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package eu.dnetlib.validator.service.impls.listeners;
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import java.util.ArrayList;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import javax.xml.xpath.XPath;
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import javax.xml.xpath.XPathConstants;
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import javax.xml.xpath.XPathExpressionException;
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import javax.xml.xpath.XPathFactory;
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import org.apache.log4j.Logger;
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import org.springframework.transaction.annotation.Propagation;
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import org.springframework.transaction.annotation.Transactional;
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import org.w3c.dom.Node;
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import org.w3c.dom.NodeList;
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import eu.dnetlib.domain.functionality.validator.Rule;
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import eu.dnetlib.validator.commons.dao.DaoException;
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import eu.dnetlib.validator.commons.dao.jobs.JobsDAO;
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import eu.dnetlib.validator.commons.dao.rules.RuleStatus;
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import eu.dnetlib.validator.commons.dao.rules.RulesDAO;
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import eu.dnetlib.validator.commons.dao.tasks.TaskStored;
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import eu.dnetlib.validator.commons.dao.tasks.TasksDAO;
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import eu.dnetlib.validator.engine.ValidatorException;
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import eu.dnetlib.validator.engine.execution.CompletedTask;
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import eu.dnetlib.validator.engine.execution.JobListener;
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/**
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*
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* @author Nikon Gasparis
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*
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*/
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public class ValidatorJobListener implements JobListener {
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private static Logger logger = Logger.getLogger(ValidatorJobListener.class);
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private Integer jobSubmittedId;
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private String jobSubmittedUser;
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private TasksDAO tasksDao;
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private JobsDAO jobsDao;
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private RulesDAO rulesDao;
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private String validationType;
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private Set<Integer> blacklistRuleIds;
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private int objsValidated = 0;
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private int score = 0;
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private int internalJobsFinished = 0;
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private int internalJobsSum = 1;
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Map<String,Map<Integer,RuleStatus>> scoreMapPerGroupBy = new HashMap<String,Map<Integer,RuleStatus>>();
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private String valBaseUrl = null;
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private Map<Integer, Rule> ruleCacheMap = new HashMap<Integer, Rule>();
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private String groupBy_xpath = null;
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@Override
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@Transactional(propagation = Propagation.REQUIRED)
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public synchronized void currentResults(List<CompletedTask> tasks, int jobId, Object record, Map<String,Object> recordContext, Throwable t) throws ValidatorException {
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try {
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logger.error("Completed tasks for " + jobId + " (exception). Error: " + t.getMessage());
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List<TaskStored> tasksStored = new ArrayList<TaskStored>();
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List<String> groupBy_values = this.parseGroupByValues(record,groupBy_xpath);
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for (CompletedTask ctask : tasks) {
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TaskStored taskStored = new TaskStored();
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taskStored.setEnded(ctask.finished.toString());
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taskStored.setStarted(ctask.started.toString());
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taskStored.setJobId(jobSubmittedId);
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taskStored.setRecordIdentifier(ctask.valobjId);
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taskStored.setRuleId(ctask.ruleId);
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taskStored.setSuccess(ctask.success);
