D-Net

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package eu.dnetlib.xml.database.exist;

import javax.xml.xpath.XPathExpression;

import javax.xml.xpath.XPathExpressionException;

import javax.xml.xpath.XPathFactory;

import org.apache.commons.logging.Log;

import org.apache.commons.logging.LogFactory;

import org.exist.collections.triggers.SAXTrigger;

import org.exist.collections.triggers.TriggerException;

import org.exist.dom.persistent.DocumentImpl;

import org.exist.storage.DBBroker;

import org.exist.storage.txn.Txn;

import org.exist.xmldb.XmldbURI;

/**

 * simple test trigger.

 *

 * @author marko

 *

 */

public class TestExistTrigger extends SAXTrigger {

	/**

	 * logger.

	 */

	private static final Log log = LogFactory.getLog(TestExistTrigger.class); // NOPMD by marko on 11/24/08 5:02 PM

	/**

	 * expression.

	 */

	private transient XPathExpression expr;

	/**

	 * useless.

	 */

	public TestExistTrigger() {

		super();

		try {

			expr = XPathFactory.newInstance().newXPath().compile("//hello");

		} catch (XPathExpressionException e) {

			log.fatal("cannot parse xpath", e);

		}

	}

	@Override

	public void beforeCreateDocument(final DBBroker dbBroker, final Txn txn, final XmldbURI xmldbURI) throws TriggerException {

	}

	@Override

	public void afterCreateDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		try {

			log.debug("created new document: " + expr.evaluate(document));

		} catch (XPathExpressionException e) {

			log.fatal("xpatthing", e);

		}

	}

	@Override

	public void beforeUpdateDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		try {

			log.info("old value: " + expr.evaluate(document));

		} catch (XPathExpressionException e) {

			log.fatal("xpatthing", e);

		}

	}

	@Override

	public void afterUpdateDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		try {

			log.info("new value: " + expr.evaluate(document));

		} catch (XPathExpressionException e) {

			log.fatal("xpatthing", e);

		}

	}

	@Override

	public void beforeUpdateDocumentMetadata(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

	}

	@Override

	public void afterUpdateDocumentMetadata(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

	}

	@Override

	public void beforeCopyDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document, final XmldbURI xmldbURI) throws TriggerException {

	}

	@Override

	public void afterCopyDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document, final XmldbURI xmldbURI) throws TriggerException {

	}

	@Override

	public void beforeMoveDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document, final XmldbURI xmldbURI) throws TriggerException {

	}

	@Override

	public void afterMoveDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document, final XmldbURI xmldbURI) throws TriggerException {

	}

	@Override

	public void beforeDeleteDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		try {

			log.debug("deleted document: " + expr.evaluate(document));

		} catch (XPathExpressionException e) {

			log.fatal("xpatthing", e);

		}

	}

	@Override

	public void afterDeleteDocument(final DBBroker dbBroker, final Txn txn, final XmldbURI xmldbURI) throws TriggerException {

	}

}

package eu.dnetlib.xml.database.exist;

import java.io.IOException;

import java.util.*;

import eu.dnetlib.xml.database.XMLDatabase;

import org.apache.commons.logging.Log;

import org.apache.commons.logging.LogFactory;

import org.junit.After;

import org.junit.Before;

import org.junit.Ignore;

import org.junit.Test;

import org.xmldb.api.base.XMLDBException;

import static org.junit.Assert.*;

/**

 * Test the exist wrapper.

 *

 * @author marko

 *

 */

public class ExistDatabaseTest { // NOPMD by marko on 11/24/08 5:01 PM

	/**

	 * number of values in stress test profile.

	 */

	private static final int STRESS_VALUES = 100;

	/**

	 * number of times the values are repeated in the stress test.

	 */

	private static final int STRESS_PROF_LEN = 100;

	/**

	 * number of profile writes in stress test.

	 */

	private static final int STRESS_TIMES = 2000000;

	/**

	 * number of collections for stress test.

	 */

	private static final int STRESS_COLLS = 40;

	/**

	 * number of profiles in stress test.

	 */

	private static final int STRESS_PROFILES = 1000;

	/**

	 * parallel tuning.

	 */

	private static final int VALUE_SCATTER = 7;

	/**

	 * parallel tuning.

	 */

	private static final int QUERY_SCATTER = 5;

	/**

	 * test trigger name.

	 */

	private static final String TEST_TRIGGER = "testTrigger";

	/**

	 * number of collections for parallel test.

	 */

	private static final int PAR_COLLS = 20;

	/**

	 * iterations per thread.

	 */

	private static final int PAR_ITERATIONS = 100;

	/**

	 * parallel job executions.

	 */

	private static final int PAR_TIMES = 100;

	/**

	 * logger.

	 */

	public static final Log log = LogFactory.getLog(ExistDatabaseTest.class); // NOPMD by marko on 11/24/08 5:01 PM

	/**

	 * test xml string.

