Revision 42530
Added by Andrea Mannocci over 8 years ago
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/pom.xml | ||
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<?xml version="1.0" encoding="UTF-8"?> |
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd"> |
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<parent> |
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<groupId>eu.dnetlib</groupId> |
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<artifactId>dnet-parent</artifactId> |
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<version>1.0.0</version> |
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</parent> |
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<modelVersion>4.0.0</modelVersion> |
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<groupId>eu.dnetlib</groupId> |
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<artifactId>dnet-datasource-manager-service</artifactId> |
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<packaging>jar</packaging> |
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<version>1.0.4</version> |
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<scm> |
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<developerConnection>scm:svn:https://svn.driver.research-infrastructures.eu/driver/dnet40/modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4</developerConnection> |
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</scm> |
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<dependencies> |
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<dependency> |
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<groupId>eu.dnetlib</groupId> |
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<artifactId>dnet-datasource-manager-rmi</artifactId> |
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<version>[4.0.0, 5.0.0)</version> |
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</dependency> |
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<dependency> |
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<groupId>eu.dnetlib</groupId> |
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<artifactId>cnr-service-common</artifactId> |
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<version>[2.1.0,3.0.0)</version> |
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</dependency> |
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<dependency> |
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<groupId>junit</groupId> |
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<artifactId>junit</artifactId> |
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<version>${junit.version}</version>
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<scope>test</scope> |
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</dependency> |
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</dependencies> |
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</project> |
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| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/java/eu/dnetlib/enabling/datasources/DatasourceManagerServiceImpl.java | ||
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package eu.dnetlib.enabling.datasources; |
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import java.io.StringReader; |
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import java.text.ParseException; |
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import java.util.Collections; |
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import java.util.Date; |
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import java.util.List; |
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import java.util.Map; |
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import javax.annotation.Resource; |
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import org.antlr.stringtemplate.StringTemplate; |
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import org.apache.commons.io.IOUtils; |
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import org.apache.commons.lang.StringEscapeUtils; |
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import org.apache.commons.lang.StringUtils; |
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import org.apache.commons.lang.math.NumberUtils; |
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import org.apache.commons.logging.Log; |
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import org.apache.commons.logging.LogFactory; |
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import org.dom4j.Document; |
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import org.dom4j.Element; |
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import org.dom4j.Node; |
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import org.dom4j.io.SAXReader; |
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import org.quartz.CronExpression; |
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import org.springframework.beans.factory.annotation.Required; |
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import org.springframework.core.io.ClassPathResource; |
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import com.google.common.base.Function; |
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import com.google.common.collect.Lists; |
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import com.google.common.collect.Maps; |
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import com.google.common.collect.Sets; |
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import eu.dnetlib.enabling.datasources.rmi.BrowsableField; |
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import eu.dnetlib.enabling.datasources.rmi.BrowseTerm; |
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import eu.dnetlib.enabling.datasources.rmi.DatasourceConstants; |
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import eu.dnetlib.enabling.datasources.rmi.DatasourceDesc; |
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import eu.dnetlib.enabling.datasources.rmi.DatasourceManagerService; |
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import eu.dnetlib.enabling.datasources.rmi.DatasourceManagerServiceException; |
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import eu.dnetlib.enabling.datasources.rmi.IfaceDesc; |
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import eu.dnetlib.enabling.datasources.rmi.RepositoryMapEntry; |
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import eu.dnetlib.enabling.datasources.rmi.SearchInterfacesEntry; |
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import eu.dnetlib.enabling.datasources.rmi.SimpleDatasourceDesc; |
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import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpDocumentNotFoundException; |
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import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException; |
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import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService; |
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import eu.dnetlib.enabling.is.registry.rmi.ISRegistryException; |
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import eu.dnetlib.enabling.is.registry.rmi.ISRegistryService; |
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import eu.dnetlib.enabling.locators.UniqueServiceLocator; |
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import eu.dnetlib.enabling.tools.AbstractBaseService; |
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public class DatasourceManagerServiceImpl extends AbstractBaseService implements DatasourceManagerService {
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private static final Log log = LogFactory.getLog(DatasourceManagerServiceImpl.class); |
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private static final String REPOSITORY_RESOURCE_TYPE = "RepositoryServiceResourceType"; |
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private List<XmlBrowsableField> browsableFields; |
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private ClassPathResource findReposQueryTmpl = new ClassPathResource("/eu/dnetlib/enabling/datasources/templates/findRepos.xquery.st");
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private ClassPathResource browseRepoApisQueryTmpl = new ClassPathResource("/eu/dnetlib/enabling/datasources/templates/browseRepoApis.xquery.st");
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private ClassPathResource findRepoApisQueryTmpl = new ClassPathResource("/eu/dnetlib/enabling/datasources/templates/findRepoApis.xquery.st");
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private ClassPathResource findReposMapQuery = new ClassPathResource("/eu/dnetlib/enabling/datasources/templates/findReposMap.xquery");
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private ClassPathResource simpleFindReposQueryTmpl = new ClassPathResource("/eu/dnetlib/enabling/datasources/templates/simpleFindRepos.xquery.st");