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taskStored.setStatus("finished");
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tasksStored.add(taskStored);
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logger.debug("JOBID:"+jobSubmittedId+"# Task-failed: rule " + ctask.ruleId + " on " + ctask.valobjId + " with success " + ctask.success+
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" ruleId: "+taskStored.getRuleId() + " error:"+ t.getMessage());
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}
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this.updateScoreMap(groupBy_values, tasksStored);
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if (objsValidated % 100 == 0)
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jobsDao.setStatus(jobSubmittedId, "ongoing", objsValidated, validationType);
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objsValidated++;
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} catch (Exception e) {
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logger.error("Error while proccessing results");
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throw new ValidatorException("Error while proccessing results", e);
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}
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}
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@Override
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@Transactional(propagation = Propagation.REQUIRED)
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public synchronized void currentResults(List<CompletedTask> tasks, int jobId, Object record, Map<String,Object> recordContext) throws ValidatorException {
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try {
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List<Map<String, String>> veloList = new ArrayList<Map<String, String>>();
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logger.debug("JOBID:"+jobSubmittedId+"# Updating Completed Tasks");
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Map<Integer,Boolean> ruleIdsSuccess = new HashMap<Integer,Boolean>();
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Map<String, String> veloMap = null;
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List<TaskStored> tasksStored = new ArrayList<TaskStored>();
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List<String> groupBy_values = this.parseGroupByValues(record,groupBy_xpath);
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int recordScore = -1;
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for (CompletedTask ctask : tasks) {
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veloMap = new HashMap<String, String>();
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TaskStored taskStored = new TaskStored();
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taskStored.setEnded(ctask.finished.toString());
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taskStored.setStarted(ctask.started.toString());
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taskStored.setJobId(jobSubmittedId);
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taskStored.setRecordIdentifier(ctask.valobjId);
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taskStored.setRuleId(ctask.ruleId);
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taskStored.setSuccess(ctask.success);
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taskStored.setStatus("finished");
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tasksStored.add(taskStored);
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// logger.debug("JOBID:"+jobSubmittedId+"# Task: rule " + ctask.ruleId + " on " + ctask.valobjId + " with success " + ctask.success+
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// " ruleId: "+taskStored.getRuleId());
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ruleIdsSuccess.put(taskStored.getRuleId(),ctask.success);
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// logger.debug("inserted on map: "+ "id: " + taskStored.getRuleId());
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if (!ctask.success) {
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veloMap.put("id", Integer.toString(taskStored.getRuleId()));
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veloMap.put("error", "...");
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veloList.add(veloMap);
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// if (scoreTriggerRules.contains(ctask.ruleId)) {
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// recordScore=0;
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// }
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Rule rule = this.getRule(taskStored.getRuleId());
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String xpath = null;
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veloMap.put("name", rule.getName());
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if (! rule.getType().contains("Chain"))
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xpath = rule.getConfiguration().getProperty("xpath");
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else {
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xpath = this.getRule(Integer.parseInt(rule.getConfiguration().getProperty("rule_2"))).getConfiguration().getProperty("xpath");
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}
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veloMap.put("xpath", xpath);
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veloMap.put("mandatory", Boolean.toString(rule.isMandatory()));
