletResponse response,
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@RequestParam(value = "id", required = true) final String pid,
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@RequestParam(value = "node", required = true) final long nid) throws Exception {
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final NodeToken token = findNodeToken(pid, nid);
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final NodeTokenInfo info = (token == null) ? new NodeTokenInfo(findNodeName(pid, nid)) : new NodeTokenInfo(token);
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IOUtils.copy(new StringReader(new Gson().toJson(info)), response.getOutputStream());
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}
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private NodeToken findNodeToken(final String pid, final long nid) {
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final GraphProcess process = graphProcessRegistry.findProcess(pid);
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if (process != null) {
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for (NodeToken token : process.getNodeTokens()) {
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if (token.getNode().getId() == nid) return token;
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}
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}
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return null;
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}
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private String findNodeName(final String pid, final long nid) {
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302 |
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final GraphProcess process = graphProcessRegistry.findProcess(pid);
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if (process != null) {
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for (Node node : process.getGraph().getNodes()) {
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if (node.getId() == nid) return node.getName();
|
306 |
|
|
}
|
307 |
|
|
}
|
308 |
|
|
return "-";
|
309 |
|
|
}
|
310 |
|
|
|
311 |
|
|
@RequestMapping("/ui/wf_proc.img")
|
312 |
|
|
public void showProcessWorkflow(final HttpServletResponse response, @RequestParam(value = "id", required = true) final String id) throws Exception {
|
313 |
|
|
BufferedImage image = processGraphGenerator.getProcessImage(id);
|
314 |
|
|
sendImage(response, image);
|
315 |
|
|
}
|
316 |
|
|
|
317 |
|
|
@RequestMapping("/ui/wf_proc.kill")
|
318 |
|
|
public void killProcessWorkflow(final HttpServletResponse response, @RequestParam(value = "id", required = true) final String id) throws Exception {
|
319 |
|
|
GraphProcess proc = graphProcessRegistry.findProcess(id);
|
320 |
|
|
proc.setState(ProcessState.Canceled);
|
321 |
|
|
getProcessWorkflow(response, id);
|
322 |
|
|
}
|
323 |
|
|
|
324 |
|
|
@RequestMapping("/ui/wf_journal.range")
|
325 |
26994
|
michele.ar
|
public @ResponseBody List<ProcessListEntry> rangeWfJournal(@RequestParam(value = "start", required = true) final String start,
|
326 |
26600
|
sandro.lab
|
@RequestParam(value = "end", required = true) final String end) throws Exception {
|
327 |
|
|
DateTimeFormatter formatter = DateTimeFormat.forPattern("yyyy-MM-dd");
|
328 |
|
|
DateTime startDate = formatter.parseDateTime(start);
|
329 |
|
|
// System.out.println(startDate.toString());
|
330 |
|
|
DateTime endDate = formatter.parseDateTime(end).plusHours(23).plusMinutes(59).plusSeconds(59);
|
331 |
|
|
// System.out.println(endDate.toString());
|
332 |
|
|