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@Resource |
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private UniqueServiceLocator serviceLocator; |
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private String environment; |
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private String fixDsId(final String dsId) throws DatasourceManagerServiceException {
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if (dsId.endsWith("_UGVuZGluZ1JlcG9zaXRvcnlSZXNvdXJjZXMvUmVwb3NpdG9yeVNlcnZpY2VSZXNvdXJjZVR5cGU=")
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|| dsId.endsWith("_UmVwb3NpdG9yeVNlcnZpY2VSZXNvdXJjZXMvUmVwb3NpdG9yeVNlcnZpY2VSZXNvdXJjZVR5cGU=")) {
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return dsId; |
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} else {
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try {
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return serviceLocator |
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.getService(ISLookUpService.class) |
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.getResourceProfileByQuery( |
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"for $x in collection("
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+ "'/db/DRIVER/RepositoryServiceResources/RepositoryServiceResourceType'," |
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+ "'/db/DRIVER/PendingRepositoryResources/RepositoryServiceResourceType') " |
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+ "where $x//DATASOURCE_ORIGINAL_ID = '" + dsId + "' " |
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+ "return $x//RESOURCE_IDENTIFIER/@value/string()"); |
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} catch (Exception e) {
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throw new DatasourceManagerServiceException("Invalid id: " + dsId, e);
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} |
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} |
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} |
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@Override |
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public boolean addDatasource(final DatasourceDesc ds) throws DatasourceManagerServiceException {
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try {
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final String profile = DatasourceDescToProfile.convert(ds, environment); |
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serviceLocator.getService(ISRegistryService.class).registerProfile(profile); |
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return true; |
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} catch (Exception e) {
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log.error("Error registering profile", e);
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throw new DatasourceManagerServiceException("Error registering profile", e);
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} |
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} |
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@Override |
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public boolean deleteDatasource(final String dsId) throws DatasourceManagerServiceException {
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return _deleteDatasource(fixDsId(dsId)); |
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} |
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private boolean _deleteDatasource(final String dsId) throws DatasourceManagerServiceException {
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try {
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return serviceLocator.getService(ISRegistryService.class).deleteProfile(dsId); |
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} catch (ISRegistryException e) {
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log.error("Error deleting profile " + dsId, e);
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throw new DatasourceManagerServiceException("Error deleting profile " + dsId, e);
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} |
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} |
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@Override |
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public DatasourceDesc getDatasource(final String dsId) throws DatasourceManagerServiceException {
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return _getDatasource(fixDsId(dsId)); |
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} |
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private DatasourceDesc _getDatasource(final String dsId) throws DatasourceManagerServiceException {
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try {
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final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(dsId); |
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return ProfileToDatasourceDesc.convert(profile); |
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} catch (Exception e) {
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log.error("Error accessing profile " + dsId, e);
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throw new DatasourceManagerServiceException("Error accessing profile " + dsId, e);
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} |
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} |
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@Override |
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public List<DatasourceDesc> listAllDatasources() throws DatasourceManagerServiceException {
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return listDatasourcesUsingFilter(null, null, null, null); |
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} |
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@Override |
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public List<DatasourceDesc> listDatasourcesUsingFilter(final String compliance, |
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final String contentDescription, |
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final String iisProcessingWorkflow, |
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final String collectedFrom) |
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throws DatasourceManagerServiceException {
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try {
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final StringTemplate st = new StringTemplate(); |
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st.setTemplate(IOUtils.toString(findReposQueryTmpl.getInputStream())); |
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final Map<String, String> conds = Maps.newHashMap(); |
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if (StringUtils.isNotBlank(compliance)) {
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conds.put("//INTERFACE/@compliance", compliance);
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} |
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if (StringUtils.isNotBlank(contentDescription)) {
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conds.put("//INTERFACE/@contentDescription", contentDescription);
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} |
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if (StringUtils.isNotBlank(iisProcessingWorkflow)) {
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// NOT USED |
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} |
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if (StringUtils.isNotBlank(collectedFrom)) {
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// NOT USED |
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} |
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if (!conds.isEmpty()) {
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st.setAttribute("conds", conds);
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} |
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final List<String> list = serviceLocator.getService(ISLookUpService.class).quickSearchProfile(st.toString()); |
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return Lists.transform(list, new ProfileToDatasourceDesc()); |
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} catch (Exception e) {
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log.error("Error listing datasources", e);
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throw new DatasourceManagerServiceException("Error listing datasources", e);
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} |
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} |
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@Override |
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public boolean updateLevelOfCompliance(final String dsId, final String ifaceId, final String level) throws DatasourceManagerServiceException {
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return _updateLevelOfCompliance(fixDsId(dsId), ifaceId, level); |
