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package eu.dnetlib.data.mapreduce.util;
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import java.io.StringReader;
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import java.io.StringWriter;
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import java.util.List;
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import java.util.Map;
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import java.util.Map.Entry;
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import java.util.Set;
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import javax.xml.transform.*;
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import javax.xml.transform.dom.DOMSource;
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import javax.xml.transform.stream.StreamResult;
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michele.ar
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import com.google.common.base.Joiner;
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import com.google.common.base.Predicate;
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import com.google.common.base.Splitter;
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import com.google.common.collect.Iterables;
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import com.google.common.collect.Lists;
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import com.google.common.collect.Maps;
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import com.google.common.collect.Sets;
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import com.google.protobuf.Descriptors.EnumValueDescriptor;
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import com.google.protobuf.Descriptors.FieldDescriptor;
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import com.google.protobuf.GeneratedMessage;
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import com.mycila.xmltool.XMLDoc;
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import com.mycila.xmltool.XMLTag;
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import eu.dnetlib.data.mapreduce.hbase.index.config.*;
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import eu.dnetlib.data.proto.FieldTypeProtos.*;
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import eu.dnetlib.data.proto.OafProtos.OafEntity;
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import eu.dnetlib.data.proto.OafProtos.OafRel;
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import eu.dnetlib.data.proto.ProjectProtos.Project;
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import eu.dnetlib.data.proto.RelMetadataProtos.RelMetadata;
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import eu.dnetlib.data.proto.ResultProtos.Result;
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import eu.dnetlib.data.proto.ResultProtos.Result.Context;
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import eu.dnetlib.data.proto.ResultProtos.Result.ExternalReference;
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import eu.dnetlib.data.proto.ResultProtos.Result.Instance;
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import eu.dnetlib.data.proto.TypeProtos;
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import eu.dnetlib.data.proto.TypeProtos.Type;
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import org.apache.commons.lang3.StringUtils;
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import org.dom4j.Document;
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import org.dom4j.DocumentException;
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import org.dom4j.Element;
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import org.dom4j.Node;
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import org.dom4j.io.SAXReader;
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import static eu.dnetlib.miscutils.collections.MappedCollection.listMap;
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public class XmlRecordFactory {
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// private static final Log log = LogFactory.getLog(XmlRecordFactory.class); // NOPMD by marko on 11/24/08 5:02 PM
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private final Map<String, Integer> relCounters = Maps.newHashMap();
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protected Set<String> specialDatasourceTypes;
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protected TemplateFactory templateFactory = new TemplateFactory();
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protected OafDecoder mainEntity = null;
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protected String key = null;
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protected List<OafDecoder> relations = Lists.newLinkedList();
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protected List<OafDecoder> children = Lists.newLinkedList();
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protected EntityConfigTable entityConfigTable;
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protected ContextMapper contextMapper;
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protected RelClasses relClasses;
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protected String schemaLocation;
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protected boolean entityDefaults;
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protected boolean relDefaults;
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protected boolean childDefaults;
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protected Set<String> contextes = Sets.newHashSet();
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protected List<String> extraInfo = Lists.newArrayList();
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protected Map<String, Integer> counters = Maps.newHashMap();
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protected Transformer transformer;
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protected static Predicate<String> instanceFilter = new Predicate<String>() {
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final Set<String> instanceFieldFilter = Sets.newHashSet("instancetype", "hostedby", "license", "accessright", "collectedfrom", "dateofacceptance", "distributionlocation", "refereed");
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@Override
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public boolean apply(final String s) {
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return instanceFieldFilter.contains(s);
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}
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};
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public XmlRecordFactory(final EntityConfigTable entityConfigTable, final ContextMapper contextMapper, final RelClasses relClasses,
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final String schemaLocation, final boolean entityDefaults, final boolean relDefaults, final boolean childDefeaults, final Set<String> otherDatasourceTypesUForUI)
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throws TransformerConfigurationException, TransformerFactoryConfigurationError {
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this.entityConfigTable = entityConfigTable;
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this.contextMapper = contextMapper;
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this.relClasses = relClasses;
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this.schemaLocation = schemaLocation;
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this.entityDefaults = entityDefaults;
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this.relDefaults = relDefaults;
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this.childDefaults = childDefeaults;
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this.specialDatasourceTypes = otherDatasourceTypesUForUI;
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transformer = TransformerFactory.newInstance().newTransformer();
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transformer.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes");
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}
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public static String removePrefix(final String s) {
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if (s.contains("|")) return StringUtils.substringAfter(s, "|");
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return s;
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}
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public static String escapeXml(final String value) {
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return value.replaceAll("&", "&").replaceAll("<", "<").replaceAll(">", ">").replaceAll("\"", """).replaceAll("'", "'");
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}
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public Map<String, Integer> getRelCounters() {
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return relCounters;
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}
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public RelClasses getRelClasses() {
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return relClasses;
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}
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public String getId() {
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return key;
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}
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public boolean isValid() {
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return mainEntity != null;
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}
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public void setMainEntity(final OafDecoder mainEntity) {
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this.mainEntity = mainEntity;
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this.key = mainEntity.decodeEntity().getId();
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}
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public void addRelation(final Type type, final OafDecoder rel) {
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addRelOrChild(type, relations, rel);
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}
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public void addChild(final Type type, final OafDecoder child) {
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addRelOrChild(type, children, child);
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}
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private void addRelOrChild(final Type type, final List<OafDecoder> list, final OafDecoder decoder) {
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final OafRel oafRel = decoder.getOafRel();
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final String rd = oafRel.getRelType().toString() + "_" + oafRel.getSubRelType() + "_" + relClasses.getInverse(oafRel.getRelClass());
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final LinkDescriptor ld = entityConfigTable.getDescriptor(type, new RelDescriptor(rd));
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if (getRelCounters().get(rd) == null) {
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getRelCounters().put(rd, 0);
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}
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if (ld == null) {
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list.add(decoder);
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return;
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}
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if (ld.getMax() < 0) {
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list.add(decoder);
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return;
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}
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if (getRelCounters().get(rd) < ld.getMax()) {
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getRelCounters().put(rd, getRelCounters().get(rd) + 1);
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list.add(decoder);
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}
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}
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public String build() {
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try {
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final OafEntityDecoder entity = mainEntity.decodeEntity();
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// log.info("building");
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// log.info("main: " + mainEntity);
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// log.info("rel: " + relations);
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// log.info("chi: " + children);
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// log.info("=============");
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final Predicate<String> filter = entityConfigTable.getFilter(entity.getType());
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final List<String> metadata = decodeType(entity, filter, entityDefaults, false);
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// rels has to be processed before the contexts because they enrich the contextMap with the funding info.