	 */

	private static final String HELLO_XML = "<hello/>";

	/**

	 * test xml content.

	 */

	private static final String HELLO_XML_CONTENT = "<hello>content</hello>";

	/**

	 * test file name.

	 */

	private static final String EXAMPLE = "example";

	/**

	 * trigger test file name.

	 */

	private static final String TRIGGER_TEST_FILE = "shouldTrigger";

	/**

	 * root collection prefix.

	 */

	private static final String DB_ROOT = "/db";

	/**

	 * test collection name.

	 */

	private static final String DB_TEST = "/db/testCollection";

	/**

	 * test other collection name.

	 */

	private static final String DB_OTHER = "/db/otherCollection";

	/**

	 * test sub collection.

	 */

	private static final String DB_SUB = DB_TEST + "/sub";

	/**

	 * xml database under test.

	 */

	private transient XMLDatabase database;

	/**

	 * eXist database under test, viewed only in setUp and tearDown.

	 */

	private transient ExistDatabase edb;

	/**

	 * prepares the database.

	 *

	 * @throws Exception

	 *             exist error

	 */

	@Before

	public void setUp() throws Exception {

		edb = new TemporaryExistDatabase();

		edb.start();

		database = edb;

	}

	/**

	 * shuts down the database.

	 *

	 * @throws IOException

	 *             happens

	 */

	@After

	public void tearDown() throws IOException {

		if (edb != null)

			edb.stop();

	}

	/**

	 * test create.

	 *

	 * @throws XMLDBException

	 *             happens

	 */

	@Test

	public void create() throws XMLDBException {

		database.create(EXAMPLE, DB_ROOT, HELLO_XML);

		assertEquals("database resource created", true, true);

	}

	/**

	 * correct behavior is to throw exception on empty file name, because otherwise the file is invisible but the data

	 * is inserted in the xml db.

	 *

	 * @throws XMLDBException

	 *             expected

	 */

	@Test(expected = XMLDBException.class)

	public void createEmptyName() throws XMLDBException {

		database.create("", DB_ROOT, "<shouldnt_exist/>");

		// code to repeat the bug, shouldn't be executed because of the expected exception

		final Iterator<String> res = database.xquery("collection('')/shouldnt_exist");

		assertTrue("shouldn't exist, but it exists",  res.hasNext());

		log.info(database.list(DB_ROOT));

		assertEquals("file should be listed, with empty file name", 1, database.list(DB_ROOT).size());

		assertEquals("file should be listed, with empty file name", "", database.list(DB_ROOT).get(0));

		assertEquals("the file can be retrieved", "<shouldnt_exist/>", database.read("", DB_ROOT));

	}

	/**

	 * test read.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test

	public void read() throws XMLDBException {

		create();

		final String res = database.read(EXAMPLE, DB_ROOT);

		assertEquals("simple reading", HELLO_XML, res);

	}

	/**

	 * test read of non existing file.

	 *

	 * @throws XMLDBException

	 *             shouldn't throw exception

	 */

	@Test

	public void readError() throws XMLDBException {

		final String res = database.read("nonExisting", DB_ROOT);

		assertEquals("expecting null on unexisting", null, res);

	}

	/**

	 * test remove.

	 *

	 * @throws XMLDBException

	 *             shouldn't throw exception

	 */

	@Test

	public void remove() throws XMLDBException {

		database.create(EXAMPLE, DB_ROOT, HELLO_XML);

		String res = database.read(EXAMPLE, DB_ROOT);

		assertEquals("reading", HELLO_XML, res);

		database.remove(EXAMPLE, DB_ROOT);

		res = database.read(EXAMPLE, DB_ROOT);

		assertEquals("now it doesn't exist", null, res);

	}

	/**

	 * delete unexisting file.

	 *

	 * @throws XMLDBException

	 *             could happen

	 */

	@Test

	public void doubleDelete() throws XMLDBException {

		database.create(EXAMPLE, DB_ROOT, HELLO_XML);

		String res = database.read(EXAMPLE, DB_ROOT);

		assertEquals("reading", HELLO_XML, res);

		database.remove(EXAMPLE, DB_ROOT);

		res = database.read(EXAMPLE, DB_ROOT);

		assertEquals("now it doesn't exist", null, res);

		assertFalse("already exists", database.remove(EXAMPLE, DB_ROOT));

	}

	/**

	 * update an xml file.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test

	public void update() throws XMLDBException {

		database.create(EXAMPLE, DB_ROOT, HELLO_XML);

		String res = database.read(EXAMPLE, DB_ROOT);

		assertEquals("reading", HELLO_XML, res);

		database.update(EXAMPLE, DB_ROOT, "<world/>");

		res = database.read(EXAMPLE, DB_ROOT);

		assertEquals("now it doesn't exist", "<world/>", res);

	}

	/**

	 * update an unexisting file.

