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package eu.dnetlib.repo.manager.server.services;
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stefania.m
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import com.fasterxml.jackson.databind.ObjectMapper;
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import eu.dnetlib.domain.data.PiwikInfo;
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import eu.dnetlib.domain.data.Repository;
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import eu.dnetlib.domain.data.RepositoryInterface;
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import eu.dnetlib.domain.enabling.Vocabulary;
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import eu.dnetlib.domain.functionality.UserProfile;
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import eu.dnetlib.gwt.server.service.SpringGwtRemoteServiceServlet;
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import eu.dnetlib.repo.manager.client.services.RepositoryService;
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import eu.dnetlib.repo.manager.server.utils.EmailUtils;
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import eu.dnetlib.repo.manager.server.utils.LocalVocabularies;
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import eu.dnetlib.repo.manager.service.controllers.RepositoryApi;
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import eu.dnetlib.repo.manager.shared.*;
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import eu.dnetlib.repos.RepoApi;
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import gr.uoa.di.driver.enabling.vocabulary.VocabularyLoader;
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import org.apache.commons.codec.digest.DigestUtils;
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import org.apache.commons.lang.StringEscapeUtils;
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import org.apache.commons.lang.WordUtils;
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import org.apache.log4j.Logger;
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import org.json.JSONException;
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import org.springframework.beans.factory.annotation.Autowired;
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import org.springframework.beans.factory.annotation.Value;
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import org.springframework.core.ParameterizedTypeReference;
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import org.springframework.dao.EmptyResultDataAccessException;
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import org.springframework.http.HttpMethod;
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import org.springframework.http.ResponseEntity;
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import org.springframework.http.converter.json.MappingJackson2HttpMessageConverter;
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import org.springframework.scheduling.annotation.Scheduled;
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import org.springframework.stereotype.Service;
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import org.springframework.web.client.RestClientException;
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import org.springframework.web.client.RestTemplate;
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import org.springframework.web.util.UriComponentsBuilder;
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import javax.annotation.PostConstruct;
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import java.io.IOException;
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import java.io.UnsupportedEncodingException;
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import java.net.URLEncoder;
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import java.util.*;
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import java.util.concurrent.ConcurrentHashMap;
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import java.net.URL;
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/**
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* Created by nikonas on 12/8/15.
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*/
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@SuppressWarnings("serial")
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@Service("repositoryService")
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public class RepositoryServiceImpl extends SpringGwtRemoteServiceServlet implements RepositoryService {
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private static final Logger LOGGER = Logger
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.getLogger(RepositoryServiceImpl.class);
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@Autowired
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private RepoApi repoAPI;
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@Autowired
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private EmailUtils emailUtils;
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private final String[] vocabularyNames = {"dnet:countries", "dnet:datasource_typologies", "dnet:compatibilityLevel"};
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@Autowired
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private VocabularyLoader vocabularyLoader;
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private Map<String, Vocabulary> vocabularyMap = new ConcurrentHashMap<String, Vocabulary>();
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@Value("${services.repo-manager.repository.testing.mode}")
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private boolean testingMode;
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@Autowired
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private PiwikDAO piwikDAO;
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@Value("${services.repomanager.analyticsURL}")