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final List<String> rels = listRelations();
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metadata.addAll(buildContexts(entity.getType()));
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metadata.add(parseDataInfo(mainEntity));
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final String body = templateFactory.buildBody(entity.getType(), metadata, rels, listChildren(), extraInfo);
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return templateFactory
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.buildRecord(key, entity.getDateOfCollection(), entity.getDateOfTransformation(), schemaLocation, body, countersAsXml());
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} catch (final Throwable e) {
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throw new RuntimeException(String.format("error building record '%s'", this.key), e);
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}
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}
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private String parseDataInfo(final OafDecoder decoder) {
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final DataInfo dataInfo = decoder.getOaf().getDataInfo();
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final StringBuilder sb = new StringBuilder();
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sb.append("<datainfo>");
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sb.append(asXmlElement("inferred", dataInfo.getInferred() + "", null, null));
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sb.append(asXmlElement("deletedbyinference", dataInfo.getDeletedbyinference() + "", null, null));
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sb.append(asXmlElement("trust", dataInfo.getTrust() + "", null, null));
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sb.append(asXmlElement("inferenceprovenance", dataInfo.getInferenceprovenance() + "", null, null));
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sb.append(asXmlElement("provenanceaction", null, dataInfo.getProvenanceaction(), null));
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sb.append("</datainfo>");
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return sb.toString();
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}
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private List<String> decodeType(final OafEntityDecoder decoder, final Predicate<String> filter, final boolean defaults, final boolean expandingRel) {
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final List<String> metadata = Lists.newArrayList();
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metadata.addAll(listFields(decoder.getMetadata(), filter, defaults, expandingRel));
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metadata.addAll(listFields(decoder.getOafEntity(), filter, defaults, expandingRel));
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if ((decoder.getEntity() instanceof Result) && !expandingRel) {
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metadata.add(asXmlElement("bestaccessright", "", getBestAccessright(), null));
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metadata.addAll(listFields(decoder.getEntity(), filter, defaults, expandingRel));
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}
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if ((decoder.getEntity() instanceof Project) && !expandingRel) {
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metadata.addAll(listFields(decoder.getEntity(), filter, defaults, expandingRel));
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}
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return metadata;
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}
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private Qualifier getBestAccessright() {
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Qualifier bestAccessRight = getQualifier("UNKNOWN", "not available", "dnet:access_modes");
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final LicenseComparator lc = new LicenseComparator();
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for (final Instance instance : ((Result) mainEntity.decodeEntity().getEntity()).getInstanceList()) {
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if (lc.compare(bestAccessRight, instance.getAccessright()) > 0) {
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bestAccessRight = instance.getAccessright();
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}
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}
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return bestAccessRight;
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}
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public Qualifier getQualifier(final String classid, final String classname, final String schemename) {
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return Qualifier.newBuilder().setClassid(classid).setClassname(classname).setSchemeid(schemename).setSchemename(schemename).build();
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}
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private List<String> listRelations() {
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| 232 |
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final List<String> rels = Lists.newArrayList();
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for (final OafDecoder decoder : this.relations) {
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final OafRel rel = decoder.getOafRel();