	 *

	 * @throws XMLDBException

	 *             expected

	 */

	@Test(expected = XMLDBException.class)

	public void updateError() throws XMLDBException {

		database.create(EXAMPLE, DB_ROOT, HELLO_XML);

		database.remove(EXAMPLE, DB_ROOT);

		final String res = database.read(EXAMPLE, DB_ROOT);

		assertEquals("check non existing", null, res);

		database.update(EXAMPLE, DB_ROOT, "<world/>"); // throws

	}

	/**

	 * test xquery.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test()

	public void query() throws XMLDBException {

		database.create(EXAMPLE, DB_ROOT, "<queryTest><one><sub/></one><two/></queryTest>");

		final Iterator<String> res = database.xquery("collection('/db')//queryTest/one");

		assertTrue("finds only one result", res.hasNext());

		final Iterator<String> res2 = database.xquery("collection('/db')//queryTest/two");

		assertTrue("finds only one result",res2.hasNext());

		assertEquals("check the correct result", "<two/>", res2.next());

	}

	/**

	 * create a collection.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test()

	public void createCollection() throws XMLDBException {

		database.createCollection(DB_TEST);

		database.create(EXAMPLE, DB_TEST, "<col/>");

		final String res = database.read(EXAMPLE, DB_TEST);

		assertEquals("check another collection", "<col/>", res);

	}

	/**

	 * check the existence of a collection.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test()

	public void checkCollection() throws XMLDBException {

		createCollection();

		assertTrue("check root", database.collectionExists(DB_ROOT));

		assertTrue("check test collection", database.collectionExists(DB_TEST));

		assertFalse("check non existing", database.collectionExists("/db/testNonExistingCollection"));

	}

	/**

	 * shows that a spurious collection create is legal.

	 *

	 * @throws XMLDBException

	 *             shouldn't throw

	 */

	@Test()

	public void createCollectionDuplicate() throws XMLDBException {

		database.createCollection(DB_TEST);

		database.createCollection(DB_TEST);

	}

	/**

	 * remove a collection.

	 *

	 * @throws XMLDBException

	 *             shouldn't throw

	 */

	@Test()

	public void removeCollection() throws XMLDBException {

		database.createCollection(DB_TEST);

		assertTrue("check before remove", database.collectionExists(DB_TEST));

		database.removeCollection(DB_TEST);

		assertFalse("check after remove", database.collectionExists(DB_TEST));

	}

	/**

	 * check useless contract with spring.

	 */

	@Test

	public void testIsRunning() {

		assertFalse("contract with spring", edb.isRunning());

	}

	/**

	 * Test a scenario where exist fails to create a database.

	 *

	 * @throws IOException

	 *             happens

	 * @throws XMLDBException

	 *             happens

	 */

	@Test(expected = IllegalStateException.class)

	public void checkWrongConfigFile() throws IOException, XMLDBException {

		edb.stop();

		edb = new ExistDatabase();

		try {

			edb.setConfigFile("/tmp/unexistingfile");

			edb.start();

			database = edb;

			create();

		} finally {

			edb = null; // NOPMD - just for junit

		}

	}

	/**

	 * get child collections.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test

	public void testListChildCollections() throws XMLDBException {

		database.createCollection(DB_TEST);

		assertTrue("check that collection exists", database.collectionExists(DB_TEST));

		final String[] expectedNames = new String[] { "child1", "child2", "child3" };

		for (String name : expectedNames)

			database.createCollection(DB_TEST + "/" + name);

		final List<String> res = database.listChildCollections(DB_TEST);

		// the db doesn't return then in the same order

		Collections.sort(res);

		assertArrayEquals("check list", expectedNames, res.toArray());

	}

	/**

	 * check list resources.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test

	public void testList() throws XMLDBException {

		database.createCollection(DB_TEST);

		assertTrue("collection should exist", database.collectionExists(DB_TEST));

		final String[] expectedNames = new String[] { "name1", "name2", "name3" };

		for (String name : expectedNames)

			database.create(name, DB_TEST, HELLO_XML);

		final List<String> res = database.list(DB_TEST);

		// the db doesn't return then in the same order

		Collections.sort(res);

		assertArrayEquals("check list", expectedNames, res.toArray());

	}

	/**

	 * test low-level set trigger.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test

	public void testSetExistTrigger() throws XMLDBException {

		final Map<String, String> params = new HashMap<String, String>();

		params.put("listenerBean", "pippo");

		database.createCollection(DB_TEST);

		edb.setExistTrigger(TestExistTrigger.class, DB_TEST, Arrays.asList(new String[] { "store", "update", "delete" }), params);