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}
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}
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this.updateScoreMap(groupBy_values, tasksStored);
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// WORKFLOWS BEGIN
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int recordBlacklistScore = -1;
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if (recordScore == -1) {
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recordScore = this.calculateRecordScore(ruleIdsSuccess);
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if (blacklistRuleIds != null )
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recordBlacklistScore = this.calculateBlacklistRecordScore(ruleIdsSuccess, blacklistRuleIds);
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}
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Map<String,String> recordValidationResult = new HashMap<String,String>();
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recordValidationResult.put("score", Integer.toString(score));
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recordValidationResult.put("id", tasks.get(0).valobjId);
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if (score > 0)
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recordValidationResult.put("status", "pass");
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else
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recordValidationResult.put("status", "fail");
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recordContext.put("veloList", (List<Map<String, String>>) veloList);
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recordContext.put("recordValidationResult", (Map<String,String>) recordValidationResult);
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recordContext.put("score", (int) score);
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recordContext.put("recordBlacklistScore", (int) recordBlacklistScore);
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// WORKFLOWS END
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if (objsValidated % 100 == 0)
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jobsDao.setStatus(jobSubmittedId, "ongoing", objsValidated, validationType);
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objsValidated++;
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} catch (Exception e) {
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logger.error("Error while proccessing results");
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throw new ValidatorException("Error while proccessing results", e);
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}
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}
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@Override
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@Transactional(propagation = Propagation.REQUIRED)
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public synchronized void finished(int jobId, Map<String,Object> jobContext) {
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try {
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internalJobsFinished++;
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if(internalJobsFinished == internalJobsSum) {
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logger.debug("JOBID:"+ this.jobSubmittedId +"# Set job finished");
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jobContext.put("jobSubmittedId", (int) jobSubmittedId);
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jobContext.put("jobSubmittedUser", (String) jobSubmittedUser);
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score = jobsDao.setJobFinished(jobSubmittedId, this.scoreMapPerGroupBy, null, false, objsValidated, validationType);
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logger.debug("score_"+validationType +": " + score);
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jobContext.put("score_"+validationType, (int) score);
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tasksDao.saveTasks(this.scoreMapPerGroupBy.get("all"));
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if (jobSubmittedUser.contains("Workflow")) {
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jobsDao.setTotalJobFinished(jobId, null, false);
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}
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} else {
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| 192 |
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logger.debug("JOBID:"+jobSubmittedId+"#Job finished. Waiting "+ (internalJobsSum-internalJobsFinished) + " job(s) to finish" );
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}
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} catch (Exception e) {
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logger.error("Error while finalizing successfull job");
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}
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}
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| 198 |
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| 199 |
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@Override
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| 200 |
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@Transactional(propagation = Propagation.REQUIRED)
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| 201 |
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public synchronized void failed(int jobId, Map<String,Object> jobContext, Throwable t) {