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private String analyticsURL;
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@Value("${services.repomanager.usageStatisticsDiagramsBaseURL}")
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private String usageStatisticsDiagramsBaseURL;
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@Value("${services.repomanager.usageStatisticsNumbersBaseURL}")
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private String usageStatisticsNumbersBaseURL;
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private static final String PIWIK_SCRIPT = StringEscapeUtils.escapeHtml("<!-- Piwik -->\n" +
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"<script type=\"text/javascript\">\n" +
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"\tvar _paq = _paq || [];\n" +
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"\t_paq.push(['enableLinkTracking']);\n" +
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"\t(function() {\n" +
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"\t\tvar u=\"//analytics.openaire.eu/\";\n" +
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"\t\t_paq.push(['setTrackerUrl', u+'piwik.php']);\n" +
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"\t\t_paq.push(['setSiteId', $$$]);\n" +
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"\t\t<% if(handle != null){%>\n" +
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"\t\t\t_paq.push(['setCustomVariable', 1, 'oaipmhID',\"oai:<%= baseUrl %>:<%=handle %>\", 'page']);\n" +
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"\t\t\t_paq.push(['trackPageView']);\n" +
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"\t\t<}>\n" +
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"\t\tvar d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];\n" +
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"\t\tg.type='text/javascript'; g.async=true; g.defer=true; g.src=u+'piwik.js'; s.parentNode.insertBefore(g,s);\n" +
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"\t})();\n" +
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"</script>\n" +
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"<noscript>\n" +
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"\t<p>\n" +
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"\t\t<img src=\"//analytics.openaire.eu/piwik.php?idsite=47\" style=\"border:0;\" alt=\"\" />\n" +
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"\t</p>\n" +
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"</noscript>\n" +
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"<!— End Piwik Code —>");
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@Autowired
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private RepositoryApi repositoryApi;
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@PostConstruct
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public void init() {
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this.loadVocabularies();
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}
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@Override
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public Tuple<List<Repository>, List<Repository>> getRepositoriesByCountry(String country, String mode, boolean includeUnknownCountries) throws RepositoryServiceException {
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try {
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if (testingMode)
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return this.getRepositoriesByCountryTesting(country, mode, includeUnknownCountries);
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LOGGER.debug("Getting repositories of country: " + country + " with type: " + mode + " and includeUnknownCountries: " + includeUnknownCountries);
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Tuple<List<Repository>, List<Repository>> retTuple = new Tuple<List<Repository>, List<Repository>>();
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// List<Repository> reposList = this.repoAPI.getRepositoriesPerCountry(mode).get(country);
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Boolean managed = null;
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List<Repository> reposList = repositoryApi.getRepositoriesByCountry(country,mode,managed);
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if (reposList == null) {
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retTuple.setFirst(new ArrayList<Repository>());
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// if (!includeUnknownCountries) {
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// throw new RepositoryServiceException("registration.noReposForThisCountry", RepositoryServiceException.ErrorCode.NO_REPOS_FOR_THIS_COUNTRY);
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// }
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} else {
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retTuple.setFirst(reposList);
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}
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if (includeUnknownCountries) {
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List<Repository> withoutCountryList = this.repoAPI.getRepositoriesPerCountry(mode).get("Without Country");
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List<Repository> unknownCountryList = this.repoAPI.getRepositoriesPerCountry(mode).get("UNKNOWN");
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List<Repository> totalList = new ArrayList<Repository>();
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if (withoutCountryList != null)
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totalList.addAll(withoutCountryList);
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if (unknownCountryList != null)
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totalList.addAll(unknownCountryList);
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retTuple.setSecond(totalList);