		// assertNotNull("check that the conf is stored", database.read(ExistDatabase.COLLECTION_XCONF, DB_ROOT + "/system/config" + DB_TEST));

		database.create(TRIGGER_TEST_FILE, DB_TEST, HELLO_XML_CONTENT);

		assertEquals("check the the write happened", HELLO_XML_CONTENT, database.read(TRIGGER_TEST_FILE, DB_TEST));

		database.update(TRIGGER_TEST_FILE, DB_TEST, "<hello>new content</hello>");

		database.xquery("for $x in collection('')/hello where $x/text() = 'new content' return update value $x/text() with 'xupdate'");

		assertEquals("check the the xupdate happened", "<hello>xupdate</hello>", database.read(TRIGGER_TEST_FILE, DB_TEST));

	}

	/**

	 * Test high level addTrigger.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test

	public void testRegisterTrigger() throws XMLDBException {

		final TestTrigger trigger = new TestTrigger();

		trigger.setName(TEST_TRIGGER);

		database.createCollection(DB_TEST);

		database.registerTrigger(trigger, DB_TEST);

		assertFalse("check that the tester state is correct", trigger.isCreated());

		database.create(TRIGGER_TEST_FILE, DB_TEST, HELLO_XML_CONTENT);

		assertEquals("check the the write happened", HELLO_XML_CONTENT, database.read(TRIGGER_TEST_FILE, DB_TEST));

		assertFalse("check that the trigger is not invoked for the update event", trigger.isUpdated());

		assertFalse("check that the trigger is not invoked for the deletion event", trigger.isDeleted());

		assertTrue("check that the trigger is invoked create", trigger.isCreated());

		assertEquals("check file name for create", TRIGGER_TEST_FILE, trigger.getLastFile());

		assertEquals("check collection name for create", DB_TEST, trigger.getLastCollection());

		trigger.reset();

		assertFalse("check that the tester state is correct", trigger.isUpdated());

		database.update(TRIGGER_TEST_FILE, DB_TEST, "<hello>new content</hello>");

		assertFalse("check that the trigger is not invoked for the creation event", trigger.isCreated());

		assertFalse("check that the trigger is not invoked for the deletion event", trigger.isDeleted());

		assertTrue("check that the trigger is invoked for update", trigger.isUpdated());

		assertEquals("check file name for update", TRIGGER_TEST_FILE, trigger.getLastFile());

		assertEquals("check collection name for update", DB_TEST, trigger.getLastCollection());

		trigger.reset();

		database.xquery("for $x in collection('')/hello where $x/text() = 'new content' return update value $x/text() with 'xupdate'");

		assertTrue("check that the trigger is invoked for xupdate", trigger.isUpdated());

		assertEquals("check file name for xupdate", TRIGGER_TEST_FILE, trigger.getLastFile());

		assertEquals("check collection name for xupdate", DB_TEST, trigger.getLastCollection());

		trigger.reset();

		assertFalse("check that the tester state is correct", trigger.isDeleted());

		database.remove(TRIGGER_TEST_FILE, DB_TEST);

		assertFalse("check that the trigger is not invoked for the creation event", trigger.isCreated());

		assertFalse("check that the trigger is not invoked for the update event", trigger.isUpdated());

		assertNull("check that the file is removed", database.read(TRIGGER_TEST_FILE, DB_TEST));

		assertTrue("check that the trigger is invoked for delete", trigger.isDeleted());

		assertEquals("check file name for delete", TRIGGER_TEST_FILE, trigger.getLastFile());

		assertEquals("check collection name for delete", DB_TEST, trigger.getLastCollection());

	}

	/**

	 * a trigger configuration file should not be listed as a xml file resource.

	 *

	 * @throws XMLDBException

	 *             shouldn't happen

	 */

	@Test

	public void testListWithTriggerConf() throws XMLDBException {

		database.createCollection(DB_TEST);

		assertTrue("collection should exist", database.collectionExists(DB_TEST));

		final TestTrigger trigger = new TestTrigger();

		trigger.setName(TEST_TRIGGER);

		database.registerTrigger(trigger, DB_TEST);

		final String[] expectedNames = new String[] { "name1", "name2", "name3" };

		for (String name : expectedNames)

			database.create(name, DB_TEST, HELLO_XML);

		assertTrue("check that trigger was invoked", trigger.isCreated());

		final List<String> res = database.list(DB_TEST);

		// the db doesn't return then in the same order

		Collections.sort(res);

		assertArrayEquals("check list", expectedNames, res.toArray());

	}

	/**

	 * test trigger with several collections.

