1
|
package eu.dnetlib.iis.core.java.jsonworkflownodes;
|
2
|
|
3
|
import java.io.IOException;
|
4
|
import java.util.HashMap;
|
5
|
import java.util.List;
|
6
|
import java.util.Map;
|
7
|
|
8
|
import org.apache.avro.specific.SpecificRecord;
|
9
|
import org.apache.hadoop.conf.Configuration;
|
10
|
import org.apache.hadoop.fs.FileSystem;
|
11
|
import org.apache.hadoop.fs.Path;
|
12
|
|
13
|
import eu.dnetlib.iis.core.TestsIOUtils;
|
14
|
import eu.dnetlib.iis.core.java.PortBindings;
|
15
|
import eu.dnetlib.iis.core.java.Process;
|
16
|
import eu.dnetlib.iis.core.java.io.DataStore;
|
17
|
import eu.dnetlib.iis.core.java.io.FileSystemPath;
|
18
|
import eu.dnetlib.iis.core.java.io.JsonUtils;
|
19
|
import eu.dnetlib.iis.core.java.jsonworkflownodes.PortSpecifications.SpecificationValues;
|
20
|
import eu.dnetlib.iis.core.java.porttype.PortType;
|
21
|
|
22
|
/**
|
23
|
* Reads the data stores from specified input ports and compares them with
|
24
|
* expected JSON-encoded data stores. If There is a mismatch,
|
25
|
* an exception is thrown.
|
26
|
*
|
27
|
* @author Mateusz Kobos
|
28
|
*/
|
29
|
public class TestingConsumer implements Process {
|
30
|
private final PortSpecifications inputSpecs;
|
31
|
|
32
|
/**
|
33
|
* @param inputSpecifications specifications of input. Each element of
|
34
|
* the array corresponds to a single specification. Single specification
|
35
|
* conforms to the following template:
|
36
|
* "{input port name, schema reference, path to JSON file in resources
|
37
|
* corresponding to the expected input data store}",
|
38
|
* e.g. "{person, eu.dnetlib.iis.core.examples.schemas.documentandauthor.Person,
|
39
|
* eu/dnetlib/iis/core/examples/person.json}"
|
40
|
*/
|
41
|
public TestingConsumer(String[] inputSpecifications){
|
42
|
inputSpecs = new PortSpecifications(inputSpecifications);
|
43
|
}
|
44
|
|
45
|
@Override
|
46
|
public Map<String, PortType> getInputPorts() {
|
47
|
return inputSpecs.getPortTypes();
|
48
|
}
|
49
|
|
50
|
@Override
|
51
|
public Map<String, PortType> getOutputPorts() {
|
52
|
return new HashMap<String, PortType>();
|
53
|
}
|
54
|
|
55
|
@Override
|
56
|
public void run(PortBindings portBindings, Configuration configuration,
|
57
|
Map<String, String> parameters) throws Exception {
|
58
|
Map<String, Path> input = portBindings.getInput();
|
59
|
FileSystem fs = FileSystem.get(configuration);
|
60
|
for(Map.Entry<String, Path> e: input.entrySet()){
|
61
|
SpecificationValues specs = inputSpecs.get(e.getKey());
|
62
|
check(new FileSystemPath(fs, e.getValue()), specs);
|
63
|
}
|
64
|
}
|
65
|
|
66
|
private static void check(FileSystemPath actualPath, SpecificationValues specs) throws IOException{
|
67
|
List<SpecificRecord> expected = JsonUtils.convertToList(
|
68
|
specs.jsonFilePath, specs.schema, SpecificRecord.class);
|
69
|
List<SpecificRecord> actual = DataStore.read(actualPath, specs.schema);
|
70
|
TestsIOUtils.assertEqualSets(expected, actual, true);
|
71
|
}
|
72
|
}
|