D-Net

#1315 introducing document to protein databank reference extraction outcome exporter module

#1315 propagating confidenceLevel to DocumentToConceptIds. Updating PIG transformer script by introducing concept identifiers deduplication UDF function picking record with the highest confidence level, introducing unit and integration tests. Propagating changes in document to concepts exporter module.

Removing usage of working_dir from Java workflow node.

imports cleanup

#118 fixing web usage similarity exporter module

#118 updating similarities exporter module: assuming relations provided as input are bidirectional so we do not create backward relations

#919 renaming DocumentToResearchInitiative to DocumentToConceptId and DocumentToResearchInitiatives to DocumentToConceptIds

#919 introducing support for exporting document project concepts, minor research-initatives exporter refactoring

• writing skipped document identifiers to DocumentId datastore
• filtering out relations by skipped identifiers from DocumentId datasetore

#963 propagating dataset -> mdstore from import to exporting phase: importer produces DocumentToMDStore datasetore utilized by exporter module. Updating transformer definition to handle DocumentToMDStore instead of Identifier schema