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package eu.dnetlib.data.collector.plugins;
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import java.io.BufferedReader;
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import java.io.File;
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import java.io.FileReader;
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import java.io.IOException;
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import java.net.MalformedURLException;
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import java.net.URL;
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import java.util.Iterator;
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import eu.dnetlib.rmi.data.CollectorServiceException;
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import eu.dnetlib.rmi.data.InterfaceDescriptor;
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import eu.dnetlib.rmi.data.plugin.AbstractCollectorPlugin;
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import org.apache.commons.lang3.StringEscapeUtils;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.dom4j.Document;
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import org.dom4j.DocumentHelper;
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import org.dom4j.Element;
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public class FileCSVCollectorPlugin extends AbstractCollectorPlugin {
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private static final Log log = LogFactory.getLog(FileCSVCollectorPlugin.class);
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private String[] headers = null;
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private int identifierNumber;
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@Override
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public Iterable<String> collect(final InterfaceDescriptor interfaceDescriptor, final String fromDate, final String untilDate)
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throws CollectorServiceException {
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final String header = interfaceDescriptor.getParams().get("header");
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final String separator = StringEscapeUtils.unescapeJava(interfaceDescriptor.getParams().get("separator"));
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identifierNumber = Integer.parseInt(interfaceDescriptor.getParams().get("identifier"));
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URL u = null;
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try {
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u = new URL(interfaceDescriptor.getBaseUrl());
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} catch (MalformedURLException e1) {
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throw new CollectorServiceException(e1);
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}
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final String baseUrl = u.getPath();
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log.info("base URL = " + baseUrl);
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try {
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final BufferedReader br = new BufferedReader(new FileReader(new File(baseUrl)));
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if (header != null && "true".equals(header.toLowerCase())) {
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headers = br.readLine().split(separator);
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}
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return new Iterable<String>() {
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@Override
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public Iterator<String> iterator() {
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return new FileCSVIterator(br, separator);
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}
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};
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} catch (Exception e) {
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throw new CollectorServiceException(e);
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}
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}
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class FileCSVIterator implements Iterator<String> {
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private String next;
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private BufferedReader reader;
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private String separator;
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public FileCSVIterator(final BufferedReader reader, final String separator) {
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this.reader = reader;
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this.separator = separator;
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next = calculateNext();
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}
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@Override
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public boolean hasNext() {
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return next != null;
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}
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@Override
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public String next() {
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String s = next;
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next = calculateNext();
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return s;
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}
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private String calculateNext() {
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try {
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Document document = DocumentHelper.createDocument();
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Element root = document.addElement("csvRecord");
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String newLine = reader.readLine();
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// FOR SOME FILES IT RETURN NULL ALSO IF THE FILE IS NOT READY DONE
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if (newLine == null) {
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newLine = reader.readLine();
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}
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if (newLine == null) {
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log.info("there is no line, closing RESULT SET");
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reader.close();
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return null;
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}
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String[] currentRow = newLine.split(separator);
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if (currentRow != null) {
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for (int i = 0; i < currentRow.length; i++) {
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String hAttribute = headers != null && i < headers.length ? headers[i] : "column" + i;
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Element row = root.addElement("column");
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if (i == identifierNumber) {
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row.addAttribute("isID", "true");
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}
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row.addAttribute("name", hAttribute).addText(currentRow[i]);
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}
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return document.asXML();
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}
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} catch (IOException e) {
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log.error("Error calculating next csv element", e);
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}
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return null;
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}
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@Override
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public void remove() {
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throw new UnsupportedOperationException();
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}
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}
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}
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