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} |
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private boolean _updateLevelOfCompliance(final String dsId, final String ifaceId, final String level) throws DatasourceManagerServiceException {
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try {
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return serviceLocator.getService(ISRegistryService.class) |
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.updateProfileNode(dsId, "//INTERFACE[@id = '" + ifaceId + "']/@compliance", "'" + level + "'"); |
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} catch (Exception e) {
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log.error("Error updating profile: " + dsId, e);
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throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
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} |
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} |
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@Override |
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public boolean updateBaseUrl(final String dsId, final String ifaceId, final String baseUrl) throws DatasourceManagerServiceException {
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return _updateBaseUrl(fixDsId(dsId), ifaceId, baseUrl); |
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} |
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private boolean _updateBaseUrl(final String dsId, final String ifaceId, final String baseUrl) throws DatasourceManagerServiceException {
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try {
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return serviceLocator.getService(ISRegistryService.class) |
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.updateProfileNode(dsId, "//INTERFACE[@id = '" + ifaceId + "']/BASE_URL", "<BASE_URL>" + baseUrl + "</BASE_URL>"); |
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} catch (Exception e) {
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log.error("Error updating profile: " + dsId, e);
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throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
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} |
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} |
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@Override |
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public boolean updateActivationStatus(final String dsId, final String ifaceId, final boolean active) throws DatasourceManagerServiceException {
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return _updateActivationStatus(fixDsId(dsId), ifaceId, active); |
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} |
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private boolean _updateActivationStatus(final String dsId, final String ifaceId, final boolean active) throws DatasourceManagerServiceException {
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try {
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return serviceLocator.getService(ISRegistryService.class) |
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.updateProfileNode(dsId, "//INTERFACE[@id = '" + ifaceId + "']/@active", "'" + active + "'"); |
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} catch (Exception e) {
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log.error("Error updating profile: " + dsId, e);
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throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
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} |
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} |
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@Override |
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public boolean updateContentDescription(final String dsId, final String ifaceId, final String desc) throws DatasourceManagerServiceException {
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return _updateContentDescription(fixDsId(dsId), ifaceId, desc); |
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} |
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private boolean _updateContentDescription(final String dsId, final String ifaceId, final String desc) throws DatasourceManagerServiceException {
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try {
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return serviceLocator.getService(ISRegistryService.class) |
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.updateProfileNode(dsId, "//INTERFACE[@id = '" + ifaceId + "']/@contentDescription", "'" + desc + "'"); |
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} catch (Exception e) {
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log.error("Error updating profile: " + dsId, e);
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throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
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} |
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} |
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@Override |
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public boolean setIisProcessingWorkflow(final String dsId, final String ifaceId, final String wf) throws DatasourceManagerServiceException {
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throw new DatasourceManagerServiceException("NOT IMPLEMENTED");
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} |
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@Override |
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public boolean updateExtraField(final String dsId, final String ifaceId, final String field, final String value, final boolean preserveOriginal) |
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throws DatasourceManagerServiceException {
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return _updateExtraField(fixDsId(dsId), ifaceId, field, value, preserveOriginal); |
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} |
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private boolean _updateExtraField(final String dsId, final String ifaceId, final String field, final String value, final boolean preserveOriginal) |
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throws DatasourceManagerServiceException {
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try {
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final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(dsId); |
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final Document doc = new SAXReader().read(new StringReader(profile)); |
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final Node ifcNode = doc.selectSingleNode("//INTERFACE[@id = '" + ifaceId + "']");
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final Node node = ifcNode.selectSingleNode("./INTERFACE_EXTRA_FIELD[@name = '" + field + "']");
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if (node != null) {
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node.setText(value); |
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} else {
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final Element e = ((Element) ifcNode).addElement("INTERFACE_EXTRA_FIELD");
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e.addAttribute("name", field);
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e.setText(value); |
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} |
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return serviceLocator.getService(ISRegistryService.class).updateProfile(dsId, doc.asXML(), REPOSITORY_RESOURCE_TYPE); |
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} catch (Exception e) {
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log.error("Error updating profile: " + dsId, e);
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throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
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} |
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} |
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@Override |
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public boolean updateAccessParam(final String dsId, final String ifaceId, final String field, final String value, final boolean preserveOriginal) |
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throws DatasourceManagerServiceException {
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return _updateAccessParam(fixDsId(dsId), ifaceId, field, value, preserveOriginal); |
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} |
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private boolean _updateAccessParam(final String dsId, final String ifaceId, final String field, final String value, final boolean preserveOriginal) |
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throws DatasourceManagerServiceException {
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| 275 |
try {