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| 238 |
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final OafEntity cachedTarget = rel.getCachedTarget();
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| 239 |
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final OafRelDecoder relDecoder = OafRelDecoder.decode(rel);
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| 240 |
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// if (!relDecoder.getRelType().equals(RelType.personResult) || relDecoder.getRelTargetId().equals(key)) {
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| 242 |
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if (relDecoder.getRelSourceId().equals(key) || relDecoder.getRelTargetId().equals(key)) {
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final List<String> metadata = Lists.newArrayList();
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final TypeProtos.Type targetType = relDecoder.getTargetType(mainEntity.getEntity().getType());
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| 246 |
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//final Set<String> relFilter = entityConfigTable.getFilter(targetType, relDecoder.getRelDescriptor());
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| 247 |
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metadata.addAll(listFields(relDecoder.getSubRel(), entityConfigTable.getIncludeFilter(targetType, relDecoder.getRelDescriptor()), false, true));
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String semanticclass = "";
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| 250 |
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String semanticscheme = "";
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| 251 |
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final RelDescriptor relDescriptor = relDecoder.getRelDescriptor();
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if ((cachedTarget != null) && cachedTarget.isInitialized()) {
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//final Set<String> filter = entityConfigTable.getFilter(targetType, relDescriptor);
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final OafEntityDecoder d = OafEntityDecoder.decode(cachedTarget);
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metadata.addAll(decodeType(d, entityConfigTable.getIncludeFilter(targetType, relDescriptor), relDefaults, true));
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if (d.getType().equals(Type.result)) {
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| 260 |
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for(Instance i : cachedTarget.getResult().getInstanceList()) {
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| 261 |
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final List<String> fields = listFields(i, entityConfigTable.getIncludeFilter(targetType, relDecoder.getRelDescriptor()), false, true);
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| 262 |
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metadata.addAll(fields);
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}
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| 264 |
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}
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}
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| 267 |
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final RelMetadata relMetadata = relDecoder.getRelMetadata();
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| 268 |
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// debug
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| 269 |
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if (relMetadata == null) {
|
| 270 |
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// System.err.println(this);
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| 271 |
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semanticclass = semanticscheme = "UNKNOWN";
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} else {
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| 273 |
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semanticclass = relClasses.getInverse(relMetadata.getSemantics().getClassname());
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| 274 |
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semanticscheme = relMetadata.getSemantics().getSchemename();
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| 275 |
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}
|
| 276 |
|
|
|
| 277 |
42584
|
claudio.at
|
final String rd = relDescriptor.getSubRelType().toString();
|
| 278 |
|
|
incrementCounter(rd);
|
| 279 |
28226
|
claudio.at
|
|
| 280 |
42584
|
claudio.at
|
final DataInfo info = decoder.getOaf().getDataInfo();
|
| 281 |
|
|
if (info.getInferred()) {
|
| 282 |
|
|
incrementCounter(rd + "_inferred");
|
| 283 |
|
|
} else if(StringUtils.startsWith(info.getProvenanceaction().getClassid(), "sysimport:crosswalk")) {
|
| 284 |
|
|
incrementCounter(rd + "_collected");
|
| 285 |
|
|
} else if(StringUtils.startsWith(info.getProvenanceaction().getClassid(), "user:")) {
|
| 286 |
|
|
incrementCounter(rd + "_claimed");
|
| 287 |
|
|
}
|
| 288 |
|
|
|
| 289 |
35771
|
claudio.at
|
final LinkDescriptor ld = entityConfigTable.getDescriptor(relDecoder.getTargetType(mainEntity.getEntity().getType()), relDescriptor);
|
| 290 |
28226
|
claudio.at
|
|
| 291 |
35771
|
claudio.at
|
final String relId = (ld != null) && !ld.isSymmetric() ? relDecoder.getRelTargetId() : relDecoder.getRelSourceId();
|
| 292 |
28226
|