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}
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return retTuple;
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} catch (Exception e) {
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LOGGER.error("Error while getting repositories of country: " + country + " with type: " + mode + " and includeUnknownCountries: " + includeUnknownCountries, e);
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if (e instanceof RepositoryServiceException) {
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throw (RepositoryServiceException) e;
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} else {
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emailUtils.reportException(e);
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throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
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}
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}
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}
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@Override
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public List<Repository> getRepositoriesByCountry(String country, String mode) throws RepositoryServiceException {
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return this.getRepositoriesByCountry(country, mode, false).getFirst();
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}
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@Override
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public DatasourcesCollection getRepositoriesOfUser(String userEmail, boolean includeShared, boolean includeByOthers) throws RepositoryServiceException {
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DatasourcesCollection retDatasources = new DatasourcesCollection();
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try {
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LOGGER.debug("Getting repositories of user: " + userEmail + " . IncludeShared: "
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+ includeShared + " . IncludeByOthers: " + includeByOthers);
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int page = 0;
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String size = "50";
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List<Repository> resultSet = repositoryApi.getRepositoriesOfUser(userEmail,String.valueOf(page),size);
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while(resultSet.size() > 0 ){
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| 176 |
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retDatasources.getDatasourcesOfUser().addAll(resultSet);
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page++;
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resultSet = repositoryApi.getRepositoriesOfUser(userEmail,String.valueOf(page),size);
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}
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/*
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| 182 |
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if (includeShared) {
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//TODO create dao to save-get shared datasourcesIDs
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List<String> sharedDatasourceIds = new ArrayList<String>();
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| 185 |
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retDatasources.setSharedDatasources(this.repoAPI.getReposByIds(sharedDatasourceIds));
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//geting Piwik Info
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for(Repository repository: retDatasources.getSharedDatasources())
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| 188 |
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repository.setPiwikInfo(this.getPiwikSiteForRepository(repository.getId()));
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}
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if (includeByOthers) {
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| 192 |
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retDatasources.setDatasourcesOfOthers(this.repoAPI.getRepositoriesOfUser(userEmail, true));
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| 193 |
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//geting Piwik Info
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| 194 |
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for(Repository repository: retDatasources.getDatasourcesOfOthers())
|
| 195 |
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repository.setPiwikInfo(this.getPiwikSiteForRepository(repository.getId()));
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| 196 |
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}
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| 197 |
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*/
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| 198 |
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} catch (JSONException e) {
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| 199 |
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LOGGER.error("Error while getting repositories of user: " + userEmail + " . IncludeShared: " + includeShared + " . IncludeByOthers: " + includeByOthers, e);
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| 200 |
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emailUtils.reportException(e);
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| 201 |
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throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
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| 202 |
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}
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| 203 |
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return retDatasources;
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}