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final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(dsId); |
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final Document doc = new SAXReader().read(new StringReader(profile)); |
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final Node node = doc.selectSingleNode("//INTERFACE[@id = '" + ifaceId + "']/ACCESS_PROTOCOL");
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((Element) node).addAttribute(field, value); |
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return serviceLocator.getService(ISRegistryService.class).updateProfile(dsId, doc.asXML(), REPOSITORY_RESOURCE_TYPE); |
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} catch (Exception e) {
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log.error("Error updating profile: " + dsId, e);
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throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
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} |
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} |
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@Override |
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public boolean deleteAccessParamOrExtraField(final String dsId, final String ifaceId, final String field) throws DatasourceManagerServiceException {
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return _deleteAccessParamOrExtraField(fixDsId(dsId), ifaceId, field); |
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} |
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|
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private boolean _deleteAccessParamOrExtraField(final String dsId, final String ifaceId, final String field) throws DatasourceManagerServiceException {
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try {
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| 296 |
final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(dsId); |
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final Document doc = new SAXReader().read(new StringReader(profile)); |
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|
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final Node ef = doc.selectSingleNode("//INTERFACE[@id = '" + ifaceId + "']/INTERFACE_EXTRA_FIELD[@name = '" + field + "']");
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| 300 |
if (ef != null) {
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ef.detach(); |
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} |
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final Node ap = doc.selectSingleNode("//INTERFACE[@id = '" + ifaceId + "']/ACCESS_PROTOCOL/@" + field);
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| 304 |
if (ap != null) {
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ap.detach(); |
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|
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} |
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return serviceLocator.getService(ISRegistryService.class).updateProfile(dsId, doc.asXML(), REPOSITORY_RESOURCE_TYPE); |
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} catch (Exception e) {
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| 310 |
log.error("Error updating profile: " + dsId, e);
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| 311 |
throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
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| 312 |
} |
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} |
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|
|
| 315 |
@Override |
|
| 316 |
public boolean addInterface(final String dsId, final IfaceDesc iface) throws DatasourceManagerServiceException {
|
|
| 317 |
return _addInterface(fixDsId(dsId), iface); |
|
| 318 |
} |
|
| 319 |
|
|
| 320 |
private boolean _addInterface(final String dsId, final IfaceDesc iface) throws DatasourceManagerServiceException {
|
|
| 321 |
try {
|
|
| 322 |
final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(dsId); |
|
| 323 |
final Document doc = new SAXReader().read(new StringReader(profile)); |
|
| 324 |
|
|
| 325 |
final Node node = doc.selectSingleNode("//INTERFACE[@id = '" + iface.getId() + "']");
|
|
| 326 |
if (node != null) {
|
|
| 327 |
node.detach(); |
|
| 328 |
} |
|
| 329 |
|
|
| 330 |
((Element) doc.selectSingleNode("//INTERFACES")).add(IfaceDescToNode.convert(iface));
|
|
| 331 |
|
|
| 332 |
return serviceLocator.getService(ISRegistryService.class).updateProfile(dsId, doc.asXML(), REPOSITORY_RESOURCE_TYPE); |
|
| 333 |
} catch (Exception e) {
|
|
| 334 |
log.error("Error updating profile: " + dsId, e);
|
|
| 335 |
throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
|
|
| 336 |
} |
|
| 337 |
} |
|
| 338 |
|
|
| 339 |
@Override |
|
| 340 |
public boolean deleteInterface(final String dsId, final String ifaceId) throws DatasourceManagerServiceException {
|
|
| 341 |
return _deleteInterface(fixDsId(dsId), ifaceId); |
|
| 342 |
} |
|
| 343 |
|
|
| 344 |
private boolean _deleteInterface(final String dsId, final String ifaceId) throws DatasourceManagerServiceException {
|
|
| 345 |
try {
|
|
| 346 |
final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(dsId); |
|
| 347 |
final Document doc = new SAXReader().read(new StringReader(profile)); |
|
| 348 |
|
|
| 349 |
final Node node = doc.selectSingleNode("//INTERFACE[@id = '" + ifaceId + "']");
|
|
| 350 |
if (node != null) {
|
|
| 351 |
node.detach(); |
|
| 352 |
} |
|
| 353 |
|
|
| 354 |
return serviceLocator.getService(ISRegistryService.class).updateProfile(dsId, doc.asXML(), REPOSITORY_RESOURCE_TYPE); |
|
| 355 |
} catch (Exception e) {
|
|
| 356 |
log.error("Error updating profile: " + dsId, e);
|
|
| 357 |
throw new DatasourceManagerServiceException("Error updating profile: " + dsId, e);
|
|
| 358 |
} |
|
| 359 |
} |
|
| 360 |
|
|
| 361 |
@Override |
|
| 362 |
public boolean updateSQL(final String dsId, final String sql, final boolean delete) throws DatasourceManagerServiceException {
|
|
| 363 |
throw new DatasourceManagerServiceException("NOT IMPLEMENTED");
|
|
| 364 |
} |
|
| 365 |
|
|
| 366 |
@Override |
|
| 367 |
public Date findNextScheduledExecution(final String dsId, final String ifaceId) throws DatasourceManagerServiceException {
|
|
| 368 |
return _findNextScheduledExecution(fixDsId(dsId), ifaceId); |
|
| 369 |
} |
|
| 370 |
|
|
| 371 |
private Date _findNextScheduledExecution(final String dsId, final String ifaceId) throws DatasourceManagerServiceException {
|
|
| 372 |
final String xquery = "/*[.//DATAPROVIDER/@interface='" + ifaceId + "' and .//SCHEDULING/@enabled='true']//CRON/text()"; |
|
| 373 |
try {
|
|
| 374 |
final String cronExpression = serviceLocator.getService(ISLookUpService.class).getResourceProfileByQuery(xquery); |
|
| 375 |
final CronExpression cron = new CronExpression(cronExpression); |
|
| 376 |
return cron.getNextValidTimeAfter(new Date()); |
|
| 377 |
} catch (ISLookUpDocumentNotFoundException e) {
|
|
| 378 |
// When the value is not found a null value must be returned |
|
| 379 |
return null; |
|
| 380 |
} catch (ISLookUpException e) {
|
|
| 381 |
log.error("Error in xquery: " + xquery, e);
|
|
| 382 |
throw new DatasourceManagerServiceException("Error in xquery: " + xquery, e);
|
|
| 383 |
} catch (ParseException e) {
|
|
| 384 |
log.error("Error parsing cron expression", e);
|
|
| 385 |
throw new DatasourceManagerServiceException("Error parsing cron expression", e);
|
|
| 386 |
} |
|
| 387 |
} |
|
| 388 |
|
|
| 389 |
@Override |
|
| 390 |
public boolean bulkUpdateApiExtraFields(final String repoId, final String ifaceId, final Map<String, String> fields) |
|
| 391 |
throws DatasourceManagerServiceException {
|
|
| 392 |
try {
|
|
| 393 |
final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(repoId); |
|
| 394 |
|
|
| 395 |
final SAXReader reader = new SAXReader(); |
|
| 396 |
final Document doc = reader.read(new StringReader(profile)); |
|
| 397 |
|
|
| 398 |
final Element iface = (Element) doc.selectSingleNode("//INTERFACE[@id='" + ifaceId + "']");
|
|
| 399 |
if (iface != null) {
|
|
| 400 |
|
|
| 401 |
while (iface.selectNodes("./INTERFACE_EXTRA_FIELD").size() > 0) {
|
|
| 402 |
iface.selectSingleNode("./INTERFACE_EXTRA_FIELD").detach();
|
|
| 403 |
} |
|
| 404 |
for (Map.Entry<String, String> e : fields.entrySet()) {
|
|
| 405 |
if (e.getValue() != null && !e.getValue().isEmpty()) {
|
|
| 406 |
final Element field = iface.addElement("INTERFACE_EXTRA_FIELD");
|
|
| 407 |
field.addAttribute("name", e.getKey());
|
|
| 408 |
field.addText(e.getValue()); |
|
| 409 |
} |
|
| 410 |
} |
|
| 411 |
serviceLocator.getService(ISRegistryService.class).updateProfile(repoId, doc.asXML(), REPOSITORY_RESOURCE_TYPE); |
|
| 412 |
} else {
|
|
| 413 |
log.error("Invalid interface: " + ifaceId);
|
|
| 414 |
throw new DatasourceManagerServiceException("Missing interface: " + ifaceId);
|
|
| 415 |
} |
|
| 416 |
} catch (Exception e) {
|
|
| 417 |
log.error("Error updating API of profile: " + repoId);
|
|
| 418 |