claudio.at
|
|
| 293 |
48697
|
claudio.at
|
rels.add(templateFactory.getRel(targetType, relId, Sets.newHashSet(metadata), semanticclass, semanticscheme, info.getInferred(), info.getTrust(),
|
| 294 |
28226
|
claudio.at
|
info.getInferenceprovenance(), info.getProvenanceaction().getClassid()));
|
| 295 |
26600
|
sandro.lab
|
}
|
| 296 |
|
|
}
|
| 297 |
|
|
return rels;
|
| 298 |
|
|
}
|
| 299 |
|
|
|
| 300 |
40314
|
claudio.at
|
// //////////////////////////////////
|
| 301 |
|
|
|
| 302 |
26600
|
sandro.lab
|
private List<String> listChildren() {
|
| 303 |
|
|
|
| 304 |
|
|
final List<String> children = Lists.newArrayList();
|
| 305 |
35771
|
claudio.at
|
for (final OafDecoder decoder : this.children) {
|
| 306 |
|
|
final OafEntity cachedTarget = decoder.getOafRel().getCachedTarget();
|
| 307 |
30968
|
claudio.at
|
addChildren(children, cachedTarget, decoder.getRelDescriptor());
|
| 308 |
26600
|
sandro.lab
|
}
|
| 309 |
35771
|
claudio.at
|
final OafEntityDecoder entity = mainEntity.decodeEntity();
|
| 310 |
26600
|
sandro.lab
|
if (entity.getType().equals(Type.result)) {
|
| 311 |
35771
|
claudio.at
|
for (final Instance instance : ((Result) entity.getEntity()).getInstanceList()) {
|
| 312 |
58086
|
claudio.at
|
final List<String> instancemetadata = listFields(instance, instanceFilter, false, false);
|
| 313 |
|
|
|
| 314 |
|
|
if (instance.hasProcessingchargeamount()) {
|
| 315 |
|
|
instancemetadata.add("<processingchargeamount currency=\""
|
| 316 |
|
|
+ instance.getProcessingchargecurrency().getValue() + "\">"
|
| 317 |
|
|
+ instance.getProcessingchargeamount().getValue()
|
| 318 |
|
|
+ "</processingchargeamount>");
|
| 319 |
|
|
}
|
| 320 |
|
|
|
| 321 |
|
|
children.add(templateFactory.getInstance(instance.getHostedby().getKey(), instancemetadata,
|
| 322 |
48697
|
claudio.at
|
listMap(instance.getUrlList(), identifier -> templateFactory.getWebResource(identifier))));
|
| 323 |
26600
|
sandro.lab
|
}
|
| 324 |
35771
|
claudio.at
|
for (final ExternalReference er : ((Result) entity.getEntity()).getExternalReferenceList()) {
|
| 325 |
26600
|
sandro.lab
|
// Set<String> filters = entityConfigTable.getFilter(Type.result, RelType.resultResult);
|
| 326 |
35771
|
claudio.at
|
final List<String> fields = listFields(er, null, false, false);
|
| 327 |
26600
|
sandro.lab
|
children.add(templateFactory.getChild("externalreference", null, fields));
|
| 328 |
|
|
}
|
| 329 |
|
|
}
|
| 330 |
|
|
|
| 331 |
|
|
return children;
|
| 332 |
|
|
}
|
| 333 |
|
|
|
| 334 |
28094
|
claudio.at
|
private void addChildren(final List<String> children, final OafEntity target, final RelDescriptor relDescriptor) {
|
| 335 |
26600
|
sandro.lab
|
final OafEntityDecoder decoder = OafEntityDecoder.decode(target);
|
| 336 |
30968
|
claudio.at
|
incrementCounter(relDescriptor.getSubRelType().toString());
|
| 337 |
46587
|
alessia.ba
|
final Predicate<String> filter = entityConfigTable.getIncludeFilter(target.getType(), relDescriptor);
|
| 338 |
|
|
children.add(templateFactory.getChild(decoder.getType().toString(), decoder.getId(), listFields(decoder.getMetadata(), filter, childDefaults, false)));
|
| 339 |
26600
|
sandro.lab
|
}
|
| 340 |
|
|
|
| 341 |
46587
|
alessia.ba
|
private List<String> listFields(final GeneratedMessage fields, final Predicate<String> filter, final boolean defaults, final boolean expandingRel) {
|
| 342 |
26600
|
sandro.lab
|
|
| 343 |
|
|
final List<String> metadata = Lists.newArrayList();
|
| 344 |
|
|
|
| 345 |
|
|
if (fields != null) {
|
| 346 |
|
|
|
| 347 |
35771
|
claudio.at
|
final Set<String> seen = Sets.newHashSet();
|
| 348 |
26600
|
sandro.lab
|
|
| 349 |
46587
|
alessia.ba
|
final Map<FieldDescriptor, Object> filtered = filterFields(fields, filter);
|
| 350 |
|
|
for (final Entry<FieldDescriptor, Object> e : filtered.entrySet()) {
|
| 351 |
|
|
|
| 352 |
26600
|
sandro.lab
|
final String name = e.getKey().getName();
|
| 353 |
|
|
seen.add(name);
|
| 354 |
|
|
addFieldValue(metadata, e.getKey(), e.getValue(), expandingRel);
|
| 355 |
|
|
}
|
| 356 |
|
|
|
| 357 |
|
|
if (defaults) {
|
| 358 |
49029
|
claudio.at
|
final Iterable<FieldDescriptor> unseen =
|
| 359 |
|
|
Iterables.filter(fields.getDescriptorForType().getFields(), fd -> !seen.contains(fd.getName()) && filter.apply(fd.getName()));
|
| 360 |
46587
|
alessia.ba
|
for(FieldDescriptor fd : unseen){
|
| 361 |
|
|
addFieldValue(metadata, fd, getDefault(fd), expandingRel);
|
| 362 |
26600
|
sandro.lab
|
}
|
| 363 |
|
|
}
|
| 364 |
|
|
}
|
| 365 |
|
|
return metadata;
|
| 366 |
|
|
}
|
| 367 |
|
|
|
| 368 |
|
|
private Object getDefault(final FieldDescriptor fd) {
|
| 369 |
|
|
switch (fd.getType()) {
|
| 370 |
|
|
case BOOL:
|
| 371 |
|
|
return false;
|
| 372 |
|
|
case BYTES:
|
| 373 |
|
|
return "".getBytes();
|
| 374 |
|
|
case MESSAGE: {
|
| 375 |
35771
|
claudio.at
|
if (Qualifier.getDescriptor().equals(fd.getMessageType())) return defaultQualifier();
|
| 376 |
37894
|
alessia.ba
|
if (StructuredProperty.getDescriptor().equals(fd.getMessageType()))
|
| 377 |
|
|
return StructuredProperty.newBuilder().setValue("").setQualifier(defaultQualifier()).build();
|
| 378 |
35771
|
claudio.at
|
if (KeyValue.getDescriptor().equals(fd.getMessageType())) return KeyValue.newBuilder().setKey("").setValue("").build();
|
| 379 |
|
|
if (StringField.getDescriptor().equals(fd.getMessageType())) return StringField.newBuilder().setValue("").build();
|
| 380 |
37616
|
claudio.at
|
if (BoolField.getDescriptor().equals(fd.getMessageType())) return BoolField.newBuilder().buildPartial();
|
| 381 |
26600
|
sandro.lab
|
return null;
|
| 382 |
|
|
}
|
| 383 |
|