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| 205 |
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| 206 |
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@Override
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| 207 |
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public List<String> getRepositoryUrlsOfUser(String userEmail, boolean includeShared, boolean includeByOthers) throws RepositoryServiceException {
|
| 208 |
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try {
|
| 209 |
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LOGGER.debug("Getting repositories(urls) of user: " + userEmail + " . IncludeShared: " + includeShared + " . IncludeByOthers: " + includeByOthers);
|
| 210 |
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List<String> retRepos = new ArrayList<String>();
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| 211 |
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| 212 |
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int page = 0;
|
| 213 |
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String size = "50";
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| 214 |
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List<String> resultSet = repositoryApi.getUrlsOfUserRepos(userEmail,String.valueOf(page),size);
|
| 215 |
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while(resultSet.size() > 0 ){
|
| 216 |
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retRepos.addAll(resultSet);
|
| 217 |
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page++;
|
| 218 |
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resultSet = repositoryApi.getUrlsOfUserRepos(userEmail,String.valueOf(page),size);
|
| 219 |
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}
|
| 220 |
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return retRepos;
|
| 221 |
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|
|
| 222 |
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} catch (Exception e) {
|
| 223 |
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LOGGER.error("Error while getting repositories(urls) of user: " + userEmail + " . IncludeShared: " + includeShared + " . IncludeByOthers: " + includeByOthers, e);
|
| 224 |
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emailUtils.reportException(e);
|
| 225 |
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throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 226 |
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}
|
| 227 |
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}
|
| 228 |
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|
| 229 |
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|
@Override
|
| 230 |
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public Repository getRepository(String repoId) throws RepositoryServiceException {
|
| 231 |
|
|
try {
|
| 232 |
|
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LOGGER.debug("Getting repository with id: " + repoId);
|
| 233 |
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Repository repo = repositoryApi.getRepositoryById(repoId);
|
| 234 |
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|
| 235 |
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if (repo != null) {
|
| 236 |
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for (RepositoryInterface iFace : repo.getInterfaces()) {
|
| 237 |
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if (!iFace.getContentDescription().equals("file::hybrid") && iFace.getAccessProtocol().equalsIgnoreCase("oai")) {
|
| 238 |
|
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iFace.setComplianceName(getComplianceName(iFace.getCompliance()));
|
| 239 |
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if (iFace.getCompliance().equals("notCompatible"))
|
| 240 |
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iFace.setComplianceName("not compatible");
|
| 241 |
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}
|
| 242 |
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}
|
| 243 |
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| 244 |
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//geting Piwik Info
|
| 245 |
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repo.setPiwikInfo(this.getPiwikSiteForRepository(repoId));
|
| 246 |
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|
| 247 |
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} else
|
| 248 |
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throw new RepositoryServiceException("registration.repositoryNotExists", RepositoryServiceException.ErrorCode.REPOSITORY_NOT_EXISTS);
|
| 249 |
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|
return repo;
|
| 250 |
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|
|
| 251 |
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} catch (Exception e) {
|
| 252 |
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LOGGER.error("Error while getting repository with id: " + repoId, e);
|
| 253 |
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if (e instanceof RepositoryServiceException) {
|
| 254 |
|
|
throw (RepositoryServiceException) e;
|
| 255 |
|
|
} else {
|
| 256 |
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emailUtils.reportException(e);
|
| 257 |
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throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 258 |
|
|
}
|
| 259 |
|
|
}
|
| 260 |
|
|
}
|
| 261 |
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|
| 262 |
|
|
@Override
|
| 263 |
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|
nikon.gasp
|
public Map<String, String> getCountries(Boolean existingOnly, String mode) throws RepositoryServiceException {
|
| 264 |
40516
|
nikon.gasp
|
try {
|
| 265 |
|
|
LOGGER.debug("Getting countries");
|
| 266 |
|
|
List<String> countries = new ArrayList<String>();
|
| 267 |
40543
|
nikon.gasp
|
|
| 268 |
|
|
Map<String, String> countriesMap = new TreeMap<String, String>();
|
| 269 |
|
|
|
| 270 |