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| 202 |
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try {
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| 203 |
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internalJobsFinished++;
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| 204 |
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if(internalJobsFinished == internalJobsSum) {
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| 205 |
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logger.debug("JOBID:"+jobSubmittedId+"# Set job finished-failed");
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| 206 |
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jobContext.put("jobSubmittedId", (int) jobSubmittedId);
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| 207 |
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jobContext.put("jobSubmittedUser",(String) jobSubmittedUser);
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| 208 |
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score = jobsDao.setJobFinished(jobSubmittedId, this.scoreMapPerGroupBy,t.getMessage(), true, objsValidated, validationType);
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| 209 |
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jobContext.put("score_"+validationType, (int) 0);
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| 210 |
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| 211 |
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if (jobSubmittedUser.contains("Workflow")) {
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| 212 |
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jobsDao.setTotalJobFinished(jobId, t.getMessage(), true);
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| 213 |
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}
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| 214 |
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} else {
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| 215 |
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logger.debug("JOBID:"+jobSubmittedId+"#Job finished. Waiting "+ (internalJobsSum-internalJobsFinished) + " job(s) to finish" );
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}
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} catch (Exception e) {
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| 218 |
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logger.error("Error while finalizing failed job");
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| 219 |
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}
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| 220 |
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}
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| 221 |
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| 222 |
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private synchronized void updateScoreMap(List<String> groupBy_values, List<TaskStored> tasksStored) throws Exception {
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| 223 |
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for (String groupBy : groupBy_values) {
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| 224 |
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logger.debug("updating map for groupBy value: " + groupBy);
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Map<Integer,RuleStatus> scoreMapPerRule = null;
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if((scoreMapPerRule=this.scoreMapPerGroupBy.get(groupBy)) == null) {
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| 227 |
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logger.debug("map for groupBy value: " + groupBy + " doesn't exist");
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| 228 |
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scoreMapPerRule = new HashMap<Integer, RuleStatus>();
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} else {
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| 230 |
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logger.debug("map for groupBy value: " + groupBy + " exists");
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| 231 |
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}
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| 232 |
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for (TaskStored task : tasksStored) {
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| 233 |
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RuleStatus ruleSt = null;
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| 234 |
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if((ruleSt=scoreMapPerRule.get(task.getRuleId())) == null) {
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| 235 |
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logger.debug("ruleStatus for rule with id : " + task.getRuleId() + " doesn't exist");
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| 236 |
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ruleSt = new RuleStatus();
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| 237 |
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}
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| 238 |
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Rule rule = null;
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| 239 |
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if((rule=ruleCacheMap.get(task.getRuleId())) == null) {
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| 240 |