|
case SFIXED32:
|
| 384 |
|
|
case SFIXED64:
|
| 385 |
|
|
case SINT32:
|
| 386 |
|
|
case SINT64:
|
| 387 |
|
|
case INT32:
|
| 388 |
|
|
case INT64:
|
| 389 |
|
|
case FIXED32:
|
| 390 |
|
|
case FIXED64:
|
| 391 |
57774
|
alessia.ba
|
case DOUBLE:
|
| 392 |
26600
|
sandro.lab
|
case FLOAT:
|
| 393 |
|
|
case STRING:
|
| 394 |
|
|
return "";
|
| 395 |
|
|
default:
|
| 396 |
|
|
return null;
|
| 397 |
|
|
}
|
| 398 |
|
|
}
|
| 399 |
|
|
|
| 400 |
|
|
private Qualifier defaultQualifier() {
|
| 401 |
|
|
return Qualifier.newBuilder().setClassid("").setClassname("").setSchemeid("").setSchemename("").build();
|
| 402 |
|
|
}
|
| 403 |
|
|
|
| 404 |
|
|
@SuppressWarnings("unchecked")
|
| 405 |
|
|
private void addFieldValue(final List<String> metadata, final FieldDescriptor fd, final Object value, final boolean expandingRel) {
|
| 406 |
42501
|
claudio.at
|
if ("dateofcollection".equals(fd.getName()) ||
|
| 407 |
|
|
"dateoftransformation".equals(fd.getName()) ||
|
| 408 |
|
|
"id".equals(fd.getName()) ||
|
| 409 |
|
|
(value == null)) return;
|
| 410 |
26600
|
sandro.lab
|
|
| 411 |
|
|
if (fd.getName().equals("datasourcetype")) {
|
| 412 |
35771
|
claudio.at
|
final String classid = ((Qualifier) value).getClassid();
|
| 413 |
26600
|
sandro.lab
|
|
| 414 |
35771
|
claudio.at
|
final Qualifier.Builder q = Qualifier.newBuilder((Qualifier) value);
|
| 415 |
26600
|
sandro.lab
|
if (specialDatasourceTypes.contains(classid)) {
|
| 416 |
|
|
q.setClassid("other").setClassname("other");
|
| 417 |
|
|
}
|
| 418 |
28094
|
claudio.at
|
metadata.add(asXmlElement("datasourcetypeui", "", q.build(), null));
|
| 419 |
26600
|
sandro.lab
|
}
|
| 420 |
|
|
|
| 421 |
35771
|
claudio.at
|
if (fd.isRepeated() && (value instanceof List<?>)) {
|
| 422 |
|
|
for (final Object o : (List<Object>) value) {
|
| 423 |
26600
|
sandro.lab
|
guessType(metadata, fd, o, expandingRel);
|
| 424 |
|
|
}
|
| 425 |
|
|
} else {
|
| 426 |
|
|
guessType(metadata, fd, value, expandingRel);
|
| 427 |
|
|
}
|
| 428 |
|
|
}
|
| 429 |
|
|
|
| 430 |
|
|
private void guessType(final List<String> metadata, final FieldDescriptor fd, final Object o, final boolean expandingRel) {
|
| 431 |
|
|
|
| 432 |
|
|
if (fd.getType().equals(FieldDescriptor.Type.MESSAGE)) {
|
| 433 |
|
|
|
| 434 |
49029
|
claudio.at
|
if(Author.getDescriptor().equals(fd.getMessageType())) {
|
| 435 |
|
|
|
| 436 |
|
|
final Author a = (Author) o;
|
| 437 |
|
|
|
| 438 |
|
|
final StringBuilder sb = new StringBuilder("<creator rank=\"" + a.getRank() + "\"");
|
| 439 |
|
|
if (a.hasName()) {
|
| 440 |
|
|
sb.append(" name=\"" + escapeXml(a.getName()) + "\"");
|
| 441 |
|
|
}
|
| 442 |
|
|
if (a.hasSurname()) {
|
| 443 |
|
|
sb.append(" surname=\"" + escapeXml(a.getSurname()) + "\"");
|
| 444 |
|
|
}
|
| 445 |
52524
|
claudio.at
|
if (a.getPidCount() > 0) {
|
| 446 |
|
|
a.getPidList().stream()
|
| 447 |
53371
|
claudio.at
|
.filter(kv -> StringUtils.isNotBlank(kv.getKey()) && StringUtils.isNotBlank(kv.getValue()))
|
| 448 |
|
|
.forEach(kv -> {
|
| 449 |
|
|
String pidType = escapeXml(kv.getKey())
|
| 450 |
|
|
.replaceAll("\\W", "");
|
| 451 |
|
|
String pidValue = escapeXml(kv.getValue());
|
| 452 |
|
|
sb.append(String.format(" %s=\"%s\"", pidType, pidValue));
|
| 453 |
|
|
});
|
| 454 |
52524
|
claudio.at
|
}
|
| 455 |
|
|
|
| 456 |
49029
|
claudio.at
|
sb.append(">" + escapeXml(a.getFullname()) + "</creator>");
|
| 457 |
|
|
|
| 458 |
|
|
metadata.add(sb.toString());
|
| 459 |
|
|
}
|
| 460 |
|
|
|
| 461 |
26600
|
sandro.lab
|
if (Qualifier.getDescriptor().equals(fd.getMessageType())) {
|
| 462 |
35771
|
claudio.at
|
final Qualifier qualifier = (Qualifier) o;
|
| 463 |
28094
|
claudio.at
|
metadata.add(asXmlElement(fd.getName(), "", qualifier, null));
|
| 464 |
26600
|
sandro.lab
|
}
|
| 465 |
|
|
|
| 466 |
|
|
if (StructuredProperty.getDescriptor().equals(fd.getMessageType())) {
|
| 467 |
35771
|
claudio.at
|
final StructuredProperty sp = (StructuredProperty) o;
|
| 468 |
28094
|
claudio.at
|
metadata.add(asXmlElement(fd.getName(), sp.getValue(), sp.getQualifier(), sp.hasDataInfo() ? sp.getDataInfo() : null));
|
| 469 |
41681
|
claudio.at
|
|
| 470 |
|
|
if (!expandingRel && fd.getName().equals("pid")) {
|
| 471 |
|
|
if (sp.getQualifier().getClassid().equalsIgnoreCase("doi")) {
|
| 472 |
|
|
incrementCounter("doi");
|
| 473 |
|
|
}
|
| 474 |
|
|
}
|
| 475 |
26600
|
sandro.lab
|
}
|
| 476 |
|
|
|
| 477 |
|
|
if (KeyValue.getDescriptor().equals(fd.getMessageType())) {
|
| 478 |
35771
|
claudio.at
|
final KeyValue kv = (KeyValue) o;
|
| 479 |
26600
|
sandro.lab
|
metadata.add("<" + fd.getName() + " name=\"" + escapeXml(kv.getValue()) + "\" id=\"" + escapeXml(removePrefix(kv.getKey())) + "\"/>");
|
| 480 |
|
|
}
|
| 481 |
|
|
|
| 482 |
28094
|
claudio.at
|
if (StringField.getDescriptor().equals(fd.getMessageType())) {
|
| 483 |
35771
|
claudio.at
|
final String fieldName = fd.getName();
|
| 484 |
35179
|
michele.ar
|
|
| 485 |
|
|
if (fieldName.equals("fundingtree")) {
|
| 486 |
35771
|
claudio.at
|
final String xmlTree = o instanceof StringField ? ((StringField) o).getValue() : o.toString();
|
| 487 |
35179
|
michele.ar
|
|
| 488 |
|
|
if (expandingRel) {
|
| 489 |
|
|
metadata.add(getRelFundingTree(xmlTree));
|
| 490 |
|
|
fillContextMap(xmlTree);
|
| 491 |
|
|
} else {
|
| 492 |
|
|
metadata.add(xmlTree);
|
| 493 |
|
|
}
|
| 494 |
28094
|
claudio.at
|
} else {
|
| 495 |
35771
|
claudio.at
|
final StringField sf = (StringField) o;
|
| 496 |
|
|
final StringBuilder sb = new StringBuilder("<" + fd.getName());
|
| 497 |
28094
|
claudio.at
|
if (sf.hasDataInfo()) {
|
| 498 |
35771
|