throw new DatasourceManagerServiceException("Error updating API of profile: " + repoId, e);
|
|
| 419 |
} |
|
| 420 |
return true; |
|
| 421 |
|
|
| 422 |
} |
|
| 423 |
|
|
| 424 |
@Override |
|
| 425 |
public boolean bulkUpdateApiAccessParams(final String dsId, final String ifaceId, final Map<String, String> params) |
|
| 426 |
throws DatasourceManagerServiceException {
|
|
| 427 |
return _bulkUpdateApiAccessParams(fixDsId(dsId), ifaceId, params); |
|
| 428 |
} |
|
| 429 |
|
|
| 430 |
private boolean _bulkUpdateApiAccessParams(final String repoId, final String ifaceId, final Map<String, String> params) |
|
| 431 |
throws DatasourceManagerServiceException {
|
|
| 432 |
try {
|
|
| 433 |
final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(repoId); |
|
| 434 |
|
|
| 435 |
final SAXReader reader = new SAXReader(); |
|
| 436 |
final Document doc = reader.read(new StringReader(profile)); |
|
| 437 |
|
|
| 438 |
final Element accessNode = (Element) doc.selectSingleNode("//INTERFACE[@id='" + ifaceId + "']/ACCESS_PROTOCOL");
|
|
| 439 |
if (accessNode != null) {
|
|
| 440 |
while (accessNode.attributes().size() > 0) {
|
|
| 441 |
accessNode.selectSingleNode("@*").detach();
|
|
| 442 |
} |
|
| 443 |
for (Map.Entry<String, String> e : params.entrySet()) {
|
|
| 444 |
if (e.getValue() != null && !e.getValue().isEmpty()) {
|
|
| 445 |
if (e.getKey().equalsIgnoreCase("baseUrl")) {
|
|
| 446 |
doc.selectSingleNode("//INTERFACE[@id='" + ifaceId + "']/BASE_URL").setText(e.getValue());
|
|
| 447 |
} else {
|
|
| 448 |
accessNode.addAttribute(e.getKey(), e.getValue()); |
|
| 449 |
} |
|
| 450 |
} |
|
| 451 |
} |
|
| 452 |
serviceLocator.getService(ISRegistryService.class).updateProfile(repoId, doc.asXML(), REPOSITORY_RESOURCE_TYPE); |
|
| 453 |
} else {
|
|
| 454 |
log.error("Invalid interface: " + ifaceId);
|
|
| 455 |
throw new DatasourceManagerServiceException("Missing interface: " + ifaceId);
|
|
| 456 |
} |
|
| 457 |
} catch (Exception e) {
|
|
| 458 |
log.error("Error updating API of profile: " + repoId);
|
|
| 459 |
throw new DatasourceManagerServiceException("Error updating API of profile: " + repoId, e);
|
|
| 460 |
} |
|
| 461 |
return true; |
|
| 462 |
} |
|
| 463 |
|
|
| 464 |
@Override |
|
| 465 |
public boolean overrideCompliance(final String dsId, final String ifaceId, final String level) throws DatasourceManagerServiceException {
|
|
| 466 |
return _overrideCompliance(fixDsId(dsId), ifaceId, level); |
|
| 467 |
} |
|
| 468 |
|
|
| 469 |
private boolean _overrideCompliance(final String repoId, final String ifaceId, final String compliance) throws DatasourceManagerServiceException {
|
|
| 470 |
try {
|
|
| 471 |
final String profile = serviceLocator.getService(ISLookUpService.class).getResourceProfile(repoId); |
|
| 472 |
|
|
| 473 |
final SAXReader reader = new SAXReader(); |
|
| 474 |
final Document doc = reader.read(new StringReader(profile)); |
|
| 475 |
|
|
| 476 |
final Element iface = (Element) doc.selectSingleNode("//INTERFACE[@id='" + ifaceId + "']");
|
|
| 477 |
if (iface != null) {
|
|
| 478 |
final Map<String, String> fields = Maps.newHashMap(); |
|
| 479 |
|
|
| 480 |
if (!StringUtils.isEmpty(compliance)) {
|
|
| 481 |
fields.put(DatasourceConstants.OVERRIDING_COMPLIANCE_FIELD, compliance); |
|
| 482 |
} |
|
| 483 |
|
|
| 484 |
while (iface.selectNodes("./INTERFACE_EXTRA_FIELD").size() > 0) {
|
|
| 485 |
final Node node = iface.selectSingleNode("./INTERFACE_EXTRA_FIELD");
|
|
| 486 |
final String name = node.valueOf("@name");
|
|
| 487 |
|
|
| 488 |
if (!name.equals(DatasourceConstants.OVERRIDING_COMPLIANCE_FIELD)) {
|
|
| 489 |
fields.put(node.valueOf("@name"), node.getText());
|
|
| 490 |
} |
|
| 491 |
node.detach(); |
|
| 492 |
} |
|
| 493 |
|
|
| 494 |
for (Map.Entry<String, String> e : fields.entrySet()) {
|
|
| 495 |
if (e.getValue() != null && !e.getValue().isEmpty()) {
|
|
| 496 |
final Element field = iface.addElement("INTERFACE_EXTRA_FIELD");
|
|
| 497 |
field.addAttribute("name", e.getKey());
|
|
| 498 |
field.addText(e.getValue()); |
|
| 499 |
} |
|
| 500 |
} |
|
| 501 |
serviceLocator.getService(ISRegistryService.class).updateProfile(repoId, doc.asXML(), REPOSITORY_RESOURCE_TYPE); |
|
| 502 |
} else {
|
|
| 503 |
log.error("Invalid interface: " + ifaceId);
|
|
| 504 |
throw new DatasourceManagerServiceException("Missing interface: " + ifaceId);
|
|
| 505 |
} |
|
| 506 |
} catch (Exception e) {
|
|
| 507 |
log.error("Error updating API of profile: " + repoId);
|
|
| 508 |
throw new DatasourceManagerServiceException("Error updating API of profile: " + repoId, e);
|
|
| 509 |
} |
|
| 510 |
|
|
| 511 |
return true; |
|
| 512 |
} |
|
| 513 |
|
|
| 514 |
@Override |
|
| 515 |
public List<BrowsableField> listBrowsableFields() throws DatasourceManagerServiceException {
|
|
| 516 |
return Lists.transform(getBrowsableFields(), new Function<XmlBrowsableField, BrowsableField>() {
|
|
| 517 |
|
|
| 518 |
@Override |
|
| 519 |
public BrowsableField apply(final XmlBrowsableField f) {
|
|
| 520 |
return new BrowsableField(f.getId(), f.getLabel()); |
|
| 521 |
} |
|
| 522 |
}); |
|
| 523 |
} |
|
| 524 |
|
|
| 525 |
@Override |
|
| 526 |
public List<BrowseTerm> browseField(final String f) throws DatasourceManagerServiceException {
|
|
| 527 |
|
|
| 528 |
final List<BrowseTerm> list = Lists.newArrayList(); |
|
| 529 |
|
|
| 530 |
try {
|
|
| 531 |
final XmlBrowsableField field = findBrowseField(f); |
|
| 532 |
if (field != null) {
|
|
| 533 |
final StringTemplate st = new StringTemplate(IOUtils.toString(browseRepoApisQueryTmpl.getInputStream())); |
|
| 534 |
st.setAttribute("xpath", field.getXpath());
|
|
| 535 |
|
|
| 536 |
final Map<String, String> terms = fetchVocabularyTerms(field.getVocabulary()); |
|
| 537 |
|
|
| 538 |
for (String s : serviceLocator.getService(ISLookUpService.class).quickSearchProfile(st.toString())) {
|
|
| 539 |
final String[] arr = s.split("@-@-@");
|
|
| 540 |
final String id = arr[0].trim(); |
|
| 541 |
final int count = NumberUtils.toInt(arr[1].trim(), 0); |
|
| 542 |
list.add(new BrowseTerm(id, findLabel(id, terms), count)); |
|
| 543 |
} |
|
| 544 |
} |
|
| 545 |
} catch (Exception e) {
|
|
| 546 |
log.error("Error browsing field " + f, e);
|
|
| 547 |
} |
|
| 548 |
|
|
| 549 |
return list; |
|
| 550 |
} |
|
| 551 |
|
|
| 552 |
private String findLabel(final String code, final Map<String, String> terms) {
|
|
| 553 |
return terms.containsKey(code) ? terms.get(code) : code; |
|
| 554 |
} |
|
| 555 |
|
|
| 556 |
public Map<String, String> fetchVocabularyTerms(final String voc) throws ISLookUpException {
|
|
| 557 |
final String xquery = "for $x in collection('/db/DRIVER/VocabularyDSResources/VocabularyDSResourceType')[.//VOCABULARY_NAME/@code = '"
|
|
| 558 |
+ voc.trim() + "']//TERM return concat($x/@code, ' @@@ ', $x/@english_name)"; |
|
| 559 |
|
|
| 560 |
final Map<String, String> map = Maps.newHashMap(); |
|
| 561 |
for (String s : serviceLocator.getService(ISLookUpService.class).quickSearchProfile(xquery)) {
|
|
| 562 |
final String[] arr = s.split("@@@");
|
|
| 563 |
map.put(arr[0].trim(), arr[1].trim()); |
|
| 564 |
} |
|
| 565 |
return map; |
|
| 566 |
} |
|
| 567 |
|
|
| 568 |
private XmlBrowsableField findBrowseField(final String id) {
|
|
| 569 |
for (XmlBrowsableField f : getBrowsableFields()) {
|
|
| 570 |
if (f.getId().equals(id)) { return f; }
|
|
| 571 |
} |
|
| 572 |
return null; |
|
| 573 |
} |
|
| 574 |
|
|
| 575 |
@Override |
|
| 576 |
public List<SearchInterfacesEntry> searchInterface(final String field, final String value) throws DatasourceManagerServiceException {
|
|
| 577 |
try {
|
|
| 578 |
|
|
| 579 |
final StringTemplate st = new StringTemplate(); |
|
| 580 |
st.setTemplate(IOUtils.toString(findRepoApisQueryTmpl.getInputStream())); |
|
| 581 |
|
|
| 582 |
if (field.equalsIgnoreCase("__search__")) {
|
|
| 583 |
st.setAttribute("cond", "contains(../..//(*|@*)/lower-case(.), '" + StringEscapeUtils.escapeXml(value.toLowerCase()) + "')");
|
|
| 584 |
} else {
|
|
| 585 |
final XmlBrowsableField f = findBrowseField(field); |
|
| 586 |
if (f != null) {
|
|
| 587 |
st.setAttribute("cond", f.getXpath() + "='" + StringEscapeUtils.escapeXml(value) + "'");
|
|
| 588 |
} else {
|
|
| 589 |
return Lists.newArrayList(); |
|
| 590 |
} |
|
| 591 |
} |
|
| 592 |
|
|
| 593 |
final String query = st.toString(); |
|
| 594 |
|
|
| 595 |
final SAXReader reader = new SAXReader(); |
|
| 596 |
|
|
| 597 |
final List<String> list = serviceLocator.getService(ISLookUpService.class).quickSearchProfile(query); |
|
| 598 |
|
|
| 599 |
return Lists.transform(list, new Function<String, SearchInterfacesEntry>() {
|
|
| 600 |
|
|
| 601 |
@Override |
|
| 602 |
public SearchInterfacesEntry apply(final String s) {
|
|
| 603 |
final SearchInterfacesEntry iface = new SearchInterfacesEntry(); |
|
| 604 |
try {
|
|
| 605 |
final Document doc = reader.read(new StringReader(s)); |
|
| 606 |
final String country = doc.valueOf("//REPO/@country");
|
|
| 607 |
|
|
| 608 |
iface.setRepoId(doc.valueOf("//REPO/@id"));
|
|
| 609 |
iface.setRepoCountry(StringUtils.isEmpty(country) ? "-" : country.toUpperCase()); |