40516
|
nikon.gasp
|
if (existingOnly) {
|
| 271 |
|
|
LOGGER.debug("using the repositories map");
|
| 272 |
|
|
countries.addAll(this.repoAPI.getRepositoriesByCountry(mode).keySet());
|
| 273 |
|
|
} else {
|
| 274 |
|
|
LOGGER.debug("using \"dnet:countries\" vocabulary");
|
| 275 |
40861
|
nikon.gasp
|
countries.addAll(this.getVocabulary("dnet:countries").getEnglishNames());
|
| 276 |
40516
|
nikon.gasp
|
}
|
| 277 |
49879
|
antonis.le
|
// countries.addAll(repositoryApi.getDnetCountries());
|
| 278 |
40543
|
nikon.gasp
|
for (String country : countries) {
|
| 279 |
|
|
countriesMap.put(country, WordUtils.capitalizeFully(country));
|
| 280 |
|
|
}
|
| 281 |
|
|
|
| 282 |
|
|
return countriesMap;
|
| 283 |
|
|
|
| 284 |
40516
|
nikon.gasp
|
} catch (Exception e) {
|
| 285 |
40546
|
nikon.gasp
|
LOGGER.error("Error while getting getting countries", e);
|
| 286 |
40516
|
nikon.gasp
|
if (e instanceof RepositoryServiceException) {
|
| 287 |
|
|
throw (RepositoryServiceException) e;
|
| 288 |
|
|
} else {
|
| 289 |
40543
|
nikon.gasp
|
emailUtils.reportException(e);
|
| 290 |
40516
|
nikon.gasp
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 291 |
|
|
}
|
| 292 |
|
|
}
|
| 293 |
|
|
}
|
| 294 |
|
|
|
| 295 |
|
|
@Override
|
| 296 |
40543
|
nikon.gasp
|
public Map<String, String> getCountries() throws RepositoryServiceException {
|
| 297 |
41049
|
nikon.gasp
|
return this.getCountries(false, null);
|
| 298 |
40516
|
nikon.gasp
|
}
|
| 299 |
|
|
|
| 300 |
|
|
@Override
|
| 301 |
40552
|
nikon.gasp
|
public List<Timezone> getTimezones() throws RepositoryServiceException {
|
| 302 |
|
|
try {
|
| 303 |
|
|
LOGGER.debug("Getting timezones from file");
|
| 304 |
49879
|
antonis.le
|
// return repositoryApi.getTimezones();
|
| 305 |
41049
|
nikon.gasp
|
return LocalVocabularies.timezones;
|
| 306 |
40552
|
nikon.gasp
|
} catch (Exception e) {
|
| 307 |
|
|
LOGGER.error("Error while getting timezones from file", e);
|
| 308 |
|
|
emailUtils.reportException(e);
|
| 309 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 310 |
|
|
}
|
| 311 |
|
|
|
| 312 |
|
|
}
|
| 313 |
|
|
|
| 314 |
|
|
@Override
|
| 315 |
|
|
public List<String> getTypologies() throws RepositoryServiceException {
|
| 316 |
|
|
try {
|
| 317 |
|
|
LOGGER.debug("Getting typologies from file");
|
| 318 |
49879
|
antonis.le
|
// return repositoryApi.getTypologies();
|
| 319 |
41049
|
nikon.gasp
|
return LocalVocabularies.typologies;
|
| 320 |
|
|
} catch (Exception e) {
|
| 321 |
40552
|
nikon.gasp
|
LOGGER.error("Error while getting typologies from file", e);
|
| 322 |
|
|
emailUtils.reportException(e);
|
| 323 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 324 |
|
|
}
|
| 325 |
|
|
}
|
| 326 |
|
|
|
| 327 |
|
|
@Override
|
| 328 |
40593
|
nikon.gasp
|
public Map<String, String> getDatasourceClasses(String mode) throws RepositoryServiceException {
|
| 329 |
49879
|
antonis.le
|
return repositoryApi.getDatasourceClasses(mode);
|
| 330 |
40575
|
nikon.gasp
|
}
|
| 331 |
|
|
|
| 332 |
|
|
@Override
|
| 333 |
40611
|
nikon.gasp
|
public Map<String, String> getCompatibilityClasses(String mode) throws RepositoryServiceException {
|
| 334 |
49879
|
antonis.le
|
return repositoryApi.getCompatibilityClasses(mode);
|
| 335 |
40611
|
nikon.gasp
|
}
|
| 336 |
|
|
|
| 337 |
|
|
@Override
|
| 338 |
40336
|
nikon.gasp
|
public void storeRepository(Repository repo, String mode) throws RepositoryServiceException {
|
| 339 |
|
|
|
| 340 |
40575
|
nikon.gasp
|
try {
|
| 341 |
50252
|
panagiotis
|
/* LOGGER.debug("Storing repository with name: " + repo.getOfficialName());
|
| 342 |
50001
|
antonis.le
|
//List<RepositoryInterface> interfacesToRegister = new ArrayList<RepositoryInterface>();
|
| 343 |
|
|
JSONObject params = new JSONObject();
|
| 344 |
|
|
params.put("datatype", mode);
|
| 345 |
|
|
ObjectMapper mapper = new ObjectMapper();
|
| 346 |
|
|
String json_repo = mapper.writerWithDefaultPrettyPrinter().writeValueAsString(repo);
|
| 347 |
50252
|
panagiotis
|
params.put("repository", json_repo);*/
|
| 348 |
|
|
|
| 349 |
|
|
|
| 350 |
|
|
//repositoryApi.addRepository(params.toString());
|
| 351 |
|
|
repositoryApi.addRepository(mode,repo);
|
| 352 |
50001
|
antonis.le
|
LOGGER.debug("Repository with name: " + repo.getOfficialName() + " stored!");
|
| 353 |
41133
|
nikon.gasp
|
|
| 354 |
50001
|
antonis.le
|
}catch (Exception e) {
|
| 355 |
|
|
emailUtils.reportException(e);
|
| 356 |
|
|
LOGGER.error("Error while storing repository with name: " + repo.getOfficialName(), e);
|
| 357 |
|
|
throw new RepositoryServiceException("Error while storing repository", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 358 |
40575
|
nikon.gasp
|
}
|
| 359 |
40336
|
nikon.gasp
|
}
|
| 360 |
40546
|
nikon.gasp
|
|
| 361 |
40575
|
nikon.gasp
|
@Override
|
| 362 |
|
|
public void updateRepositoryInformation(Repository repo) throws RepositoryServiceException {
|
| 363 |
|
|
try {
|
| 364 |
|
|
LOGGER.debug("Updating information of repo: " + repo.getOfficialName());
|
| 365 |
40548
|
nikon.gasp
|
|
| 366 |
49879
|
antonis.le
|
//TODO SOS, check old API
|
| 367 |
|
|
|
| 368 |
|
|
//this.repoAPI.updateRepositoryInformation(repo);
|
| 369 |
|
|
repositoryApi.updateEnglishName(repo.getId(),repo.getEnglishName());
|
| 370 |
|
|
repositoryApi.updateLatitude(repo.getId(), String.valueOf(repo.getLatitude()));
|
| 371 |
|
|
repositoryApi.updateLongitude(repo.getId(), String.valueOf(repo.getLongitude()));
|
| 372 |
|
|
repositoryApi.updateOfficialName(repo.getId(),repo.getOfficialName());
|
| 373 |
50001
|
antonis.le
|
repositoryApi.updateLogoUrl(repo.getId(),repo.getLogoUrl());
|
| 374 |
|
|
repositoryApi.updateTimezone(repo.getId(),String.valueOf(repo.getTimezone()));
|
| 375 |
|
|
repositoryApi.updatePlatform(repo.getId(),repo.getTypology());
|
| 376 |
|
|
|
| 377 |
40575
|
nikon.gasp
|
} catch (Exception e) {
|
| 378 |
|
|
LOGGER.error("Error while updating information of repo: " + repo.getOfficialName(), e);
|
| 379 |
|
|
if (e instanceof RepositoryServiceException) {