	 *

	 * @throws XMLDBException

	 *             shoudn't happen

	 */

	@Test

	public void testTriggerDifferentCollections() throws XMLDBException {

		final TestTrigger trigger = new TestTrigger();

		trigger.setName(TEST_TRIGGER);

		database.createCollection(DB_TEST);

		database.createCollection(DB_OTHER);

		database.createCollection(DB_SUB);

		database.registerTrigger(trigger, DB_TEST);

		database.create(TRIGGER_TEST_FILE, DB_TEST, HELLO_XML);

		assertTrue("trigger was registered for this collection", trigger.isCreated());

		trigger.reset();

		database.create(TRIGGER_TEST_FILE, DB_OTHER, HELLO_XML);

		assertFalse("trigger was not registered for this collection", trigger.isCreated());

		trigger.reset();

		database.registerTrigger(trigger, DB_OTHER);

		database.remove(TRIGGER_TEST_FILE, DB_OTHER);

		assertTrue("trigger is now registered for this collection", trigger.isDeleted());

		trigger.reset();

		database.create(TRIGGER_TEST_FILE, DB_SUB, HELLO_XML);

		assertTrue("trigger is automatically registered for the sub collection", trigger.isCreated());

	}

	/**

	 * fails because eXist wants that all collection paths begin with /db.

	 *

	 * @throws XMLDBException

	 *             expected

	 */

	@Test(expected = XMLDBException.class)

	public void testGetCollection() throws XMLDBException {

		edb.getCollection("/something");

		assertNotNull("dummy", edb);

	}

	/**

	 * simple parallel job.

	 *

	 * @author marko

	 *

	 */

	class SimpleParallelJob extends Thread { // NOPMD

		/**

		 * some argument.

		 */

		private final transient int name;

		/**

		 * record eventual exceptions.

		 */

		private transient Throwable throwable = null;

		/**

		 * pass some argument to the job.

		 *

		 * @param name

		 *            some argument

		 */

		SimpleParallelJob(final int name) {

			super();

			this.name = name;

		}

		/**

		 * {@inheritDoc}

		 *

		 * @see java.lang.Runnable#run()

		 */

		@Override

		public void run() {

			try {

				parallelJob(name);

			} catch (XMLDBException e) {

				log.fatal("parallel job failing", e);

				throwable = e;

			} catch (Throwable e) { // NOPMD

				log.fatal("other exception", e);

				throwable = e;

			}

		}

		public Throwable getThrowable() {

			return throwable;

		}

	}

	/**

	 * stress test the eXist db.

	 *

	 * @throws Throwable

	 *             could

	 */

	@Test

	public void testParallel() throws Throwable {

		final TestTrigger trigger = new TestTrigger();

		trigger.setName(TEST_TRIGGER);

		database.registerTrigger(trigger, DB_ROOT);

		final List<SimpleParallelJob> threads = new ArrayList<SimpleParallelJob>(); // NOPMD

		for (int i = 0; i < PAR_TIMES; i++)

			threads.add(new SimpleParallelJob(i)); // NOPMD

		for (Thread thread : threads) { // NOPMD

			thread.start();

		}

		for (Thread thread : threads) { // NOPMD

			thread.join();

		}

		for (SimpleParallelJob thread : threads) { // NOPMD

			if (thread.getThrowable() != null)

				throw thread.getThrowable();

		}

		assertNotNull("dummy", threads);

	}

	/**

	 * Stress test for eXist WAL logs.

	 *

	 * @throws XMLDBException

	 *             could happen

	 */

	@Test

	@Ignore

	public void testManueleStress() throws XMLDBException {

		final StringBuffer childTemplate = new StringBuffer(200); // NOPMD

		for (int i = 0; i < STRESS_VALUES; i++) {

			childTemplate.append("<key>" + i + "-VAL</key><value>ITER</value>");

		}

		final StringBuffer hugeTemplate = new StringBuffer(200);

		hugeTemplate.append("<root>");

		for (int i = 0; i < STRESS_PROF_LEN; i++) {

			final String child = childTemplate.toString().replace("VAL", Integer.toString(i));

			hugeTemplate.append(child);

		}

		hugeTemplate.append("</root>");

		for (int i = 0; i < STRESS_TIMES; i++) {

			final String huge = hugeTemplate.toString().replace("ITER", Integer.toString(i));

			database.create("stressTest-" + (i % STRESS_PROFILES), DB_ROOT + "/" + (i % STRESS_COLLS), huge);

		}

		assertNotNull("dummy", hugeTemplate);

	}

	/**

	 * one parallel job execution.

	 *

	 * @param arg

	 *            some argument

	 * @throws XMLDBException

	 *             could happen.