|
| 610 |
iface.setRepoName(doc.valueOf("//REPO/@name"));
|
|
| 611 |
iface.setRepoPrefix(doc.valueOf("//REPO/@prefix"));
|
|
| 612 |
|
|
| 613 |
final Node ifcNode = doc.selectSingleNode("//INTERFACE");
|
|
| 614 |
|
|
| 615 |
iface.setId(ifcNode.valueOf("./@id"));
|
|
| 616 |
iface.setActive(Boolean.valueOf(ifcNode.valueOf("./@active")));
|
|
| 617 |
iface.setProtocol(ifcNode.valueOf("./ACCESS_PROTOCOL/text()"));
|
|
| 618 |
|
|
| 619 |
final String overCompliance = ifcNode.valueOf("./INTERFACE_EXTRA_FIELD[@name='overriding_compliance']");
|
|
| 620 |
if (StringUtils.isEmpty(overCompliance)) {
|
|
| 621 |
iface.setCompliance(ifcNode.valueOf("@compliance"));
|
|
| 622 |
} else {
|
|
| 623 |
iface.setCompliance(overCompliance); |
|
| 624 |
} |
|
| 625 |
|
|
| 626 |
final String lastAggregationDate = ifcNode.valueOf("./INTERFACE_EXTRA_FIELD[@name='last_aggregation_date']");
|
|
| 627 |
if (!StringUtils.isEmpty(lastAggregationDate)) {
|
|
| 628 |
iface.setAggrDate(lastAggregationDate); |
|
| 629 |
} else {
|
|
| 630 |
final String lastDownloadDate = ifcNode.valueOf("./INTERFACE_EXTRA_FIELD[@name='last_download_date']");
|
|
| 631 |
if (!StringUtils.isEmpty(lastDownloadDate)) {
|
|
| 632 |
iface.setAggrDate(lastDownloadDate); |
|
| 633 |
} |
|
| 634 |
} |
|
| 635 |
final String lastAggregationTotal = ifcNode.valueOf("./INTERFACE_EXTRA_FIELD[@name='last_aggregation_total']");
|
|
| 636 |
if (StringUtils.isEmpty(lastAggregationTotal)) {
|
|
| 637 |
final String lastDownloadTotal = ifcNode.valueOf("./INTERFACE_EXTRA_FIELD[@name='last_download_total']");
|
|
| 638 |
if (StringUtils.isEmpty(lastDownloadTotal)) {
|
|
| 639 |
iface.setAggrTotal(0); |
|
| 640 |
} else {
|
|
| 641 |
iface.setAggrTotal(NumberUtils.toInt(lastDownloadTotal, 0)); |
|
| 642 |
} |
|
| 643 |
} else {
|
|
| 644 |
iface.setAggrTotal(NumberUtils.toInt(lastAggregationTotal, 0)); |
|
| 645 |
} |
|
| 646 |
} catch (Exception e) {
|
|
| 647 |
log.error(e); |
|
| 648 |
} |
|
| 649 |
return iface; |
|
| 650 |
} |
|
| 651 |
}); |
|
| 652 |
} catch (Exception e) {
|
|
| 653 |
log.error("Error searching field " + field + " - value: " + value, e);
|
|
| 654 |
} |
|
| 655 |
return Lists.newArrayList(); |
|
| 656 |
} |
|
| 657 |
|
|
| 658 |
@Override |
|
| 659 |
public List<RepositoryMapEntry> getRepositoryMap() throws DatasourceManagerServiceException {
|
|
| 660 |
try {
|
|
| 661 |
final SAXReader reader = new SAXReader(); |
|
| 662 |
|
|
| 663 |
final String query = IOUtils.toString(findReposMapQuery.getInputStream()); |
|
| 664 |
final List<String> list = serviceLocator.getService(ISLookUpService.class).quickSearchProfile(query); |
|
| 665 |
return Lists.transform(list, new Function<String, RepositoryMapEntry>() {
|
|
| 666 |
|
|
| 667 |
@Override |
|
| 668 |
public RepositoryMapEntry apply(final String s) {
|
|
| 669 |
final RepositoryMapEntry r = new RepositoryMapEntry(); |
|
| 670 |
|
|
| 671 |
try {
|
|
| 672 |
final Document doc = reader.read(new StringReader(s)); |
|
| 673 |
r.setId(doc.valueOf("//dsId"));
|
|
| 674 |
r.setName(doc.valueOf("//name"));
|
|
| 675 |
r.setLat(Float.parseFloat(doc.valueOf("//lat")));
|
|
| 676 |
r.setLng(Float.parseFloat(doc.valueOf("//lng")));
|
|
| 677 |
} catch (Exception e) {
|
|
| 678 |
log.error(e); |
|
| 679 |
} |
|
| 680 |
return r; |
|
| 681 |
} |
|
| 682 |
}); |
|
| 683 |
} catch (Exception e) {
|
|
| 684 |
log.error("Error obtaing repo map entries", e);
|
|
| 685 |
} |
|
| 686 |
return Lists.newArrayList(); |
|
| 687 |
} |
|
| 688 |
|
|
| 689 |
private List<XmlBrowsableField> getBrowsableFields() {
|
|
| 690 |
return browsableFields; |
|
| 691 |
} |
|
| 692 |
|
|
| 693 |
@Required |
|
| 694 |
public void setBrowsableFields(final List<XmlBrowsableField> browsableFields) {
|
|
| 695 |
this.browsableFields = browsableFields; |
|
| 696 |
} |
|
| 697 |
|
|
| 698 |
@Override |
|
| 699 |
public List<SimpleDatasourceDesc> simpleListDatasourcesByType(final String type) throws DatasourceManagerServiceException {
|
|
| 700 |
try {
|
|
| 701 |
final List<SimpleDatasourceDesc> list = Lists.newArrayList(); |
|
| 702 |
|
|
| 703 |
final StringTemplate st = new StringTemplate(IOUtils.toString(simpleFindReposQueryTmpl.getInputStream())); |
|
| 704 |
st.setAttribute("type", type);
|
|
| 705 |
|
|
| 706 |
for (String s : serviceLocator.getService(ISLookUpService.class).quickSearchProfile(st.toString())) {
|
|
| 707 |
final SimpleDatasourceDesc r = new SimpleDatasourceDesc(); |
|
| 708 |
final String[] arr = s.split("@=@");
|
|
| 709 |
r.setId(arr[0].trim()); |
|
| 710 |
r.setName(arr[1].trim()); |
|
| 711 |
r.setOrigId(arr[2].trim()); |
|
| 712 |
r.setApis(Sets.newHashSet(arr[3].replaceAll("\\s", "").split(",")));
|
|
| 713 |
r.setValid("true".equals(arr[4].trim()));
|
|
| 714 |
r.setTypology(type); |
|
| 715 |
list.add(r); |
|
| 716 |
} |
|
| 717 |
|
|
| 718 |
Collections.sort(list); |
|
| 719 |
|
|
| 720 |
return list; |
|
| 721 |
} catch (Exception e) {
|
|
| 722 |
log.error("Error listing repos", e);
|
|
| 723 |
} |
|
| 724 |
return Lists.newArrayList(); |
|
| 725 |
} |
|
| 726 |
|
|
| 727 |
public String getEnvironment() {
|
|
| 728 |
return environment; |
|
| 729 |
} |
|
| 730 |
|
|
| 731 |
@Required |
|
| 732 |
public void setEnvironment(final String environment) {
|
|
| 733 |
this.environment = environment; |
|
| 734 |
} |
|
| 735 |
|
|
| 736 |
} |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/java/eu/dnetlib/enabling/datasources/DatasourceDescToProfile.java | ||
|---|---|---|
| 1 |
package eu.dnetlib.enabling.datasources; |
|
| 2 |
|
|
| 3 |
import com.google.common.base.Function; |
|
| 4 |
import eu.dnetlib.enabling.datasources.rmi.DatasourceDesc; |
|
| 5 |
import eu.dnetlib.enabling.datasources.rmi.IfaceDesc; |
|
| 6 |
import eu.dnetlib.miscutils.datetime.DateUtils; |
|
| 7 |
import org.apache.commons.logging.Log; |
|
| 8 |
import org.apache.commons.logging.LogFactory; |
|
| 9 |
import org.dom4j.DocumentHelper; |
|
| 10 |
import org.dom4j.Element; |
|
| 11 |
|
|
| 12 |
public class DatasourceDescToProfile implements Function<DatasourceDesc, String> {
|
|
| 13 |
private static final Log log = LogFactory.getLog(DatasourceDescToProfile.class); |
|
| 14 |
|
|
| 15 |
public DatasourceDescToProfile(final String environment) {
|
|
| 16 |
this.environment = environment; |
|
| 17 |
} |
|
| 18 |
|
|
| 19 |
private String environment; |
|
| 20 |
|
|
| 21 |
public static String convert(final DatasourceDesc ds, String environment) throws Exception {
|
|
| 22 |
final Element root = DocumentHelper.createElement("RESOURCE_PROFILE");
|
|
| 23 |
|
|
| 24 |
final Element header = root.addElement("HEADER");
|
|
| 25 |
header.addElement("RESOURCE_IDENTIFIER").addAttribute("value", "");
|
|
| 26 |
header.addElement("RESOURCE_TYPE").addAttribute("value", "RepositoryServiceResourceType");
|
|
| 27 |
header.addElement("RESOURCE_KIND").addAttribute("value", "RepositoryServiceResources");
|
|
| 28 |
header.addElement("RESOURCE_URI").addAttribute("value", "");
|
|
| 29 |
header.addElement("DATE_OF_CREATION").addAttribute("value", DateUtils.now_ISO8601());
|
|
| 30 |
header.addElement("PROTOCOL");
|
|
| 31 |
|
|
| 32 |
final Element body = root.addElement("BODY");
|
|
| 33 |
final Element conf = body.addElement("CONFIGURATION");
|
|
| 34 |
conf.addElement("DATASOURCE_TYPE").setText(ds.getDatasourceClass());
|
|
| 35 |
|
|
| 36 |
final Element origId = conf.addElement("DATASOURCE_ORIGINAL_ID");
|
|
| 37 |
origId.addAttribute("provenance", "D-NET");
|
|
| 38 |
origId.setText(ds.getId()); |
|
| 39 |
|
|
| 40 |
conf.addElement("DATASOURCE_AGGREGATED").setText("false");
|
|
| 41 |
conf.addElement("ENVIRONMENTS").addElement("ENVIRONMENT").setText(environment);
|
|
| 42 |
conf.addElement("TYPOLOGY").setText(ds.getTypology());
|
|
| 43 |
conf.addElement("MAX_SIZE_OF_DATASTRUCTURE").setText("0");
|
|
| 44 |
conf.addElement("AVAILABLE_DISKSPACE").setText("0");
|
|
| 45 |
conf.addElement("MAX_NUMBER_OF_DATASTRUCTURE").setText("0");
|
|
| 46 |
|
|
| 47 |
conf.addElement("OFFICIAL_NAME").setText(ds.getOfficialName());
|
|
| 48 |
conf.addElement("ENGLISH_NAME").setText(ds.getEnglishName());
|
|
| 49 |
conf.addElement("ICON_URI").setText(ds.getLogoUrl());
|
|
| 50 |
conf.addElement("COUNTRY").setText(ds.getCountryCode());
|
|
| 51 |
|
|
| 52 |
final Element location = conf.addElement("LOCATION");
|
|
| 53 |
location.addElement("LONGITUDE").setText("" + ds.getLongitude());
|
|
| 54 |
location.addElement("LATITUDE").setText("" + ds.getLatitude());
|
|
| 55 |
location.addElement("TIMEZONE").setText("" + ds.getTimezone());
|
|
| 56 |
|
|
| 57 |
conf.addElement("REPOSITORY_WEBPAGE").setText(ds.getWebsiteUrl());
|
|
| 58 |
conf.addElement("REPOSITORY_INSTITUTION").setText(ds.getOrganization());
|
|
| 59 |
conf.addElement("ADMIN_INFO").setText(ds.getContactEmail());
|
|
| 60 |
|
|
| 61 |
final Element ifaces = conf.addElement("INTERFACES");
|
|
| 62 |
for (IfaceDesc ifc : ds.getInterfaces()) {
|
|
| 63 |
ifaces.add(IfaceDescToNode.convert(ifc)); |
|
| 64 |
} |
|
| 65 |
final Element extraFields = conf.addElement("EXTRA_FIELDS");
|
|