|
| 380 |
|
|
throw (RepositoryServiceException) e;
|
| 381 |
|
|
} else {
|
| 382 |
|
|
emailUtils.reportException(e);
|
| 383 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 384 |
|
|
}
|
| 385 |
|
|
}
|
| 386 |
|
|
}
|
| 387 |
|
|
|
| 388 |
40579
|
nikon.gasp
|
@Override
|
| 389 |
41079
|
nikon.gasp
|
public RepositoryInterface updateInterface(RepositoryInterface iFace, String repoId, String datatype) throws RepositoryServiceException {
|
| 390 |
41049
|
nikon.gasp
|
try {
|
| 391 |
|
|
LOGGER.debug("updating interface with id: " + iFace.getId());
|
| 392 |
41089
|
nikon.gasp
|
RepositoryInterface retIface = null;
|
| 393 |
|
|
retIface = this.repoAPI.updateRepositoryInterfaceWithoutChecks(repoId, iFace, datatype);
|
| 394 |
|
|
retIface.setComplianceName(this.getComplianceName(retIface.getCompliance()));
|
| 395 |
41005
|
nikon.gasp
|
|
| 396 |
41089
|
nikon.gasp
|
return retIface;
|
| 397 |
41049
|
nikon.gasp
|
} catch (Exception e) {
|
| 398 |
|
|
LOGGER.error("error updating interface with id: " + iFace.getId(), e);
|
| 399 |
|
|
if (e instanceof RepositoryServiceException) {
|
| 400 |
|
|
throw (RepositoryServiceException) e;
|
| 401 |
|
|
} else {
|
| 402 |
|
|
emailUtils.reportException(e);
|
| 403 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 404 |
|
|
}
|
| 405 |
|
|
}
|
| 406 |
41005
|
nikon.gasp
|
}
|
| 407 |
|
|
|
| 408 |
|
|
@Override
|
| 409 |
41079
|
nikon.gasp
|
public RepositoryInterface insertInterface(RepositoryInterface iFace, String repoId, String datatype) throws RepositoryServiceException {
|
| 410 |
41049
|
nikon.gasp
|
try {
|
| 411 |
|
|
LOGGER.debug("inserting interface with id: " + iFace.getId());
|
| 412 |
41089
|
nikon.gasp
|
RepositoryInterface retIface = null;
|
| 413 |
49879
|
antonis.le
|
//retIface = this.repoAPI.insertRepositoryInterfaceWithoutChecks(repoId, iFace, datatype);
|
| 414 |
|
|
|
| 415 |
50252
|
panagiotis
|
/* JSONObject params = new JSONObject();
|
| 416 |
50001
|
antonis.le
|
params.put("datatype",datatype);
|
| 417 |
|
|
params.put("repoId",repoId);
|
| 418 |
50252
|
panagiotis
|
params.put("iFace",iFace);*/
|
| 419 |
|
|
//retIface = repositoryApi.addRepositoryInterface(params.toString());
|
| 420 |
|
|
|
| 421 |
|
|
retIface = repositoryApi.addRepositoryInterface(datatype,repoId,iFace);
|
| 422 |
41089
|
nikon.gasp
|
retIface.setComplianceName(this.getComplianceName(retIface.getCompliance()));
|
| 423 |
|
|
return retIface;
|
| 424 |
41049
|
nikon.gasp
|
|
| 425 |
|
|
} catch (Exception e) {
|
| 426 |
|
|
LOGGER.error("error updating interface with id: " + iFace.getId(), e);
|
| 427 |
|
|
if (e instanceof RepositoryServiceException) {
|
| 428 |
|
|
throw (RepositoryServiceException) e;
|
| 429 |
|
|
} else {
|
| 430 |
|
|
emailUtils.reportException(e);
|
| 431 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 432 |
|
|
}
|
| 433 |
|
|
}
|
| 434 |
|
|
}
|
| 435 |
|
|
|
| 436 |
|
|
@Override
|
| 437 |
41087
|
nikon.gasp
|
public void deleteInterface(String repoId, RepositoryInterface iFace, String datatype) throws RepositoryServiceException {
|
| 438 |
41049
|
nikon.gasp
|
List<RepositoryInterface> iFaces = new ArrayList<RepositoryInterface>();
|
| 439 |
|
|
iFaces.add(iFace);
|
| 440 |
41087
|
nikon.gasp
|
this.deleteInterfaces(repoId, iFaces, datatype);
|
| 441 |
41049
|
nikon.gasp
|
}
|
| 442 |
|
|
|
| 443 |
|
|
@Override
|
| 444 |
41087
|
nikon.gasp
|
public void deleteInterfaces(String repoId, List<RepositoryInterface> iFaces, String datatype) throws RepositoryServiceException {
|
| 445 |
41005
|
nikon.gasp
|
try {
|
| 446 |
|
|
LOGGER.debug("deleting interfaces of repo: " + repoId);
|
| 447 |
49879
|
antonis.le
|
//this.repoAPI.deleteRepositoryInterfacesWithoutChecks(repoId, iFaces, datatype);
|
| 448 |
41005
|
nikon.gasp
|
|
| 449 |
49879
|
antonis.le
|
for(RepositoryInterface iFace : iFaces) {
|
| 450 |
|
|
LOGGER.info("deleting repository interface with url/set/id: " + iFace.getBaseUrl() + "/"
|
| 451 |
|
|
+ iFace.getAccessSet() + "/" + iFace.getId());
|
| 452 |
|
|
repositoryApi.deleteRepositoryInterface(iFace.getId());
|
| 453 |
|
|
}
|
| 454 |
|
|
|
| 455 |
41005
|
nikon.gasp
|
} catch (Exception e) {
|
| 456 |
|
|
LOGGER.error("deleting interfaces of repo: " + repoId, e);
|
| 457 |
|
|
if (e instanceof RepositoryServiceException) {
|
| 458 |
|
|
throw (RepositoryServiceException) e;
|
| 459 |
|
|
} else {
|
| 460 |
|
|
emailUtils.reportException(e);
|
| 461 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 462 |
|
|
}
|
| 463 |
|
|
}
|
| 464 |
|
|
|
| 465 |
|
|
}
|
| 466 |
|
|
|
| 467 |
|
|
@Override
|
| 468 |
40580
|
nikon.gasp
|
public DatasourceVocabularies getDatasourceVocabularies(String mode) throws RepositoryServiceException {
|
| 469 |
40579
|
nikon.gasp
|
try {
|
| 470 |
|
|
LOGGER.debug("Getting vocabularies for datasource with type: " + mode);
|
| 471 |
40580
|
nikon.gasp
|
DatasourceVocabularies vocs = new DatasourceVocabularies();
|
| 472 |
40579
|
nikon.gasp
|
vocs.setCountries(this.getCountries());
|
| 473 |
|
|
vocs.setDatasourceClasses(this.getDatasourceClasses(mode));
|
| 474 |
|
|
vocs.setTimezones(this.getTimezones());
|
| 475 |
|
|
vocs.setTypologies(this.getTypologies());
|
| 476 |
40827
|
nikon.gasp
|
vocs.setCompatibilityLevels(this.getCompatibilityClasses(mode));
|
| 477 |
40579
|
nikon.gasp
|
|
| 478 |
|
|
return vocs;
|
| 479 |
|
|
|
| 480 |
|
|
} catch (Exception e) {
|
| 481 |
|
|
LOGGER.error("Error while getting vocabularies for datasource with type: \" + mode", e);
|
| 482 |
|
|
emailUtils.reportException(e);
|
| 483 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 484 |
|
|
}
|
| 485 |
|
|
}
|
| 486 |
|
|
|
| 487 |
40548
|
nikon.gasp
|
private Tuple<List<Repository>, List<Repository>> getRepositoriesByCountryTesting(String country, String mode, boolean includeUnknownCountries) throws RepositoryServiceException {
|
| 488 |
|
|
try {
|
| 489 |
|
|
LOGGER.debug("Getting testing repositories of country: " + country + " with type: " + mode + " and includeUnknownCountries: " + includeUnknownCountries);