claudio.at
|
final DataInfo dataInfo = sf.getDataInfo();
|
| 499 |
28094
|
claudio.at
|
dataInfoAsAttributes(sb, dataInfo);
|
| 500 |
|
|
}
|
| 501 |
|
|
sb.append(">" + escapeXml(sf.getValue()) + "</" + fd.getName() + ">");
|
| 502 |
|
|
metadata.add(sb.toString());
|
| 503 |
|
|
}
|
| 504 |
|
|
}
|
| 505 |
37616
|
claudio.at
|
|
| 506 |
|
|
if (BoolField.getDescriptor().equals(fd.getMessageType())) {
|
| 507 |
|
|
final BoolField bf = (BoolField) o;
|
| 508 |
|
|
final StringBuilder sb = new StringBuilder("<" + fd.getName());
|
| 509 |
|
|
if (bf.hasDataInfo()) {
|
| 510 |
|
|
final DataInfo dataInfo = bf.getDataInfo();
|
| 511 |
|
|
dataInfoAsAttributes(sb, dataInfo);
|
| 512 |
|
|
}
|
| 513 |
|
|
|
| 514 |
|
|
sb.append(">" + (bf.hasValue() ? bf.getValue() : "") + "</" + fd.getName() + ">");
|
| 515 |
|
|
metadata.add(sb.toString());
|
| 516 |
|
|
}
|
| 517 |
|
|
|
| 518 |
35771
|
claudio.at
|
if (Journal.getDescriptor().equals(fd.getMessageType()) && (o != null)) {
|
| 519 |
|
|
final Journal j = (Journal) o;
|
| 520 |
26600
|
sandro.lab
|
metadata.add("<journal " + "issn=\"" + escapeXml(j.getIssnPrinted()) + "\" " + "eissn=\"" + escapeXml(j.getIssnOnline()) + "\" " + "lissn=\""
|
| 521 |
46587
|
alessia.ba
|
+ escapeXml(j.getIssnLinking()) + "\" " + "ep=\"" + escapeXml(j.getEp()) + "\" " + "iss=\"" + escapeXml(j.getIss()) + "\" " + "sp=\""
|
| 522 |
|
|
+ escapeXml(j.getSp()) + "\" " + "vol=\"" + escapeXml(j.getVol()) + "\">" + escapeXml(j.getName()) + "</journal>");
|
| 523 |
26600
|
sandro.lab
|
}
|
| 524 |
|
|
|
| 525 |
35771
|
claudio.at
|
if (Context.getDescriptor().equals(fd.getMessageType()) && (o != null)) {
|
| 526 |
52751
|
alessia.ba
|
final String contextid = ((Context) o).getId();
|
| 527 |
|
|
contextes.add(contextid);
|
| 528 |
|
|
/* FIXME: Workaround for CLARIN mining issue: #3670#note-29 */
|
| 529 |
|
|
if(contextid.equalsIgnoreCase("dh-ch::subcommunity::2")){
|
| 530 |
|
|
contextes.add("clarin");
|
| 531 |
|
|
}
|
| 532 |
|
|
|
| 533 |
26600
|
sandro.lab
|
}
|
| 534 |
|
|
|
| 535 |
35771
|
claudio.at
|
if (ExtraInfo.getDescriptor().equals(fd.getMessageType()) && (o != null)) {
|
| 536 |
26600
|
sandro.lab
|
|
| 537 |
35771
|
claudio.at
|
final ExtraInfo e = (ExtraInfo) o;
|
| 538 |
|
|
final StringBuilder sb = new StringBuilder("<" + fd.getName() + " ");
|
| 539 |
28094
|
claudio.at
|
|
| 540 |
|
|
sb.append("name=\"" + e.getName() + "\" ");
|
| 541 |
|
|
sb.append("typology=\"" + e.getTypology() + "\" ");
|
| 542 |
|
|
sb.append("provenance=\"" + e.getProvenance() + "\" ");
|
| 543 |
|
|
sb.append("trust=\"" + e.getTrust() + "\"");
|
| 544 |
|
|
sb.append(">");
|
| 545 |
30827
|
claudio.at
|
sb.append(e.getValue());
|
| 546 |
26600
|
sandro.lab
|
sb.append("</" + fd.getName() + ">");
|
| 547 |
28094
|
claudio.at
|
|
| 548 |
|
|
extraInfo.add(sb.toString());
|
| 549 |
26600
|
sandro.lab
|
}
|
| 550 |
|
|
|
| 551 |
|
|
} else if (fd.getType().equals(FieldDescriptor.Type.ENUM)) {
|
| 552 |
35771
|
claudio.at
|
if (fd.getFullName().equals("eu.dnetlib.data.proto.OafEntity.type")) return;
|
| 553 |
28094
|
claudio.at
|
metadata.add(asXmlElement(fd.getName(), ((EnumValueDescriptor) o).getName(), null, null));
|
| 554 |
26600
|
sandro.lab
|
} else {
|
| 555 |
57774
|
alessia.ba
|
if(o instanceof String && o.equals("")){
|
| 556 |
|
|
metadata.add(asXmlElement(fd.getName(), "", null, null));
|
| 557 |
57758
|
alessia.ba
|
}
|
| 558 |
57774
|
alessia.ba
|
else {
|
| 559 |
|
|
switch (fd.getType()) {
|
| 560 |
|
|
case SFIXED32:
|
| 561 |
|
|
case SFIXED64:
|
| 562 |
|
|
case SINT32:
|
| 563 |
|
|
case SINT64:
|
| 564 |
|
|
case INT32:
|
| 565 |
|
|
case INT64:
|
| 566 |
|
|
case FIXED32:
|
| 567 |
|
|
case FIXED64:
|
| 568 |
|
|
metadata.add(asXmlElement(fd.getName(), String.format("%s", o), null, null));
|
| 569 |
|
|
break;
|
| 570 |
|
|
case DOUBLE:
|
| 571 |
|
|
case FLOAT:
|
| 572 |
|
|
metadata.add(asXmlElement(fd.getName(), String.format("%.2f", ((Float) o)), null, null));
|
| 573 |
|
|
break;
|
| 574 |
|
|
default:
|
| 575 |
|
|
metadata.add(asXmlElement(fd.getName(), o.toString(), null, null));
|
| 576 |
|
|
}
|
| 577 |
|
|
}
|
| 578 |
26600
|
sandro.lab
|
}
|
| 579 |
|
|
}
|
| 580 |
|
|
|
| 581 |
28226
|
claudio.at
|
private StringBuilder dataInfoAsAttributes(final StringBuilder sb, final DataInfo dataInfo) {
|
| 582 |
28094
|
claudio.at
|
sb.append(" inferred=\"" + dataInfo.getInferred() + "\"");
|
| 583 |
|
|
sb.append(" inferenceprovenance=\"" + dataInfo.getInferenceprovenance() + "\"");
|
| 584 |
30863
|
claudio.at
|
sb.append(" provenanceaction=\"" + dataInfo.getProvenanceaction().getClassid() + "\"");
|
| 585 |
28094
|
claudio.at
|
sb.append(" trust=\"" + dataInfo.getTrust() + "\" ");
|
| 586 |
|
|
return sb;
|
| 587 |
26600
|
sandro.lab
|
}
|
| 588 |
|
|
|
| 589 |
|
|
private List<String> buildContexts(final Type type) {
|
| 590 |
|
|
final List<String> res = Lists.newArrayList();
|
| 591 |
|
|
|
| 592 |
35771
|
claudio.at
|
if ((contextMapper != null) && !contextMapper.isEmpty() && type.equals(Type.result)) {
|
| 593 |
26600
|
sandro.lab
|
|
| 594 |
|
|
XMLTag document = XMLDoc.newDocument(true).addRoot("contextRoot");
|
| 595 |
|
|
|
| 596 |
37717
|
claudio.at
|
for (final String context : contextes) {
|
| 597 |
26600
|
sandro.lab
|
|
| 598 |
37717
|
claudio.at
|
String id = "";
|
| 599 |
|
|
for (final String token : Splitter.on("::").split(context)) {
|
| 600 |
|
|
id += token;
|
| 601 |
26600
|
sandro.lab
|
|
| 602 |
37717
|
claudio.at
|
final ContextDef def = contextMapper.get(id);
|
| 603 |
26600
|
sandro.lab
|
|
| 604 |
51221
|
claudio.at
|
if (def == null) {
|