	 */

	protected void parallelJob(final int arg) throws XMLDBException {

		final String name = Integer.toString(arg);

		final String coll = DB_ROOT + "/" + Integer.toString(arg % PAR_COLLS);

		database.create(name, coll, "<a" + name + "/>");

		for (int i = 0; i < PAR_ITERATIONS; i++) {

			database.update(name, coll, "<a" + name + " value=\"" + i % VALUE_SCATTER + "\"/>");

			final Iterator<String> res = database.xquery("collection('')//*[@value='" + i % QUERY_SCATTER + "']");

			while (res.hasNext())

				res.next();

		}

	}

}

package eu.dnetlib.xml.database.exist;

import static org.junit.Assert.*;

import java.io.File;

import java.io.FileWriter;

import java.io.IOException;

import org.apache.commons.io.IOUtils;

import org.junit.Before;

import org.junit.Test;

public class PersistentExistDatabaseTest {

	private PersistentExistDatabase db;

	@Before

	public void setUp() throws Exception {

		db = new PersistentExistDatabase();

	}

	@Test

	public void testFile() throws IOException {

		File file = File.createTempFile("test", "conf");

		FileWriter writer = new FileWriter(file);

		try {

			IOUtils.write("test enable-java-binding=\"no\" test", writer);

		} finally {

			writer.close();

		}

		db.enableJava(file, true);

	}

	@Test

	public void testPatch() {

		assertEquals("test123", db.patchConfigFileEnableJava("test123", true));

		assertEquals("enable-java-binding=\"yes\"", db.patchConfigFileEnableJava("enable-java-binding=\"yes\"", true));

		assertEquals("enable-java-binding=\"no\"", db.patchConfigFileEnableJava("enable-java-binding=\"yes\"", false));

		assertEquals("enable-java-binding=\"yes\"", db.patchConfigFileEnableJava("enable-java-binding=\"no\"", true));

		assertEquals("enable-java-binding=\"no\"", db.patchConfigFileEnableJava("enable-java-binding=\"no\"", false));

		assertEquals("yyy enable-java-binding=\"yes\" xxx", db.patchConfigFileEnableJava("yyy enable-java-binding=\"no\" xxx", true));

	}

}

package eu.dnetlib.xml.database.exist;

import org.w3c.dom.Document;

import eu.dnetlib.xml.database.LoggingTrigger;

/**

 * test high level xml db trigger tester.

 *

 * @author marko

 *

 */

public class TestTrigger extends LoggingTrigger {

	/**

	 * true when the trigger is first called on 'create' event.

	 */

	private boolean created = false; // NOPMD

	/**

	 * true when the trigger is first called on 'update' event.

	 */

	private boolean updated = false; // NOPMD

	/**

	 * true when the trigger is first called on 'delete' event.

	 */

	private boolean deleted = false; // NOPMD

	/**

	 * last triggered file name. 

	 */

	private String lastFile;

	/**

	 * last triggered collection name.

	 */

	private String lastCollection;

	/**

	 * {@inheritDoc}

	 * @see eu.dnetlib.xml.database.Trigger#created(java.lang.String, java.lang.String, org.w3c.dom.Document)

	 */

	@Override

	public void created(final String file, final String collection, final Document newDoc) {

		super.created(file, collection, newDoc);

		setLastFile(file);

		setLastCollection(collection);

		created = true;

	}

	/**

	 * {@inheritDoc}

	 * @see eu.dnetlib.xml.database.Trigger#deleted(java.lang.String, java.lang.String, org.w3c.dom.Document)

	 */

	@Override

	public void deleted(final String file, final String collection, final Document oldDoc) {

		super.deleted(file, collection, oldDoc);

		setLastFile(file);

		setLastCollection(collection);

		deleted = true;

	}

	/**

	 * {@inheritDoc}

	 * @see eu.dnetlib.xml.database.Trigger#updated(java.lang.String, java.lang.String, org.w3c.dom.Document, org.w3c.dom.Document)

	 */

	@Override

	public void updated(final String file, final String collection, final Document oldDoc, final Document newDoc) {

		super.updated(file, collection, oldDoc, newDoc);

		setLastFile(file);

		setLastCollection(collection);

		updated = true;

	}

	/**

	 * reset crude sentinels.

	 */

	public void reset() {

		setCreated(false);

		setUpdated(false);

		setDeleted(false);

	}

	public boolean isCreated() {

		return created;

	}

	public void setCreated(final boolean created) {

		this.created = created;

	}

	public boolean isUpdated() {

		return updated;

	}

	public void setUpdated(final boolean updated) {

		this.updated = updated;

	}

	public boolean isDeleted() {

		return deleted;

	}

	public void setDeleted(final boolean deleted) {

		this.deleted = deleted;

	}

	String getLastFile() {

		return lastFile;

	}

	void setLastFile(final String lastFile) {

		this.lastFile = lastFile;

	}

	String getLastCollection() {

		return lastCollection;

	}

	void setLastCollection(final String lastCollection) {

		this.lastCollection = lastCollection;

	}

}

package eu.dnetlib.xml.database.exist;

import static org.junit.Assert.assertNotNull;

import static org.junit.Assert.assertTrue;

import java.io.IOException;

import java.io.StringWriter;

import java.util.Arrays;

import javax.xml.parsers.DocumentBuilder;

import javax.xml.parsers.DocumentBuilderFactory;

import javax.xml.parsers.ParserConfigurationException;

import org.apache.commons.io.IOUtils;

import org.apache.commons.logging.Log;

import org.apache.commons.logging.LogFactory;

import org.junit.Before;

import org.junit.Test;

import org.w3c.dom.Document;

import org.xml.sax.SAXException;

import org.xmldb.api.base.XMLDBException;

/**

 * test exist dom converter.