| 66 |
addExtraField(extraFields, "ACTIVATION_ID", ds.getActivationId()); |
|
| 67 |
addExtraField(extraFields, "NamespacePrefix", ds.getNamespacePrefix()); |
|
| 68 |
addExtraField(extraFields, "aggregatorName", ds.getAggregator()); |
|
| 69 |
addExtraField(extraFields, "dateOfCollection", "" + ds.getDateOfCollection()); |
|
| 70 |
addExtraField(extraFields, "dateOfValidation", "" + ds.getDateOfValidation()); |
|
| 71 |
conf.addElement("REGISTERED_BY");
|
|
| 72 |
|
|
| 73 |
final Element status = body.addElement("STATUS");
|
|
| 74 |
status.addElement("NUMBER_OF_OBJECTS").setText("0");
|
|
| 75 |
status.addElement("LAST_UPDATE").addAttribute("value", DateUtils.now_ISO8601());
|
|
| 76 |
|
|
| 77 |
final Element qos = body.addElement("QOS");
|
|
| 78 |
qos.addElement("AVAILABILITY").setText("0");
|
|
| 79 |
qos.addElement("CAPACITY");
|
|
| 80 |
qos.addElement("THROUGHPUT").setText("0");
|
|
| 81 |
|
|
| 82 |
body.addElement("SECURITY_PARAMETERS");
|
|
| 83 |
body.addElement("BLACKBOARD");
|
|
| 84 |
|
|
| 85 |
return root.asXML(); |
|
| 86 |
} |
|
| 87 |
|
|
| 88 |
private static void addExtraField(final Element extraFields, final String field, final String value) {
|
|
| 89 |
final Element f = extraFields.addElement("FIELD");
|
|
| 90 |
f.addElement("key").setText(field);
|
|
| 91 |
f.addElement("value").setText(value != null ? value : "");
|
|
| 92 |
} |
|
| 93 |
|
|
| 94 |
@Override |
|
| 95 |
public String apply(final DatasourceDesc ds) {
|
|
| 96 |
try {
|
|
| 97 |
return DatasourceDescToProfile.convert(ds, environment); |
|
| 98 |
} catch (Exception e) {
|
|
| 99 |
log.error("Error convering profile", e);
|
|
| 100 |
return null; |
|
| 101 |
} |
|
| 102 |
} |
|
| 103 |
} |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/java/eu/dnetlib/enabling/datasources/IfaceDescToNode.java | ||
|---|---|---|
| 1 |
package eu.dnetlib.enabling.datasources; |
|
| 2 |
|
|
| 3 |
import java.util.Map.Entry; |
|
| 4 |
|
|
| 5 |
import org.dom4j.DocumentHelper; |
|
| 6 |
import org.dom4j.Element; |
|
| 7 |
|
|
| 8 |
import eu.dnetlib.enabling.datasources.rmi.IfaceDesc; |
|
| 9 |
|
|
| 10 |
public class IfaceDescToNode {
|
|
| 11 |
|
|
| 12 |
public static Element convert(final IfaceDesc iface) throws Exception {
|
|
| 13 |
|
|
| 14 |
final Element ifcNode = DocumentHelper.createElement("INTERFACE");
|
|
| 15 |
ifcNode.addAttribute("id", iface.getId());
|
|
| 16 |
ifcNode.addAttribute("label", iface.getTypology() + " (" + iface.getCompliance() + ")");
|
|
| 17 |
ifcNode.addAttribute("compliance", iface.getCompliance());
|
|
| 18 |
ifcNode.addAttribute("typology", iface.getTypology());
|
|
| 19 |
ifcNode.addAttribute("contentDescription", iface.getContentDescription());
|
|
| 20 |
ifcNode.addAttribute("active", Boolean.toString(iface.getActive()));
|
|
| 21 |
ifcNode.addAttribute("removable", Boolean.toString(iface.getRemovable()));
|
|
| 22 |
|
|
| 23 |
final Element acProtoNode = ifcNode.addElement("ACCESS_PROTOCOL");
|
|
| 24 |
|
|
| 25 |
for (Entry<String, String> e : iface.getAccessParams().entrySet()) {
|
|
| 26 |
acProtoNode.addAttribute(e.getKey(), e.getValue()); |
|
| 27 |
} |
|
| 28 |
acProtoNode.setText(iface.getAccessProtocol()); |
|
| 29 |
|
|
| 30 |
ifcNode.addElement("BASE_URL").setText(iface.getBaseUrl());
|
|
| 31 |
|
|
| 32 |
for (Entry<String, String> e : iface.getExtraFields().entrySet()) {
|
|
| 33 |
final Element field = ifcNode.addElement("INTERFACE_EXTRA_FIELD");
|
|
| 34 |
field.addAttribute("name", e.getKey());
|
|
| 35 |
field.setText(e.getValue()); |
|
| 36 |
} |
|
| 37 |
|
|
| 38 |
return ifcNode; |
|
| 39 |
} |
|
| 40 |
} |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/java/eu/dnetlib/enabling/datasources/ProfileToDatasourceDesc.java | ||
|---|---|---|
| 1 |
package eu.dnetlib.enabling.datasources; |
|
| 2 |
|
|
| 3 |
import java.io.StringReader; |
|
| 4 |
|
|
| 5 |
import org.apache.commons.lang.BooleanUtils; |
|
| 6 |
import org.apache.commons.lang.math.NumberUtils; |
|
| 7 |
import org.apache.commons.logging.Log; |
|
| 8 |
import org.apache.commons.logging.LogFactory; |
|
| 9 |
import org.dom4j.Document; |
|
| 10 |
import org.dom4j.Element; |
|
| 11 |
import org.dom4j.Node; |
|
| 12 |
import org.dom4j.io.SAXReader; |
|
| 13 |
|
|
| 14 |
import com.google.common.base.Function; |
|
| 15 |
|
|
| 16 |
import eu.dnetlib.enabling.datasources.rmi.DatasourceDesc; |
|
| 17 |
import eu.dnetlib.enabling.datasources.rmi.IfaceDesc; |
|
| 18 |
import eu.dnetlib.miscutils.datetime.DateUtils; |
|
| 19 |
|
|
| 20 |
public class ProfileToDatasourceDesc implements Function<String, DatasourceDesc> {
|
|
| 21 |
|
|
| 22 |
private static final Log log = LogFactory.getLog(ProfileToDatasourceDesc.class); |
|
| 23 |
|
|
| 24 |
@Override |
|
| 25 |
public DatasourceDesc apply(final String profile) {
|
|
| 26 |
try {
|
|
| 27 |
return ProfileToDatasourceDesc.convert(profile); |
|
| 28 |
} catch (Exception e) {
|
|
| 29 |
log.error("Error convering profile", e);
|
|
| 30 |
return null; |
|
| 31 |
} |
|
| 32 |
} |
|
| 33 |
|
|
| 34 |
public static DatasourceDesc convert(final String profile) throws Exception {
|
|
| 35 |
final SAXReader reader = new SAXReader(); |
|
| 36 |
final Document doc = reader.read(new StringReader(profile)); |
|
| 37 |
|
|
| 38 |
final DatasourceDesc ds = new DatasourceDesc(); |
|
| 39 |
ds.setId(doc.valueOf("//RESOURCE_IDENTIFIER/@value"));
|
|
| 40 |
ds.setDatasourceClass(doc.valueOf("//DATASOURCE_TYPE"));
|
|
| 41 |
ds.setTypology(doc.valueOf("//TYPOLOGY"));
|
|
| 42 |
ds.setOfficialName(doc.valueOf("//OFFICIAL_NAME"));
|
|
| 43 |
ds.setEnglishName(doc.valueOf("//ENGLISH_NAME"));
|
|
| 44 |
ds.setCountryCode(doc.valueOf("//COUNTRY"));
|
|
| 45 |
ds.setLongitude(NumberUtils.toDouble(doc.valueOf("//LOCATION/LONGITUDE"), 0.0));
|
|
| 46 |
ds.setLatitude(NumberUtils.toDouble(doc.valueOf("//LOCATION/LATITUDE"), 0.0));
|
|
| 47 |
ds.setTimezone(NumberUtils.toDouble(doc.valueOf("//LOCATION/TIMEZONE"), 0.0));
|
|
| 48 |
ds.setWebsiteUrl(doc.valueOf("//REPOSITORY_WEBPAGE"));
|
|
| 49 |
ds.setOrganization(doc.valueOf("//REPOSITORY_INSTITUTION"));
|
|
| 50 |
ds.setContactEmail(doc.valueOf("//ADMIN_INFO"));
|
|
| 51 |
|
|
| 52 |
for (Object o : doc.selectNodes("//INTERFACES/INTERFACE")) {
|
|
| 53 |
final Element n = (Element) o; |
|
| 54 |
|
|
| 55 |
final IfaceDesc ifc = new IfaceDesc(); |
|
| 56 |
|
|
| 57 |
ifc.setId(n.valueOf("@id"));
|
|
| 58 |
ifc.setCompliance(n.valueOf("@compliance"));
|
|
| 59 |
ifc.setTypology(n.valueOf("@typology"));
|
|
| 60 |
ifc.setContentDescription(n.valueOf("@contentDescription"));
|
|
| 61 |
ifc.setActive(BooleanUtils.toBoolean(n.valueOf("@active")));
|
|
| 62 |
ifc.setRemovable(BooleanUtils.toBoolean(n.valueOf("@removable")));
|
|
| 63 |
ifc.setBaseUrl(n.valueOf("./BASE_URL"));
|
|
| 64 |
ifc.setAccessProtocol(n.valueOf("./ACCESS_PROTOCOL"));
|
|
| 65 |
|
|
| 66 |
for (Object o1 : n.selectNodes("./ACCESS_PROTOCOL/@*")) {
|
|
| 67 |
final Node attr = (Node) o1; |
|
| 68 |
ifc.getAccessParams().put(attr.getName(), attr.getText()); |
|
| 69 |
} |
|
| 70 |
for (Object o1 : n.selectNodes("./INTERFACE_EXTRA_FIELD")) {
|
|
| 71 |
final Node f = (Node) o1; |
|
| 72 |
ifc.getExtraFields().put(f.valueOf("@name"), f.getText());
|
|
| 73 |
} |
|
| 74 |
|
|
| 75 |
ds.getInterfaces().add(ifc); |
|
| 76 |
} |
|
| 77 |
|
|
| 78 |
final DateUtils dateUtils = new DateUtils(); |
|
| 79 |
for (Object o : doc.selectNodes("//EXTRA_FIELDS/EXTRA_FIELD")) {
|
|
| 80 |
final String k = ((Element) o).valueOf("./key").trim();
|
|
| 81 |
final String v = ((Element) o).valueOf("./value").trim();
|
|
| 82 |
|
|
| 83 |
if (k.equalsIgnoreCase("ACTIVATION_ID")) {
|
|
| 84 |
ds.setActivationId(v); |
|
| 85 |
} else if (k.equalsIgnoreCase("NamespacePrefix")) {
|
|
| 86 |
ds.setNamespacePrefix(v); |
|
| 87 |
} else if (k.equalsIgnoreCase("aggregatorName")) {
|
|
| 88 |
ds.setAggregator(v); |
|
| 89 |
} else if (k.equalsIgnoreCase("dateOfCollection")) {
|
|
| 90 |
ds.setDateOfCollection(dateUtils.parse(v)); |
|
| 91 |
} else if (k.equalsIgnoreCase("dateOfValidation")) {
|
|
| 92 |
ds.setDateOfValidation(dateUtils.parse(v)); |
|
| 93 |
} |
|
| 94 |
} |
|
| 95 |
|
|
| 96 |
return ds; |
|
| 97 |
} |
|
| 98 |
} |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/java/eu/dnetlib/enabling/datasources/XmlBrowsableField.java | ||
|---|---|---|
| 1 |
package eu.dnetlib.enabling.datasources; |
|
| 2 |
|
|
| 3 |
import eu.dnetlib.enabling.datasources.rmi.BrowsableField; |
|
| 4 |
|
|
| 5 |
public class XmlBrowsableField extends BrowsableField {
|
|
| 6 |
|
|
| 7 |
private String xpath; |
|
| 8 |
private String vocabulary; |
|
| 9 |
|
|
| 10 |
public XmlBrowsableField() {
|
|
| 11 |
super(); |
|
| 12 |
} |
|
| 13 |
|
|
| 14 |
public XmlBrowsableField(final String id, final String label) {
|
|
| 15 |
super(id, label); |
|
| 16 |
} |
|
| 17 |
|
|
| 18 |
public XmlBrowsableField(final String id, final String label, final String xpath, final String vocabulary) {
|
|
| 19 |
super(id, label); |
|
| 20 |
this.xpath = xpath; |
|
| 21 |
this.vocabulary = vocabulary; |
|
| 22 |
} |
|
| 23 |
|
