Revision 54064
Added by Miriam Baglioni over 5 years ago
| modules/dnet-mapreduce-jobs/branches/master/src/main/java/eu/dnetlib/data/mapreduce/hbase/propagation/country/institutionalrepositories/PropagationCountryFromDsOrgResultFileReducer.java | ||
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| 10 | 10 |
import org.apache.hadoop.mapreduce.Reducer; |
| 11 | 11 |
|
| 12 | 12 |
import java.io.IOException; |
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import java.util.List; |
|
| 13 | 14 |
|
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import static eu.dnetlib.data.mapreduce.hbase.propagation.PropagationConstants.COUNTER_PROPAGATION; |
| 15 | 16 |
|
| ... | ... | |
| 33 | 34 |
|
| 34 | 35 |
outValue.set(data.getBytes()); |
| 35 | 36 |
try {
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keyOut.set(key); |
|
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context.write(keyOut, outValue); |
| 37 | 39 |
} catch (Exception e) {
|
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e.printStackTrace(); |
| ... | ... | |
| 53 | 55 |
context.getCounter(COUNTER_PROPAGATION,"institutional datasource").increment(1); |
| 54 | 56 |
|
| 55 | 57 |
while(rh.hasNext()){
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OafProtos.Oaf oafUpdate = rh.next(); |
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emit(context, rh.getResultId(), JsonFormat.printToString(oafUpdate));
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OafProtos.Oaf oafUpdate = rh.next().get(0);
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emit(context, oafUpdate.getEntity().getId(), JsonFormat.printToString(oafUpdate));
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context.getCounter(COUNTER_PROPAGATION, " added country to product ").increment(1); |
| 59 | 61 |
} |
| 60 | 62 |
|
| modules/dnet-mapreduce-jobs/branches/master/src/main/java/eu/dnetlib/data/mapreduce/hbase/propagation/country/institutionalrepositories/PropagationCountryFromDsOrgResultReducer.java | ||
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| 1 | 1 |
package eu.dnetlib.data.mapreduce.hbase.propagation.country.institutionalrepositories; |
| 2 | 2 |
|
| 3 | 3 |
import java.io.IOException; |
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import java.util.List; |
|
| 4 | 5 |
|
| 5 | 6 |
|
| 6 | 7 |
import eu.dnetlib.data.mapreduce.hbase.propagation.NotValidResultSequenceException; |
| 7 | 8 |
import eu.dnetlib.data.mapreduce.hbase.propagation.ResultIterator; |
| 8 | 9 |
import eu.dnetlib.data.mapreduce.hbase.propagation.Value; |
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import eu.dnetlib.data.proto.OafProtos; |
|
| 9 | 11 |
import org.apache.hadoop.hbase.io.ImmutableBytesWritable; |
| 10 | 12 |
import org.apache.hadoop.hbase.mapreduce.TableReducer; |
| 11 | 13 |
import org.apache.hadoop.hbase.util.Bytes; |
| ... | ... | |
| 45 | 47 |
context.getCounter(COUNTER_PROPAGATION,"institutional datasource").increment(1); |
| 46 | 48 |
|
| 47 | 49 |
while(rh.hasNext()){
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byte[] oafUpdate = rh.next().toByteArray(); |
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List<OafProtos.Oaf> oap = rh.next(); |
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byte[] oafUpdate = oap.get(0).toByteArray(); |
|
| 49 | 52 |
|
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byte[] targetRowKey = Bytes.toBytes(rh.getResultId());
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byte[] targetRowKey = Bytes.toBytes(oap.get(0).getEntity().getId());
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| 51 | 54 |
final Put put = new Put(targetRowKey).add(Bytes.toBytes("result"), Bytes.toBytes("update_" + System.nanoTime()), oafUpdate);
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| 52 | 55 |
keyOut.set(targetRowKey); |
| 53 | 56 |
context.write(keyOut, put); |
| modules/dnet-mapreduce-jobs/branches/master/src/main/java/eu/dnetlib/data/mapreduce/hbase/propagation/country/institutionalrepositories/ResultCountryIterator.java | ||
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| 9 | 9 |
import eu.dnetlib.data.proto.TypeProtos; |
| 10 | 10 |
import org.apache.hadoop.io.Text; |
| 11 | 11 |
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import java.util.ArrayList; |
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import java.util.Arrays; |
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import java.util.List; |
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|
|
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import static eu.dnetlib.data.mapreduce.hbase.propagation.PropagationConstants.*; |
| 13 | 17 |
import static eu.dnetlib.data.mapreduce.hbase.propagation.Utils.getCountry; |
| 14 | 18 |
|
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public class ResultCountryIterator extends ResultIterator {
|
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private String country; |
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private String trust; |
|
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|
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public ResultCountryIterator(final Iterable<Text> values, int key) throws NotValidResultSequenceException {
|
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super(values,key); |
| 21 | 25 |
} |
| ... | ... | |
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} |
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|
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@Override |
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public OafProtos.Oaf next() {
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public List<OafProtos.Oaf> next() {
|
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final ResultProtos.Result.Metadata.Builder metadata = ResultProtos.Result.Metadata.newBuilder().addCountry( |
| 84 | 88 |
getCountry(country,trust,DNET_COUNTRY_SCHEMA,CLASS_COUNTRY_ID,SCHEMA_ID,SCHEMA_NAME,DATA_INFO_TYPE,"Propagation of country information from datasources belonging to institutional repositories")); |
| 85 | 89 |
final ResultProtos.Result.Builder result = ResultProtos.Result.newBuilder().setMetadata(metadata); |
| ... | ... | |
| 92 | 96 |
else |
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resultId = TERMINATOR; |
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return OafProtos.Oaf.newBuilder() |
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return new ArrayList<OafProtos.Oaf>(Arrays.asList(OafProtos.Oaf.newBuilder()
|
|
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.setKind(KindProtos.Kind.entity) |
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.setEntity(entity) |
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.build(); |
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.build()));
|
|
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} |
| 100 | 104 |
|
| 101 | 105 |
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fixed issue