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rule = rulesDao.get(task.getRuleId());
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| 241 |
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ruleCacheMap.put(task.getRuleId(), rule);
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| 242 |
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}
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| 243 |
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ruleSt.setMandatory(rule.isMandatory());
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| 244 |
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ruleSt.setWeight(rule.getWeight());
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| 245 |
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ruleSt.total++;
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| 246 |
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if (task.getSuccess())
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| 247 |
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ruleSt.success++;
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| 248 |
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else {
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| 249 |
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if (groupBy.equals("all") && ruleSt.getFailedTasks().size() < 10 )
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| 250 |
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ruleSt.getFailedTasks().add(task);
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| 251 |
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}
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| 252 |
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scoreMapPerRule.put(task.getRuleId(), ruleSt);
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| 253 |
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}
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| 254 |
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this.scoreMapPerGroupBy.put(groupBy, scoreMapPerRule);
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| 255 |
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}
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| 256 |
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}
|
| 257 |
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| 258 |
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private int calculateRecordScore(Map<Integer,Boolean> ruleIdsSuccess) throws Exception {
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| 259 |
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float score = 0;
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| 260 |
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float sum = 0;
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| 261 |
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float weights = 0 ;
|
| 262 |
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for (Map.Entry<Integer,Boolean> entry : ruleIdsSuccess.entrySet()) {
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| 263 |
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Rule rule = ruleCacheMap.get(entry.getKey());
|
| 264 |
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if (rule.isMandatory()) {
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| 265 |
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weights += rule.getWeight();
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| 266 |
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if (entry.getValue()) {
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| 267 |
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sum += rule.getWeight();
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| 268 |
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}
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| 269 |
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}
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| 270 |
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score = (sum/weights)*100;
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| 271 |
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| 272 |
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}
|
| 273 |
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return (int) score;
|
| 274 |
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|
}
|
| 275 |
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|
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|
|
| 276 |
|
|
private int calculateBlacklistRecordScore(Map<Integer,Boolean> ruleIdsSuccess, Set<Integer> blacklistRuleIds) throws Exception {
|
| 277 |
|
|
float score = 0;
|
| 278 |
|
|
float sum = 0;
|
| 279 |
|
|
float weights = 0 ;
|
| 280 |
|
|
for (Map.Entry<Integer,Boolean> entry : ruleIdsSuccess.entrySet()) {
|
| 281 |
|
|
Rule rule = ruleCacheMap.get(entry.getKey());
|
| 282 |
|
|
if (rule.isMandatory() && blacklistRuleIds.contains(entry.getKey())) {
|
| 283 |
|
|
weights += rule.getWeight();
|
| 284 |
|
|
if (entry.getValue()) {
|
| 285 |
|
|
sum += rule.getWeight();
|
| 286 |
|
|
}
|
| 287 |
|
|
}
|
| 288 |
|
|
score = (sum/weights)*100;
|
| 289 |
|
|
}
|
| 290 |
|
|
return (int) score;
|
| 291 |
|
|
}
|
| 292 |
19683
|
nikon.gasp
|
|
| 293 |
31326
|
nikon.gasp
|
private synchronized List<String> parseGroupByValues(Object record, String xpath) {
|
| 294 |
18311
|
nikon.gasp
|
List<String> groupBy_values = null;
|
| 295 |
|
|
logger.debug("groupBy field: "+xpath);
|
| 296 |
18252
|
nikon.gasp
|
try{
|
| 297 |
|
|