|
| 490 |
|
|
|
| 491 |
|
|
Tuple<List<Repository>, List<Repository>> retTuple = new Tuple<List<Repository>, List<Repository>>();
|
| 492 |
|
|
List<Repository> reposList = new ArrayList<Repository>();
|
| 493 |
|
|
reposList.add(this.repoAPI.getRepository("opendoar____::1356"));
|
| 494 |
|
|
reposList.add(this.repoAPI.getRepository("opendoar____::2678"));
|
| 495 |
|
|
reposList.add(this.repoAPI.getRepository("opendoar____::2980"));
|
| 496 |
|
|
reposList.add(this.repoAPI.getRepository("opendoar____::1347"));
|
| 497 |
40698
|
stefania.m
|
reposList.add(this.repoAPI.getRepository("opendoar____::2984"));
|
| 498 |
40548
|
nikon.gasp
|
|
| 499 |
|
|
retTuple.setFirst(reposList);
|
| 500 |
|
|
|
| 501 |
41049
|
nikon.gasp
|
if (includeUnknownCountries) {
|
| 502 |
40548
|
nikon.gasp
|
List<Repository> totalList = new ArrayList<Repository>();
|
| 503 |
|
|
totalList.add(this.repoAPI.getRepository("opendoar____::3000"));
|
| 504 |
|
|
totalList.add(this.repoAPI.getRepository("opendoar____::1027"));
|
| 505 |
|
|
totalList.add(this.repoAPI.getRepository("opendoar____::1096"));
|
| 506 |
|
|
|
| 507 |
|
|
retTuple.setSecond(totalList);
|
| 508 |
|
|
}
|
| 509 |
|
|
|
| 510 |
|
|
return retTuple;
|
| 511 |
|
|
|
| 512 |
|
|
} catch (Exception e) {
|
| 513 |
41049
|
nikon.gasp
|
LOGGER.error("Error while getting testing repositories of country: " + country + " with type: " + mode + " and includeUnknownCountries: " + includeUnknownCountries, e);
|
| 514 |
40548
|
nikon.gasp
|
if (e instanceof RepositoryServiceException) {
|
| 515 |
|
|
throw (RepositoryServiceException) e;
|
| 516 |
|
|
} else {
|
| 517 |
|
|
emailUtils.reportException(e);
|
| 518 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 519 |
|
|
}
|
| 520 |
|
|
}
|
| 521 |
|
|
}
|
| 522 |
|
|
|
| 523 |
41638
|
nikon.gasp
|
@Override
|
| 524 |
|
|
public String getLatestUpdateDateOfList(String mode) throws RepositoryServiceException {
|
| 525 |
|
|
try {
|
| 526 |
|
|
LOGGER.debug("Getting latest update date of list: " + mode);
|
| 527 |
|
|
return this.repoAPI.getListLatestUpdate(mode).split("T")[0];
|
| 528 |
|
|
|
| 529 |
|
|
} catch (Exception e) {
|
| 530 |
|
|
LOGGER.error("Error while getting latest update date of list: " + mode, e);
|
| 531 |
|
|
emailUtils.reportException(e);
|
| 532 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 533 |
|
|
}
|
| 534 |
|
|
}
|
| 535 |
|
|
|
| 536 |
45462
|
stefania.m
|
@Override
|
| 537 |
|
|
public PiwikInfo getPiwikSiteForRepository(String repoId) throws RepositoryServiceException {
|
| 538 |
|
|
try {
|
| 539 |
49879
|
antonis.le
|
LOGGER.debug("Repo id -> " + repoId);
|
| 540 |
45462
|
stefania.m
|
return this.piwikDAO.getPiwikSiteForRepo(repoId);
|
| 541 |
|
|
} catch (EmptyResultDataAccessException e) {
|
| 542 |
|
|
return null;
|
| 543 |
|
|
}
|
| 544 |
|
|
}
|
| 545 |
|
|
|
| 546 |
|
|
@Override
|
| 547 |
49691
|
antonis.le
|
public void enableMetricsForRepository(Repository repository, UserProfile requestor) throws RepositoryServiceException {
|
| 548 |
49860
|
stefania.m
|
|
| 549 |
|
|
try {
|
| 550 |
|
|
String URL = analyticsURL + "siteName=" + URLEncoder.encode(repository.getOfficialName(), "UTF-8") + "&url=" + URLEncoder.encode(repository.getWebsiteUrl(), "UTF-8");
|
| 551 |
|
|
Map<String, Object> map = new ObjectMapper().readValue(new URL(URL), Map.class);
|
| 552 |
45462
|
stefania.m
|
|
| 553 |
49860
|
stefania.m
|
String siteId = null;
|
| 554 |
|
|
if(map.get("value")!=null) {
|
| 555 |
|
|
siteId = map.get("value").toString();
|
| 556 |
|
|
}
|
| 557 |
45462
|
stefania.m
|
|
| 558 |
49855
|
stefania.m
|
String authenticationToken = "32846584f571be9b57488bf4088f30ea";
|
| 559 |
49691
|
antonis.le
|
|
| 560 |
46279
|
stefania.m
|
PiwikInfo piwikInfo = new PiwikInfo();
|
| 561 |
|
|
piwikInfo.setRepositoryId(repository.getId());
|
| 562 |
49691
|
antonis.le
|
piwikInfo.setRepositoryName(repository.getOfficialName());
|
| 563 |
|
|
piwikInfo.setCountry(repository.getCountryName());
|
| 564 |
46279
|
stefania.m
|
piwikInfo.setSiteId(siteId);
|
| 565 |
49691
|
antonis.le
|
piwikInfo.setAuthenticationToken(authenticationToken);
|
| 566 |
|
|
piwikInfo.setRequestorEmail(requestor.getEmail());
|
| 567 |
|
|
piwikInfo.setRequestorName(requestor.getFirstname() + " " + requestor.getLastname());
|
| 568 |
49855
|
stefania.m
|
piwikInfo.setValidated(false);
|
| 569 |
45462
|
stefania.m
|
|
| 570 |
46279
|
stefania.m
|
this.piwikDAO.savePiwikInfo(piwikInfo);
|
| 571 |
|
|
|
| 572 |
49855
|
stefania.m
|
emailUtils.sendAdministratorRequestToEnableMetrics(piwikInfo);
|
| 573 |
|
|
emailUtils.sendUserRequestToEnableMetrics(piwikInfo);
|
| 574 |
49691
|
antonis.le
|
|
| 575 |
49860
|
stefania.m
|
} catch (UnsupportedEncodingException uee) {
|
| 576 |
|
|
LOGGER.error("Error while creating piwikScript URL", uee);
|
| 577 |
|
|
emailUtils.reportException(uee);
|
| 578 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 579 |
49855
|
stefania.m
|
} catch (IOException ioe) {
|
| 580 |
|
|
LOGGER.error("Error while creating piwik site", ioe);
|
| 581 |
|
|
emailUtils.reportException(ioe);
|
| 582 |
|
|
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 583 |
|
|
} catch (Exception e) {
|
| 584 |
|
|
LOGGER.error("Error while sending email to administrator or user about the request to enable metrics", e);
|
| 585 |
|
|
emailUtils.reportException(e);
|
| 586 |
|
|
}
|
| 587 |
45462
|
stefania.m
|
}
|
| 588 |
|
|
|
| 589 |
|
|
@Override
|
| 590 |
|
|
public String getPiwikScriptForRepository(String repoId) throws RepositoryServiceException {
|
| 591 |
|
|
try {
|
| 592 |
|
|
PiwikInfo piwikInfo = this.piwikDAO.getPiwikSiteForRepo(repoId);
|
| 593 |
|
|
|
| 594 |
|
|
String piwikScript = PIWIK_SCRIPT.replace("$$$", piwikInfo.getSiteId());
|
| 595 |
|
|
return piwikScript;
|
| 596 |
|
|
|
| 597 |
|
|
} catch (EmptyResultDataAccessException e) {
|
| 598 |
|
|
return null;
|
| 599 |
|
|
}
|
| 600 |
|
|
}
|
| 601 |
|
|
|
| 602 |