|
| 24 |
public String getXpath() {
|
|
| 25 |
return xpath; |
|
| 26 |
} |
|
| 27 |
|
|
| 28 |
public void setXpath(final String xpath) {
|
|
| 29 |
this.xpath = xpath; |
|
| 30 |
} |
|
| 31 |
|
|
| 32 |
public String getVocabulary() {
|
|
| 33 |
return vocabulary; |
|
| 34 |
} |
|
| 35 |
|
|
| 36 |
public void setVocabulary(final String vocabulary) {
|
|
| 37 |
this.vocabulary = vocabulary; |
|
| 38 |
} |
|
| 39 |
|
|
| 40 |
} |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/resources/eu/dnetlib/enabling/datasources/applicationContext-datasource-manager-service.properties | ||
|---|---|---|
| 1 |
dnet.datasource.environment = D-Net |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/resources/eu/dnetlib/enabling/datasources/applicationContext-datasource-manager-service.xml | ||
|---|---|---|
| 1 |
<?xml version="1.0" encoding="UTF-8"?> |
|
| 2 |
<beans xmlns="http://www.springframework.org/schema/beans" |
|
| 3 |
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:jaxws="http://cxf.apache.org/jaxws" |
|
| 4 |
xmlns:sec="http://cxf.apache.org/configuration/security" xmlns:wsa="http://cxf.apache.org/ws/addressing" |
|
| 5 |
xmlns:p="http://www.springframework.org/schema/p" xmlns:http="http://cxf.apache.org/transports/http/configuration" |
|
| 6 |
xmlns:t="http://dnetlib.eu/springbeans/t" xmlns:template="http://dnetlib.eu/springbeans/template" |
|
| 7 |
xmlns:util="http://www.springframework.org/schema/util" |
|
| 8 |
xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans.xsd |
|
| 9 |
http://cxf.apache.org/ws/addressing http://cxf.apache.org/schemas/ws-addr-conf.xsd |
|
| 10 |
http://cxf.apache.org/configuration/security http://cxf.apache.org/schemas/configuration/security.xsd |
|
| 11 |
http://cxf.apache.org/transports/http/configuration http://cxf.apache.org/schemas/configuration/http-conf.xsd |
|
| 12 |
http://cxf.apache.org/jaxws http://cxf.apache.org/schemas/jaxws.xsd |
|
| 13 |
http://www.springframework.org/schema/util http://www.springframework.org/schema/util/spring-util-2.0.xsd |
|
| 14 |
http://dnetlib.eu/springbeans/template http://dnetlib.eu/springbeans/template.xsd"> |
|
| 15 |
|
|
| 16 |
<bean id="datasourceManagerService" |
|
| 17 |
class="eu.dnetlib.enabling.datasources.DatasourceManagerServiceImpl" p:environment="${dnet.datasource.environment}">
|
|
| 18 |
<property name="browsableFields"> |
|
| 19 |
<list> |
|
| 20 |
<bean class="eu.dnetlib.enabling.datasources.XmlBrowsableField" |
|
| 21 |
p:id="country" p:label="Datasource countries" p:xpath="../../COUNTRY/text()" |
|
| 22 |
p:vocabulary="dnet:countries" /> |
|
| 23 |
<bean class="eu.dnetlib.enabling.datasources.XmlBrowsableField" |
|
| 24 |
p:id="type" p:label="API typologies" p:xpath="@typology/string()" |
|
| 25 |
p:vocabulary="dnet:datasource_typologies" /> |
|
| 26 |
<bean class="eu.dnetlib.enabling.datasources.XmlBrowsableField" |
|
| 27 |
p:id="protocol" p:label="API protocols" p:xpath="ACCESS_PROTOCOL/text()" |
|
| 28 |
p:vocabulary="dnet:protocols" /> |
|
| 29 |
<bean class="eu.dnetlib.enabling.datasources.XmlBrowsableField" |
|
| 30 |
p:id="compliance" p:label="API compatibility levels" |
|
| 31 |
p:xpath="concat(substring(./INTERFACE_EXTRA_FIELD[@name='overriding_compliance'], 1, number(boolean(./INTERFACE_EXTRA_FIELD[@name='overriding_compliance'])) * string-length(./INTERFACE_EXTRA_FIELD[@name='overriding_compliance'])), substring(@compliance, 1, number(not(boolean(./INTERFACE_EXTRA_FIELD[@name='overriding_compliance']))) * string-length(@compliance)))" |
|
| 32 |
p:vocabulary="dnet:compatibilityLevel" /> |
|
| 33 |
</list> |
|
| 34 |
</property> |
|
| 35 |
</bean> |
|
| 36 |
|
|
| 37 |
<!-- endpoints --> |
|
| 38 |
<jaxws:endpoint id="datasourceManagerServiceEndpoint" |
|
| 39 |
implementor="#datasourceManagerService" |
|
| 40 |
implementorClass="eu.dnetlib.enabling.datasources.rmi.DatasourceManagerService" |
|
| 41 |
address="/datasourceManager" /> |
|
| 42 |
|
|
| 43 |
<template:instance name="serviceRegistrationManager" |
|
| 44 |
t:serviceRegistrationManagerClass="eu.dnetlib.enabling.tools.registration.ValidatingServiceRegistrationManagerImpl" |
|
| 45 |
t:name="datasourceManagerServiceRegistrationManager" t:service="datasourceManagerService" |
|
| 46 |
t:endpoint="datasourceManagerServiceEndpoint" t:jobScheduler="jobScheduler" /> |
|
| 47 |
|
|
| 48 |
</beans> |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/resources/eu/dnetlib/enabling/datasources/templates/findRepos.xquery.st | ||
|---|---|---|
| 1 |
for \$x in collection('/db/DRIVER/RepositoryServiceResources/RepositoryServiceResourceType')
|
|
| 2 |
$if(conds)$ |
|
| 3 |
where $conds.keys:{xpath| \$x$xpath$ = '$conds.(xpath)$'}; separator=" and "$
|
|
| 4 |
$endif$ |
|
| 5 |
return \$x |
|
| 6 |
, |
|
| 7 |
for \$x in collection('/db/DRIVER/PendingRepositoryResources/RepositoryServiceResourceType')
|
|
| 8 |
$if(conds)$ |
|
| 9 |
where $conds.keys:{xpath| \$x$xpath$ = '$conds.(xpath)$'}; separator=" and "$
|
|
| 10 |
$endif$ |
|
| 11 |
return \$x |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/resources/eu/dnetlib/enabling/datasources/templates/findReposMap.xquery | ||
|---|---|---|
| 1 |
for $x in |
|
| 2 |
collection('/db/DRIVER/RepositoryServiceResources/RepositoryServiceResourceType')
|
|
| 3 |
where |
|
| 4 |
$x//NUMBER_OF_OBJECTS != 0 and not($x//LATITUDE = 0 and $x//LONGITUDE = 0) |
|
| 5 |
return |
|
| 6 |
<ds> |
|
| 7 |
<dsId>{$x//RESOURCE_IDENTIFIER/@value/string()}</dsId>
|
|
| 8 |
<name>{$x//OFFICIAL_NAME/text()}</name>
|
|
| 9 |
<lat>{$x//LATITUDE/text()}</lat>
|
|
| 10 |
<lng>{$x//LONGITUDE/text()}</lng>
|
|
| 11 |
</ds> |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/resources/eu/dnetlib/enabling/datasources/templates/findRepoApis.xquery.st | ||
|---|---|---|
| 1 |
for \$x in |
|
| 2 |
collection('/db/DRIVER/RepositoryServiceResources/RepositoryServiceResourceType')//INTERFACE[$cond$]
|
|
| 3 |
return |
|
| 4 |
<ROW> |
|
| 5 |
<REPO |
|
| 6 |
id="{\$x/../../../../HEADER/RESOURCE_IDENTIFIER/@value/string()}"
|
|
| 7 |
name="{\$x/../../OFFICIAL_NAME/text()}"
|
|
| 8 |
country="{\$x/../../COUNTRY/text()}"
|
|
| 9 |
prefix="{\$x/../..//EXTRA_FIELDS/FIELD[./key='NamespacePrefix']/value}" />
|
|
| 10 |
{\$x}
|
|
| 11 |
</ROW> |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/resources/eu/dnetlib/enabling/datasources/templates/simpleFindRepos.xquery.st | ||
|---|---|---|
| 1 |
for \$x in |
|
| 2 |
collection('/db/DRIVER/RepositoryServiceResources/RepositoryServiceResourceType')
|
|
| 3 |
where |
|
| 4 |
\$x//DATASOURCE_TYPE = '$type$' |
|
| 5 |
return |
|
| 6 |
concat(\$x//RESOURCE_IDENTIFIER/@value, ' @=@ ', \$x//OFFICIAL_NAME, ' @=@ ', \$x//DATASOURCE_ORIGINAL_ID, ' @=@ ', string-join(\$x//INTERFACE/@id, ','), ' @=@ true'), |
|
| 7 |
for \$x in |
|
| 8 |
collection('/db/DRIVER/PendingRepositoryResources/RepositoryServiceResourceType')
|
|
| 9 |
where |
|
| 10 |
\$x//DATASOURCE_TYPE = '$type$' |
|
| 11 |
return |
|
| 12 |
concat(\$x//RESOURCE_IDENTIFIER/@value, ' @=@ ', \$x//OFFICIAL_NAME, ' @=@ ', \$x//DATASOURCE_ORIGINAL_ID, ' @=@ ', string-join(\$x//INTERFACE/@id, ','), ' @=@ false') |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/src/main/resources/eu/dnetlib/enabling/datasources/templates/browseRepoApis.xquery.st | ||
|---|---|---|
| 1 |
let \$list := collection('/db/DRIVER/RepositoryServiceResources/RepositoryServiceResourceType')//INTERFACE/$xpath$
|
|
| 2 |
|
|
| 3 |
for \$x in distinct-values(\$list) |
|
| 4 |
where string-length(\$x) > 0 |
|
| 5 |
return concat(\$x, ' @-@-@ ', count(\$list[.=\$x])) |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/.springBeans | ||
|---|---|---|
| 1 |
<?xml version="1.0" encoding="UTF-8"?> |
|
| 2 |
<beansProjectDescription> |
|
| 3 |
<version>1</version> |
|
| 4 |
<pluginVersion><![CDATA[3.6.2.201410090854-RELEASE]]></pluginVersion> |
|
| 5 |
<configSuffixes> |
|
| 6 |
<configSuffix><![CDATA[xml]]></configSuffix> |
|
| 7 |
</configSuffixes> |
|
| 8 |
<enableImports><![CDATA[false]]></enableImports> |
|
| 9 |
<configs> |
|
| 10 |
<config>src/main/resources/eu/dnetlib/enabling/datasources/applicationContext-datasource-manager-service.xml</config> |
|
| 11 |
</configs> |
|
| 12 |
<autoconfigs> |
|
| 13 |
</autoconfigs> |
|
| 14 |
<configSets> |
|
| 15 |
</configSets> |
|
| 16 |
</beansProjectDescription> |
|
| modules/dnet-datasource-manager-service/tags/dnet-datasource-manager-service-1.0.4/deploy.info | ||
|---|---|---|
| 1 |
{"type_source": "SVN", "goal": "package -U -T 4C source:jar", "url": "http://svn-public.driver.research-infrastructures.eu/driver/dnet40/modules/dnet-datasource-manager-service/trunk/", "deploy_repository": "dnet4-snapshots", "version": "4", "mail": "sandro.labruzzo@isti.cnr.it,michele.artini@isti.cnr.it, claudio.atzori@isti.cnr.it, alessia.bardi@isti.cnr.it", "deploy_repository_url": "http://maven.research-infrastructures.eu/nexus/content/repositories/dnet4-snapshots", "name": "dnet-datasource-manager-service"}
|
|
Also available in: Unified diff
[maven-release-plugin] copy for tag dnet-datasource-manager-service-1.0.4