 *

 * @author marko

 *

 */

public class ExistDOMConverterTest {

	/**

	 * logger.

	 */

	static final Log log = LogFactory.getLog(ExistDOMConverterTest.class); // NOPMD by marko on 11/24/08 5:02 PM

	/**

	 * test collection.

	 */

	private static final String DB_TEST = "/db/collection";

	/**

	 * check that the document is not truncated.

	 */

	private static final int MIN_LENGTH = 80;

	/**

	 * instance under test.

	 */

	private transient ExistDOMConverter converter;

	/**

	 * eXist database instance. 

	 */

	private transient ExistDatabase edb;

	/**

	 * true when the eXist trigger is called.

	 */

	private static boolean triggered;

	/**

	 * setup common stuff.

	 */

	@Before

	public void setUp() {

		converter = new ExistDOMConverter();

		edb = new TemporaryExistDatabase();

		edb.start();

		triggered = false;

	}

	/**

	 * check that the ExistDOMConverter works well with plain DOMs.

	 *

	 * @throws ParserConfigurationException shouldn't happen

	 * @throws SAXException shouldn't happen

	 * @throws IOException shouldn't happen

	 */

	@Test

	public void testAsString() throws ParserConfigurationException, SAXException, IOException {

		final DocumentBuilder builder = DocumentBuilderFactory.newInstance().newDocumentBuilder();

		final Document doc = builder.parse(getClass().getResourceAsStream("userProfileResourceSchema.xsd"));

		assertNotNull("dom", doc);

		assertTrue("length", converter.asString(doc).length() > MIN_LENGTH);

	}

	/**

	 * test without comments in preable.

	 *

	 * @throws XMLDBException shouldn't happen

	 * @throws IOException shouldn't happen

	 */

	@Test

	public void testFromExist() throws XMLDBException, IOException {

		edb.setExistTrigger(DOMConverterTestTrigger.class, DB_TEST, Arrays.asList("store", "update", "delete"), null);

		final StringWriter schema = new StringWriter();

		IOUtils.copy(getClass().getResourceAsStream("userProfileResourceSchemaClean.xsd"), schema);

		edb.create("test", DB_TEST, schema.toString());

		final String res = edb.read("test", DB_TEST);

		assertNotNull("check read", res);

		assertTrue("check that trigger is executed", triggered);

	}

	/**

	 * test comments in preable.

	 *

	 * @throws XMLDBException shouldn't happen

	 * @throws IOException shouldn't happen

	 */

	@Test

	public void testFromExistCommented() throws XMLDBException, IOException {

		edb.setExistTrigger(DOMConverterTestTrigger.class, DB_TEST, Arrays.asList( "store", "update", "delete"), null);

		final StringWriter schema = new StringWriter();

		IOUtils.copy(getClass().getResourceAsStream("userProfileResourceSchema.xsd"), schema);

		edb.create("testCommented", DB_TEST, schema.toString());

		final String res = edb.read("testCommented", DB_TEST);

		assertNotNull("check read", res);

		assertTrue("check that trigger is executed", triggered);

		//assertFalse("check that trigger is executed", triggered);

	}

	public static boolean isTriggered() {

		return triggered;

	}

	public static void setTriggered(final boolean triggered) {

		ExistDOMConverterTest.triggered = triggered;

	}

}

package eu.dnetlib.xml.database.exist;

import org.exist.collections.triggers.SAXTrigger;

import org.exist.collections.triggers.TriggerException;

import org.exist.dom.persistent.DocumentImpl;

import org.exist.storage.DBBroker;

import org.exist.storage.txn.Txn;

import org.exist.xmldb.XmldbURI;

/**

 * helper class for the ExistDOMConverterTest.

 *

 * An instance of this class is instantiated by eXist and all new registered xml documents

 * should trigger the invocation of the triggerCreate method

 *

 * @author marko

 *

 */

public class DOMConverterTestTrigger extends SAXTrigger {

	@Override

	public void beforeCreateDocument(final DBBroker dbBroker, final Txn txn, final XmldbURI xmldbURI) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void afterCreateDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void beforeUpdateDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void afterUpdateDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void beforeUpdateDocumentMetadata(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void afterUpdateDocumentMetadata(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void beforeCopyDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document, final XmldbURI xmldbURI) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void afterCopyDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document, final XmldbURI xmldbURI) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void beforeMoveDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document, final XmldbURI xmldbURI) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void afterMoveDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document, final XmldbURI xmldbURI) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void beforeDeleteDocument(final DBBroker dbBroker, final Txn txn, final DocumentImpl document) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

	@Override

	public void afterDeleteDocument(final DBBroker dbBroker, final Txn txn, final XmldbURI xmldbURI) throws TriggerException {