XPathFactory factory = XPathFactory.newInstance();
|
| 298 |
|
|
XPath xPath = factory.newXPath();
|
| 299 |
18311
|
nikon.gasp
|
NodeList rtl = (NodeList) xPath.evaluate(xpath+"/text()",record ,XPathConstants.NODESET);
|
| 300 |
18315
|
nikon.gasp
|
groupBy_values = new ArrayList<String>();
|
| 301 |
18252
|
nikon.gasp
|
if (rtl.getLength() > 0) {
|
| 302 |
18315
|
nikon.gasp
|
for(int i=0; i<rtl.getLength(); i++) {
|
| 303 |
18252
|
nikon.gasp
|
Node childNode = rtl.item(i);
|
| 304 |
18311
|
nikon.gasp
|
groupBy_values.add(childNode.getNodeValue());
|
| 305 |
|
|
logger.debug("value: "+childNode.getNodeValue());
|
| 306 |
18252
|
nikon.gasp
|
}
|
| 307 |
31252
|
nikon.gasp
|
groupBy_values.add("all");
|
| 308 |
18315
|
nikon.gasp
|
} else {
|
| 309 |
|
|
groupBy_values.add("all");
|
| 310 |
18252
|
nikon.gasp
|
}
|
| 311 |
18315
|
nikon.gasp
|
|
| 312 |
18252
|
nikon.gasp
|
} catch (XPathExpressionException e) {
|
| 313 |
|
|
logger.error("error getting object"+ e);
|
| 314 |
|
|
}
|
| 315 |
18311
|
nikon.gasp
|
return groupBy_values;
|
| 316 |
18252
|
nikon.gasp
|
}
|
| 317 |
18398
|
nikon.gasp
|
|
| 318 |
37040
|
nikon.gasp
|
private Rule getRule(int id) throws DaoException {
|
| 319 |
35734
|
nikon.gasp
|
Rule rule = null;
|
| 320 |
|
|
if((rule=ruleCacheMap.get(id)) == null) {
|
| 321 |
|
|
rule = rulesDao.get(id);
|
| 322 |
|
|
ruleCacheMap.put(id, rule);
|
| 323 |
|
|
}
|
| 324 |
|
|
return rule;
|
| 325 |
|
|
|
| 326 |
|
|
}
|
| 327 |
17710
|
nikon.gasp
|
public Integer getJobSubmittedId() {
|
| 328 |
|
|
return jobSubmittedId;
|
| 329 |
|
|
}
|
| 330 |
17673
|
nikon.gasp
|
|
| 331 |
17710
|
nikon.gasp
|
public void setJobSubmittedId(Integer jobSubmittedId) {
|
| 332 |
|
|
this.jobSubmittedId = jobSubmittedId;
|
| 333 |
17673
|
nikon.gasp
|
}
|
| 334 |
|
|
|
| 335 |
18398
|
nikon.gasp
|
public String getJobSubmittedUser() {
|
| 336 |
|
|
return jobSubmittedUser;
|
| 337 |
|
|
}
|
| 338 |
|
|
|
| 339 |
|
|
public void setJobSubmittedUser(String jobSubmittedUser) {
|
| 340 |
|
|
this.jobSubmittedUser = jobSubmittedUser;
|
| 341 |
|
|
}
|
| 342 |
|
|
|
| 343 |
34342
|
nikon.gasp
|
public String getGroupBy_xpath() {
|
| 344 |
|
|
return groupBy_xpath;
|
| 345 |
17710
|
nikon.gasp
|
}
|
| 346 |
17673
|
nikon.gasp
|
|
| 347 |
34342
|
nikon.gasp
|
public void setGroupBy_xpath(String groupBy_xpath) {
|
| 348 |
|
|
this.groupBy_xpath = groupBy_xpath;
|
| 349 |
17673
|
nikon.gasp
|
}
|
| 350 |
|
|
|
| 351 |
34342
|
nikon.gasp
|
public String getValBaseUrl() {
|
| 352 |
|
|
return valBaseUrl;
|
| 353 |
17710
|
nikon.gasp
|
}
|
| 354 |
17673
|
nikon.gasp
|
|
| 355 |
34342
|
nikon.gasp
|
public void setValBaseUrl(String valBaseUrl) {
|
| 356 |
|
|
this.valBaseUrl = valBaseUrl;
|
| 357 |
17673
|
nikon.gasp
|
}
|
| 358 |
|
|
|
| 359 |
34342
|
nikon.gasp
|
public int getInternalJobsSum() {
|
| 360 |
|
|
return internalJobsSum;
|
| 361 |
17875
|
nikon.gasp
|
}
|
| 362 |
|
|
|
| 363 |
34342
|
nikon.gasp
|
public void setInternalJobsSum(int internalJobsSum) {
|
| 364 |
|
|
this.internalJobsSum = internalJobsSum;
|
| 365 |
17875
|
nikon.gasp
|
}
|
| 366 |
|
|
|
| 367 |
34342
|
nikon.gasp
|
|
| 368 |
|
|
public Map<String, Map<Integer, RuleStatus>> getScoreMapPerGroupBy() {
|
| 369 |
|
|
return scoreMapPerGroupBy;
|
| 370 |
17673
|
nikon.gasp
|
}
|
| 371 |
|
|
|
| 372 |
34342
|
nikon.gasp
|
public void setScoreMapPerGroupBy(
|
| 373 |
|
|
Map<String, Map<Integer, RuleStatus>> scoreMapPerGroupBy) {
|
| 374 |
|
|
this.scoreMapPerGroupBy = scoreMapPerGroupBy;
|
| 375 |
17673
|
nikon.gasp
|
}
|
| 376 |
18311
|
nikon.gasp
|
|
| 377 |
34342
|
nikon.gasp
|
public TasksDAO getTasksDao() {
|
| 378 |
|
|
return tasksDao;
|
| 379 |
18311
|
nikon.gasp
|
}
|
| 380 |
|
|
|
| 381 |
34342
|
nikon.gasp
|
public void setTasksDao(TasksDAO tasksDao) {
|
| 382 |
|
|
this.tasksDao = tasksDao;
|
| 383 |
18311
|
nikon.gasp
|
}
|
| 384 |
|
|
|
| 385 |
34342
|
nikon.gasp
|
public JobsDAO getJobsDao() {
|
| 386 |
|
|
return jobsDao;
|
| 387 |
18483
|
nikon.gasp
|
}
|
| 388 |
|
|
|
| 389 |
34342
|
nikon.gasp
|
public void setJobsDao(JobsDAO jobsDao) {
|
| 390 |
|
|
this.jobsDao = jobsDao;
|
| 391 |
18483
|
nikon.gasp
|
}
|
| 392 |
|
|
|
| 393 |
34342
|
nikon.gasp
|
public RulesDAO getRulesDao() {
|
| 394 |
|
|
return rulesDao;
|
| 395 |
18483
|
nikon.gasp
|
}
|
| 396 |
|
|
|
| 397 |
34342
|
nikon.gasp
|
public void setRulesDao(RulesDAO rulesDao) {
|
| 398 |
|
|
this.rulesDao = rulesDao;
|
| 399 |
18483
|
nikon.gasp
|
}
|
| 400 |
31252
|
nikon.gasp
|
|
| 401 |
34342
|
nikon.gasp
|
public Map<Integer, Rule> getRuleCacheMap() {
|
| 402 |
31252
|
nikon.gasp
|
return ruleCacheMap;
|
| 403 |
|
|
}
|
| 404 |
|
|
|
| 405 |
34342
|
nikon.gasp
|
public void setRuleCacheMap(Map<Integer, Rule> ruleCacheMap) {
|
| 406 |
31252
|
nikon.gasp
|
this.ruleCacheMap = ruleCacheMap;
|
| 407 |
|
|
}
|
| 408 |
34342
|
nikon.gasp
|
|
| 409 |
|
|
public String getValidationType() {
|
| 410 |
|
|
return validationType;
|
| 411 |
|
|
}
|
| 412 |
|
|
|
| 413 |
|
|
public void setValidationType(String validationType) {
|
| 414 |
|
|
this.validationType = validationType;
|
| 415 |
|
|
}
|
| 416 |
35423
|
nikon.gasp
|
|
| 417 |
41622
|
nikon.gasp
|
public Set<Integer> getBlacklistRuleIds() {
|
| 418 |
|
|
return blacklistRuleIds;
|
| 419 |
35423
|
nikon.gasp
|
}
|
| 420 |
|
|
|
| 421 |
41622
|
nikon.gasp
|
public void setBlacklistRuleIds(Set<Integer> blacklistRuleIds) {
|
| 422 |
|
|
this.blacklistRuleIds = blacklistRuleIds;
|
| 423 |
35423
|
nikon.gasp
|
}
|
| 424 |
41622
|
nikon.gasp
|
|
| 425 |
35423
|
nikon.gasp
|
|
| 426 |
|
|
|
| 427 |
41622
|
nikon.gasp
|
|
| 428 |
18252
|
nikon.gasp
|
}
|