final Iterator<Map<String, String>> iter = dnetLogger.range(startDate.toDate(), endDate.toDate());
|
333 |
26994
|
michele.ar
|
|
334 |
|
|
return Lists.newArrayList(Iterators.transform(iter, new JournalEntryFunction()));
|
335 |
|
|
|
336 |
26600
|
sandro.lab
|
}
|
337 |
26994
|
michele.ar
|
|
338 |
|
|
@RequestMapping("/ui/recentWfs")
|
339 |
|
|
public @ResponseBody List<ProcessListEntry> recentWfs(@RequestParam(value = "wfs", required = false) final String wfs) throws IOException {
|
340 |
|
|
final List<ProcessListEntry> res = Lists.newArrayList();
|
341 |
|
|
|
342 |
|
|
@SuppressWarnings("unchecked")
|
343 |
|
|
final Set<String> wfFilter = (wfs != null && !wfs.isEmpty()) ? (new Gson()).fromJson(wfs, Set.class) : null;
|
344 |
|
|
|
345 |
|
|
for (String pid : graphProcessRegistry.listIdentifiers()) {
|
346 |
|
|
final GraphProcess proc = graphProcessRegistry.findProcess(pid);
|
347 |
|
|
if (wfFilter == null || wfFilter.contains(ProcessUtils.calculateWfId(proc))) {
|
348 |
|
|
res.add(new ProcessListEntry(pid, proc));
|
349 |
|
|
}
|
350 |
|
|
}
|
351 |
|
|
return res;
|
352 |
|
|
}
|
353 |
26600
|
sandro.lab
|
|
354 |
|
|
@RequestMapping("/ui/wf_journal.find")
|
355 |
26994
|
michele.ar
|
public @ResponseBody List<ProcessListEntry> findWfJournalLogs(@RequestParam(value = "id", required = true) final String wfId) throws Exception {
|
356 |
26600
|
sandro.lab
|
final Iterator<Map<String, String>> iter = dnetLogger.find("system:profileId", wfId);
|
357 |
26994
|
michele.ar
|
return Lists.newArrayList(Iterators.transform(iter, new JournalEntryFunction()));
|
358 |
26600
|
sandro.lab
|
}
|
359 |
|
|
|
360 |
|
|
@RequestMapping("/ui/wf_journal.get")
|
361 |
|
|
public void getWfJournalLog(final HttpServletResponse response, @RequestParam(value = "id", required = true) final String id) throws Exception {
|
362 |
|
|
final Map<String, String> map = dnetLogger.findOne("system:processId", id);
|
363 |
|
|
|
364 |
|
|
final List<String> keys = Lists.newArrayList(map.keySet());
|
365 |
|
|
Collections.sort(keys);
|
366 |
|
|
|
367 |
|
|
final List<Map<String, String>> list = Lists.transform(keys, new Function<String, Map<String, String>>() {
|
368 |
|
|
|
369 |
|
|
@Override
|
370 |
|
|
public Map<String, String> apply(final String k) {
|
371 |
|
|
final Map<String, String> res = Maps.newHashMap();
|
372 |
|
|
res.put("k", k);
|
373 |
|
|
res.put("v", map.get(k));
|
374 |
|
|
return res;
|
375 |
|
|
}
|
376 |
|
|
});
|
377 |
|
|
|
378 |
|
|
IOUtils.copy(new StringReader(new Gson().toJson(list)), response.getOutputStream());
|
379 |
|
|
}
|
380 |
|
|
|
381 |
|
|
@RequestMapping("/ui/wf_atomic_workflow.enable")
|
382 |
|
|
public void enableAtomicWf(final HttpServletResponse response,
|
383 |
|
|
@RequestParam(value = "id", required = true) final String id,
|
384 |
|
|
@RequestParam(value = "start", required = true) final String value) throws Exception {
|
385 |
|
|
|
386 |
|
|
isRegistryClient.configureWorkflowStart(id, value);
|
387 |
|
|
|
388 |
|
|
IOUtils.copy(new StringReader(new Gson().toJson(value)), response.getOutputStream());
|
389 |
|
|
}
|
390 |
|
|
|
391 |
|
|
@RequestMapping("/ui/wf_atomic_workflow.priority")
|
392 |
|
|
public void changeAtomicWfPriority(final HttpServletResponse response,
|
393 |
|
|
@RequestParam(value = "id", required = true) final String id,
|
394 |
|
|
@RequestParam(value = "value", required = true) final int value) throws Exception {
|
395 |
|
|
isRegistryClient.changeAtomicWfPriority(id, value);
|
396 |
|
|
|
397 |
|
|
IOUtils.copy(new StringReader(new Gson().toJson(value)), response.getOutputStream());
|
398 |
|
|
}
|
399 |
|
|
|
400 |
|
|
}
|