		ExistDOMConverterTest.setTriggered(true);

	}

}

<?xml version="1.0" encoding="UTF-8"?>

<!-- edited with XMLSpy v2007 sp1 (http://www.altova.com) by pagano (CNR) -->

<!--W3C Schema generated by XMLSpy v2007 sp1 (http://www.altova.com)-->

<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema">

	<xs:element name="RESOURCE_PROFILE">

		<xs:complexType>

			<xs:sequence>

				<xs:element name="HEADER" type="HEADERType" />

				<xs:element name="BODY" type="BODYType" />

			</xs:sequence>

		</xs:complexType>

	</xs:element>

	<xs:complexType name="HEADERType">

		<xs:all>

			<xs:element name="RESOURCE_IDENTIFIER" type="RESOURCE_IDENTIFIERType" />

			<xs:element name="RESOURCE_TYPE" type="RESOURCE_TYPEType" />

			<xs:element name="RESOURCE_KIND" type="RESOURCE_KINDType" />

			<xs:element name="RESOURCE_URI" type="RESOURCE_URIType" />

			<xs:element name="DATE_OF_CREATION" type="DATE_OF_CREATIONType" />

		</xs:all>

	</xs:complexType>

	<xs:complexType name="RESOURCE_IDENTIFIERType">

		<xs:attribute name="value" type="xs:string" use="required" />

	</xs:complexType>

	<xs:complexType name="RESOURCE_TYPEType">

		<xs:attribute name="value" use="required">

			<xs:simpleType>

				<xs:restriction base="xs:string">

					<xs:enumeration value="UserDSResourceType" />

				</xs:restriction>

			</xs:simpleType>

		</xs:attribute>

	</xs:complexType>

	<xs:complexType name="RESOURCE_KINDType">

		<xs:attribute name="value" use="required">

			<xs:simpleType>

				<xs:restriction base="xs:string">

					<xs:enumeration value="UserDSResources" />

					<xs:enumeration value="PendingDSResources"/>

				</xs:restriction>

			</xs:simpleType>

		</xs:attribute>

	</xs:complexType>

	<xs:complexType name="RESOURCE_URIType">

		<xs:attribute name="value" type="xs:string" use="required" />

	</xs:complexType>

	<xs:complexType name="DATE_OF_CREATIONType">

		<xs:attribute name="value" type="xs:string" use="required" />

	</xs:complexType>

	<xs:complexType name="BODYType">

		<xs:sequence>

			<xs:element name="CONFIGURATION" type="CONFIGURATIONType" />

			<xs:element name="STATUS" type="xs:string" />

			<xs:element name="SECURITY_PARAMETERS"

				type="SECURITY_PARAMETERSType" />

		</xs:sequence>

	</xs:complexType>

	<xs:complexType name="CONFIGURATIONType">

		<xs:sequence>

			<xs:element name="PERSONAL_INFO" type="PERSONAL_INFOType" />

			<xs:element name="COMMUNITIES" type="COMMUNITIESType" />

			<xs:element name="LAYOUT" type="LAYOUTType" />

			<xs:element name="SAVED_QUERIES" type="SAVED_QUERYType" minOccurs="0" maxOccurs="unbounded" />

			<xs:element name="RECOMMENDATION" type="RECOMMENDATIONType" />

		</xs:sequence>

	</xs:complexType>

	<xs:complexType name="SECURITY_PARAMETERSType">

		<xs:all>

			<xs:element name="SECURITY_PARAMETER" type="xs:string" />

		</xs:all>

	</xs:complexType>

	<xs:complexType name="SAVED_QUERYType">

       <xs:sequence>

           <xs:element name="query" type="QUERYType" />

           <xs:element name="hashValue" type="xs:string" minOccurs="0"

               maxOccurs="unbounded" />

           <xs:element name="alertOnChange" type="xs:boolean" />

       </xs:sequence>

   </xs:complexType>

   <xs:complexType name="QUERYType">

	   <xs:sequence>

			<xs:element name="CQL">

				<xs:complexType>

					<xs:attribute name="value" type="xs:string" />

				</xs:complexType>

			</xs:element>

			<xs:element name="COMMUNITYID" minOccurs="0" maxOccurs="unbounded">

				<xs:complexType>

					<xs:attribute name="communityId" type="xs:string"  />

				</xs:complexType>

			</xs:element>

			<xs:element name="COLLECTIONID" minOccurs="0" maxOccurs="unbounded">

				<xs:complexType>

					<xs:attribute name="collectionId" type="xs:string"  />

				</xs:complexType>

			</xs:element>

		</xs:sequence>

   </xs:complexType>

	<xs:complexType name="PERSONAL_INFOType">

		<xs:sequence>

			<xs:element name="FIRST_NAME">

				<xs:complexType>

					<xs:attribute name="value" type="xs:string" />