| 605 |
|
|
continue;
|
| 606 |
|
|
// throw new IllegalStateException(String.format("cannot find context for id '%s'", id));
|
| 607 |
|
|
}
|
| 608 |
26600
|
sandro.lab
|
|
| 609 |
|
|
if (def.getName().equals("context")) {
|
| 610 |
35771
|
claudio.at
|
final String xpath = "//context/@id='" + def.getId() + "'";
|
| 611 |
26600
|
sandro.lab
|
if (!document.gotoRoot().rawXpathBoolean(xpath, new Object())) {
|
| 612 |
|
|
document = addContextDef(document.gotoRoot(), def);
|
| 613 |
|
|
}
|
| 614 |
|
|
}
|
| 615 |
|
|
|
| 616 |
|
|
if (def.getName().equals("category")) {
|
| 617 |
35771
|
claudio.at
|
final String rootId = StringUtils.substringBefore(def.getId(), "::");
|
| 618 |
26600
|
sandro.lab
|
document = addContextDef(document.gotoRoot().gotoTag("//context[./@id='" + rootId + "']", new Object()), def);
|
| 619 |
|
|
}
|
| 620 |
|
|
|
| 621 |
|
|
if (def.getName().equals("concept")) {
|
| 622 |
|
|
document = addContextDef(document, def).gotoParent();
|
| 623 |
|
|
}
|
| 624 |
37717
|
claudio.at
|
id += "::";
|
| 625 |
26600
|
sandro.lab
|
}
|
| 626 |
|
|
}
|
| 627 |
|
|
|
| 628 |
35771
|
claudio.at
|
for (final org.w3c.dom.Element x : document.gotoRoot().getChildElement()) {
|
| 629 |
26600
|
sandro.lab
|
try {
|
| 630 |
|
|
res.add(asStringElement(x));
|
| 631 |
35771
|
claudio.at
|
} catch (final TransformerException e) {
|
| 632 |
26600
|
sandro.lab
|
throw new RuntimeException(e);
|
| 633 |
|
|
}
|
| 634 |
|
|
}
|
| 635 |
|
|
}
|
| 636 |
|
|
|
| 637 |
|
|
return res;
|
| 638 |
|
|
}
|
| 639 |
|
|
|
| 640 |
|
|
private XMLTag addContextDef(final XMLTag tag, final ContextDef def) {
|
| 641 |
|
|
tag.addTag(def.getName()).addAttribute("id", def.getId()).addAttribute("label", def.getLabel());
|
| 642 |
35771
|
claudio.at
|
if ((def.getType() != null) && !def.getType().isEmpty()) {
|
| 643 |
26600
|
sandro.lab
|
tag.addAttribute("type", def.getType());
|
| 644 |
|
|
}
|
| 645 |
|
|
return tag;
|
| 646 |
|
|
}
|
| 647 |
|
|
|
| 648 |
|
|
private String asStringElement(final org.w3c.dom.Element element) throws TransformerException {
|
| 649 |
35771
|
claudio.at
|
final StringWriter buffer = new StringWriter();
|
| 650 |
26600
|
sandro.lab
|
transformer.transform(new DOMSource(element), new StreamResult(buffer));
|
| 651 |
|
|
return buffer.toString();
|
| 652 |
|
|
}
|
| 653 |
|
|
|
| 654 |
|
|
@SuppressWarnings("unchecked")
|
| 655 |
35179
|
michele.ar
|
private String getRelFundingTree(final String xmlTree) {
|
| 656 |
|
|
String funding = "<funding>";
|
| 657 |
|
|
try {
|
| 658 |
35771
|
claudio.at
|
final Document ftree = new SAXReader().read(new StringReader(xmlTree));
|
| 659 |
35179
|
michele.ar
|
funding = "<funding>";
|
| 660 |
|
|
// String _id = "";
|
| 661 |
26600
|
sandro.lab
|
|
| 662 |
37531
|
claudio.at
|
funding += getFunderElement(ftree);
|
| 663 |
|
|
|
| 664 |
35771
|
claudio.at
|
for (final Object o : Lists.reverse(ftree.selectNodes("//fundingtree//*[starts-with(local-name(),'funding_level_')]"))) {
|
| 665 |
|
|
final Element e = (Element) o;
|
| 666 |
|
|
final String _id = e.valueOf("./id");
|
| 667 |
37894
|
alessia.ba
|
funding += "<" + e.getName() + " name=\"" + escapeXml(e.valueOf("./name")) + "\">" + escapeXml(_id) + "</" + e.getName() + ">";
|
| 668 |
35179
|
michele.ar
|
// _id += "::";
|
| 669 |
26600
|
sandro.lab
|
}
|
| 670 |
35771
|
claudio.at
|
} catch (final DocumentException e) {
|
| 671 |
37531
|
claudio.at
|
throw new IllegalArgumentException("unable to parse funding tree: " + xmlTree + "\n" + e.getMessage());
|
| 672 |
35179
|
michele.ar
|
} finally {
|
| 673 |
|
|
funding += "</funding>";
|
| 674 |
26600
|
sandro.lab
|
}
|
| 675 |
35179
|
michele.ar
|
return funding;
|
| 676 |
26600
|
sandro.lab
|
}
|
| 677 |
|
|
|
| 678 |
37531
|
claudio.at
|
private String getFunderElement(final Document ftree) {
|
| 679 |
|
|
final String funderId = ftree.valueOf("//fundingtree/funder/id/text()");
|
| 680 |
|
|
final String funderShortName = ftree.valueOf("//fundingtree/funder/shortname/text()");
|
| 681 |
|
|
final String funderName = ftree.valueOf("//fundingtree/funder/name/text()");
|
| 682 |
|
|
final String funderJurisdiction = ftree.valueOf("//fundingtree/funder/jurisdiction/text()");
|
| 683 |
|
|
|
| 684 |
|
|
return "<funder id=\"" + escapeXml(funderId) + "\" shortname=\"" + escapeXml(funderShortName) + "\" name=\"" + escapeXml(funderName)
|
| 685 |
|
|
+ "\" jurisdiction=\"" + escapeXml(funderJurisdiction) + "\" />";
|
| 686 |
|
|
}
|
| 687 |
|
|
|
| 688 |
35179
|
michele.ar
|
private void fillContextMap(final String xmlTree) {
|
| 689 |
26600
|
sandro.lab
|
|
| 690 |
35179
|
michele.ar
|
Document fundingPath;
|
| 691 |
26600
|
sandro.lab
|
try {
|
| 692 |
35179
|
michele.ar
|
fundingPath = new SAXReader().read(new StringReader(xmlTree));
|
| 693 |
35771
|
claudio.at
|
} catch (final DocumentException e) {
|
| 694 |
26600
|
sandro.lab
|
throw new RuntimeException(e);
|
| 695 |
|
|
}
|
| 696 |
37273
|
claudio.at
|
try {
|
| 697 |
|
|
final Node funder = fundingPath.selectSingleNode("//funder");
|
| 698 |
41468
|
claudio.at
|
|
| 699 |
|
|
if (funder != null) {
|
| 700 |
|
|
|
| 701 |
|
|
final String funderShortName = funder.valueOf("./shortname");
|
| 702 |
|
|
contextes.add(funderShortName);
|
| 703 |
|
|
|
| 704 |
|
|
contextMapper.put(funderShortName, new ContextDef(funderShortName, funder.valueOf("./name"), "context", "funding"));
|
| 705 |
|
|
final Node level0 = fundingPath.selectSingleNode("//funding_level_0");
|
| 706 |
|
|
if (level0 != null) {
|
| 707 |
|
|
final String level0Id = Joiner.on("::").join(funderShortName, level0.valueOf("./name"));
|
| 708 |