49691
|
antonis.le
|
@Override
|
| 603 |
|
|
public List<PiwikInfo> getPiwikSitesForRepositories() throws RepositoryServiceException {
|
| 604 |
|
|
try {
|
| 605 |
|
|
|
| 606 |
|
|
List<PiwikInfo> piwikInfos = new ArrayList<>();
|
| 607 |
|
|
piwikInfos = this.piwikDAO.getPiwikSitesForRepos();
|
| 608 |
|
|
|
| 609 |
|
|
return piwikInfos;
|
| 610 |
|
|
|
| 611 |
|
|
} catch (EmptyResultDataAccessException e) {
|
| 612 |
|
|
LOGGER.error("Error while getting list of piwik sites: ", e);
|
| 613 |
|
|
emailUtils.reportException(e);
|
| 614 |
|
|
throw new RepositoryServiceException("General error", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 615 |
|
|
}
|
| 616 |
|
|
}
|
| 617 |
|
|
|
| 618 |
|
|
@Override
|
| 619 |
49855
|
stefania.m
|
public void markPiwikSiteAsValidated(String repositoryId) throws RepositoryServiceException {
|
| 620 |
49691
|
antonis.le
|
try {
|
| 621 |
49855
|
stefania.m
|
this.piwikDAO.markPiwikSiteAsValidated(repositoryId);
|
| 622 |
49691
|
antonis.le
|
|
| 623 |
49855
|
stefania.m
|
PiwikInfo piwikInfo = this.piwikDAO.getPiwikSiteForRepo(repositoryId);
|
| 624 |
|
|
emailUtils.sendAdministratorMetricsEnabled(piwikInfo);
|
| 625 |
|
|
emailUtils.sendUserMetricsEnabled(piwikInfo);
|
| 626 |
49691
|
antonis.le
|
|
| 627 |
|
|
} catch (EmptyResultDataAccessException e) {
|
| 628 |
|
|
LOGGER.error("Error while approving piwik site: ", e);
|
| 629 |
|
|
emailUtils.reportException(e);
|
| 630 |
|
|
throw new RepositoryServiceException("General error", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 631 |
49855
|
stefania.m
|
} catch (Exception e) {
|
| 632 |
|
|
LOGGER.error("Error while sending email to administrator or user about the enabling of metrics", e);
|
| 633 |
|
|
emailUtils.reportException(e);
|
| 634 |
49691
|
antonis.le
|
}
|
| 635 |
|
|
}
|
| 636 |
|
|
|
| 637 |
49855
|
stefania.m
|
@Override
|
| 638 |
|
|
public MetricsInfo getMetricsInfoForRepository(String repoId) throws RepositoryServiceException {
|
| 639 |
|
|
try {
|
| 640 |
|
|
|
| 641 |
|
|
MetricsInfo metricsInfo = new MetricsInfo();
|
| 642 |
|
|
metricsInfo.setDiagramsBaseURL(this.usageStatisticsDiagramsBaseURL);
|
| 643 |
|
|
metricsInfo.setMetricsNumbers(getMetricsNumbers(getOpenAIREId(repoId)));
|
| 644 |
|
|
return metricsInfo;
|
| 645 |
|
|
|
| 646 |
|
|
} catch (Exception e) {
|
| 647 |
|
|
LOGGER.error("Error while getting metrics info for repository: ", e);
|
| 648 |
|
|
emailUtils.reportException(e);
|
| 649 |
|
|
throw new RepositoryServiceException("General error", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
|
| 650 |
|
|
}
|
| 651 |
|
|
}
|
| 652 |
|
|
|
| 653 |
|
|
private MetricsNumbers getMetricsNumbers(String openAIREID) throws BrokerException {
|
| 654 |
|
|
|
| 655 |
|
|
//build the uri params
|
| 656 |
|
|
UriComponentsBuilder builder = UriComponentsBuilder.fromHttpUrl(this.usageStatisticsNumbersBaseURL + openAIREID + "/clicks");
|
| 657 |
|
|
|
| 658 |
|
|
//create new template engine
|
| 659 |
|
|
RestTemplate template = new RestTemplate();
|
| 660 |
|
|
template.getMessageConverters().add(new MappingJackson2HttpMessageConverter());
|
| 661 |
|
|
ResponseEntity<MetricsNumbers> resp;
|
| 662 |
|
|
try {
|
| 663 |
|
|
//communicate with endpoint
|
| 664 |
|
|
resp = template.exchange(
|
| 665 |
|
|
builder.build().encode().toUri(),
|
| 666 |
|
|
HttpMethod.GET,
|
| 667 |
|
|
null,
|
| 668 |
|
|
new ParameterizedTypeReference<MetricsNumbers>() {
|
| 669 |
|
|
});
|
| 670 |
|
|
} catch (RestClientException e) {
|
| 671 |
|
|
throw e;
|
| 672 |
|
|
}
|
| 673 |
|
|
|
| 674 |
|
|
return resp.getBody();
|
| 675 |
|
|
}
|
| 676 |
|
|
|
| 677 |
40575
|
nikon.gasp
|
private String getCountryCode(String countryName) {
|
| 678 |
40861
|
nikon.gasp
|
Vocabulary countries = this.getVocabulary("dnet:countries");
|
| 679 |
40575
|
nikon.gasp
|
|
| 680 |
|
|
return countries.getEncoding(countryName);
|
| 681 |
|
|
}
|
| 682 |
|
|
|
| 683 |
|
|
private String getDatasourceClassCode(String datasourceClassName) {
|
| 684 |
40861
|
nikon.gasp
|
Vocabulary datasourceClasses = this.getVocabulary("dnet:datasource_typologies");
|
| 685 |
40575
|
nikon.gasp
|
|
| 686 |
|
|
return datasourceClasses.getEncoding(datasourceClassName);
|
| 687 |
|
|
}
|
| 688 |
|
|
|
| 689 |
40834
|
nikon.gasp
|
private String getComplianceName(String complianceCode) {
|
| 690 |
40861
|
nikon.gasp
|
Vocabulary compatibilityLevels = this.getVocabulary("dnet:compatibilityLevel");
|
| 691 |
40834
|
nikon.gasp
|
|
| 692 |
|
|
return compatibilityLevels.getEnglishName(complianceCode);
|
| 693 |
|
|
}
|
| 694 |
|
|
|
| 695 |
40861
|
nikon.gasp
|
private Vocabulary getVocabulary(String vocName) {
|
| 696 |
|
|
|
| 697 |
|
|
if (!vocabularyMap.containsKey(vocName)) {
|
| 698 |
41049
|
nikon.gasp
|
vocabularyMap.put(vocName, vocabularyLoader.getVocabulary(vocName, Locale.ENGLISH, Locale.ROOT));
|
| 699 |
40861
|
nikon.gasp
|
}
|
| 700 |
|
|
return vocabularyMap.get(vocName);
|
| 701 |
|
|
}
|
| 702 |
|
|
|
| 703 |
41049
|
nikon.gasp
|
@Scheduled(fixedRate = 3600000)
|
| 704 |
40861
|
nikon.gasp
|
private void loadVocabularies() {
|
| 705 |
|
|
LOGGER.debug("loading vocabularies");
|
| 706 |
|
|
for (String vocName : vocabularyNames) {
|
| 707 |
41049
|
nikon.gasp
|
vocabularyMap.put(vocName, vocabularyLoader.getVocabulary(vocName, Locale.ENGLISH, Locale.ROOT));
|
| 708 |
40861
|
nikon.gasp
|
}
|
| 709 |
|
|
}
|
| 710 |
|
|
|
| 711 |
49855
|
stefania.m
|
private String getOpenAIREId(String repoId) {
|
| 712 |
|
|
|
| 713 |
|
|
if (repoId != null && repoId.contains("::")) {
|
| 714 |
|
|
return repoId.split("::")[0] + "::" + DigestUtils.md5Hex(repoId.split("::")[1]);
|
| 715 |
|
|
}
|
| 716 |
|
|
|
| 717 |
|
|
return null;
|
| 718 |
|
|
}
|
| 719 |
51030
|
panagiotis
|
|
| 720 |
|
|
@Override
|
| 721 |
|
|
public Aggregations getRepositoryAggregations(String repoId) throws Exception {
|
| 722 |
|
|
return repositoryApi.getRepositoryAggregations(repoId);
|
| 723 |
|
|
}
|
| 724 |
50001
|
antonis.le
|
}
|