|
|
contextMapper.put(level0Id, new ContextDef(level0Id, level0.valueOf("./description"), "category", ""));
|
| 709 |
|
|
final Node level1 = fundingPath.selectSingleNode("//funding_level_1");
|
| 710 |
|
|
if (level1 == null) {
|
| 711 |
|
|
contextes.add(level0Id);
|
| 712 |
|
|
} else {
|
| 713 |
|
|
final String level1Id = Joiner.on("::").join(level0Id, level1.valueOf("./name"));
|
| 714 |
|
|
contextMapper.put(level1Id, new ContextDef(level1Id, level1.valueOf("./description"), "concept", ""));
|
| 715 |
|
|
final Node level2 = fundingPath.selectSingleNode("//funding_level_2");
|
| 716 |
|
|
if (level2 == null) {
|
| 717 |
|
|
contextes.add(level1Id);
|
| 718 |
|
|
} else {
|
| 719 |
|
|
final String level2Id = Joiner.on("::").join(level1Id, level2.valueOf("./name"));
|
| 720 |
|
|
contextMapper.put(level2Id, new ContextDef(level2Id, level2.valueOf("./description"), "concept", ""));
|
| 721 |
|
|
contextes.add(level2Id);
|
| 722 |
|
|
}
|
| 723 |
|
|
}
|
| 724 |
37273
|
claudio.at
|
}
|
| 725 |
|
|
}
|
| 726 |
|
|
} catch (final NullPointerException e) {
|
| 727 |
|
|
throw new IllegalArgumentException("malformed funding path: " + xmlTree, e);
|
| 728 |
35179
|
michele.ar
|
}
|
| 729 |
26600
|
sandro.lab
|
}
|
| 730 |
|
|
|
| 731 |
28094
|
claudio.at
|
private String asXmlElement(final String name, final String value, final Qualifier q, final DataInfo dataInfo) {
|
| 732 |
26600
|
sandro.lab
|
StringBuilder sb = new StringBuilder();
|
| 733 |
|
|
sb.append("<");
|
| 734 |
|
|
sb.append(name);
|
| 735 |
|
|
if (q != null) {
|
| 736 |
|
|
sb.append(getAttributes(q));
|
| 737 |
|
|
}
|
| 738 |
28094
|
claudio.at
|
if (dataInfo != null) {
|
| 739 |
|
|
sb = dataInfoAsAttributes(sb, dataInfo);
|
| 740 |
|
|
}
|
| 741 |
35771
|
claudio.at
|
if ((value == null) || value.isEmpty()) {
|
| 742 |
26600
|
sandro.lab
|
sb.append("/>");
|
| 743 |
|
|
return sb.toString();
|
| 744 |
|
|
// return "<" + name + getAttributes(q) + "/>";
|
| 745 |
|
|
}
|
| 746 |
|
|
|
| 747 |
|
|
sb.append(">");
|
| 748 |
|
|
// sb.append(escapeXml(Normalizer.normalize(value, Normalizer.Form.NFD)));
|
| 749 |
|
|
sb.append(escapeXml(value));
|
| 750 |
|
|
sb.append("</");
|
| 751 |
|
|
sb.append(name);
|
| 752 |
|
|
sb.append(">");
|
| 753 |
|
|
|
| 754 |
|
|
return sb.toString();
|
| 755 |
|
|
// return "<" + name + getAttributes(q) + ">" + escapeXml(value) + "</" + name + ">";
|
| 756 |
|
|
}
|
| 757 |
|
|
|
| 758 |
|
|
private String getAttributes(final Qualifier q) {
|
| 759 |
35771
|
claudio.at
|
if (q == null) return "";
|
| 760 |
26600
|
sandro.lab
|
|
| 761 |
35771
|
claudio.at
|
final StringBuilder sb = new StringBuilder();
|
| 762 |
|
|
for (final Entry<FieldDescriptor, Object> e : q.getAllFields().entrySet()) {
|
| 763 |
26600
|
sandro.lab
|
// sb.append(" " + e.getKey().getName() + "=\"" + escapeXml(e.getValue().toString()) + "\"");
|
| 764 |
|
|
sb.append(" ");
|
| 765 |
|
|
sb.append(e.getKey().getName());
|
| 766 |
|
|
sb.append("=\"");
|
| 767 |
|
|
sb.append(escapeXml(e.getValue().toString()));
|
| 768 |
|
|
sb.append("\"");
|
| 769 |
|
|
}
|
| 770 |
|
|
return sb.toString();
|
| 771 |
|
|
}
|
| 772 |
|
|
|
| 773 |
|
|
|
| 774 |
46587
|
alessia.ba
|
private Map<FieldDescriptor, Object> filterFields(final GeneratedMessage fields, final Predicate<String> acceptFilter) {
|
| 775 |
|
|
if(acceptFilter == null) return fields.getAllFields();
|
| 776 |
|
|
final Map<FieldDescriptor, Object> res = Maps.newHashMap();
|
| 777 |
|
|
for(Entry<FieldDescriptor, Object> e : fields.getAllFields().entrySet()) {
|
| 778 |
|
|
if (acceptFilter.apply(e.getKey().getName())) {
|
| 779 |
|
|
res.put(e.getKey(), e.getValue());
|
| 780 |
|
|
}
|
| 781 |
26600
|
sandro.lab
|
}
|
| 782 |
46587
|
alessia.ba
|
return res;
|
| 783 |
26600
|
sandro.lab
|
}
|
| 784 |
|
|
|
| 785 |
46587
|
alessia.ba
|
|
| 786 |
|
|
|
| 787 |
30968
|
claudio.at
|
private List<String> countersAsXml() {
|
| 788 |
35771
|
claudio.at
|
final List<String> out = Lists.newArrayList();
|
| 789 |
|
|
for (final Entry<String, Integer> e : counters.entrySet()) {
|
| 790 |
30968
|
claudio.at
|
out.add(String.format("<counter_%s value=\"%s\"/>", e.getKey(), e.getValue()));
|
| 791 |
|
|
}
|
| 792 |
|
|
return out;
|
| 793 |
|
|
}
|
| 794 |
|
|
|
| 795 |
|
|
private void incrementCounter(final String type) {
|
| 796 |
|
|
if (!counters.containsKey(type)) {
|
| 797 |
|
|
counters.put(type, 1);
|
| 798 |
|
|
} else {
|
| 799 |
|
|
counters.put(type, counters.get(type) + 1);
|
| 800 |
|
|
}
|
| 801 |
|
|
}
|
| 802 |
|
|
|
| 803 |
26600
|
sandro.lab
|
@Override
|
| 804 |
|
|
public String toString() {
|
| 805 |
35771
|
claudio.at
|
final StringBuilder sb = new StringBuilder();
|
| 806 |
26600
|
sandro.lab
|
sb.append("################################################\n");
|
| 807 |
|
|
sb.append("ID: ").append(key).append("\n");
|
| 808 |
|
|
if (mainEntity != null) {
|
| 809 |
|
|
sb.append("MAIN ENTITY:\n").append(mainEntity.getEntity().toString() + "\n");
|
| 810 |
|
|
}
|
| 811 |
|
|
if (relations != null) {
|
| 812 |
|
|
sb.append("\nRELATIONS:\n");
|
| 813 |
35771
|
claudio.at
|
for (final OafDecoder decoder : relations) {
|
| 814 |
26600
|
sandro.lab
|
sb.append(decoder.getOafRel().toString() + "\n");
|
| 815 |
|
|
}
|
| 816 |
|
|
}
|
| 817 |
|
|
if (children != null) {
|
| 818 |
|
|
sb.append("\nCHILDREN:\n");
|
| 819 |
35771
|
claudio.at
|
for (final OafDecoder decoder : children) {
|
| 820 |
26600
|
sandro.lab
|
sb.append(decoder.getOafRel().toString() + "\n");
|
| 821 |
|
|
}
|
| 822 |
|
|
}
|
| 823 |
|
|
return sb.toString();
|
| 824 |
|
|
}
|
| 825 |
|
|
|
| 826 |
|
|
}
|