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package eu.dnetlib.administration.uis.modules.workflows;
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import java.util.ArrayList;
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import java.util.Collections;
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import java.util.List;
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import java.util.stream.Collectors;
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import org.apache.commons.lang3.StringUtils;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.springframework.beans.factory.annotation.Autowired;
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import org.springframework.stereotype.Component;
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import eu.dnetlib.administration.uis.modules.datasources.ProtocolParameter;
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import eu.dnetlib.administration.uis.modules.datasources.VocabularyEntry;
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import eu.dnetlib.clients.is.InformationServiceClient;
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import eu.dnetlib.exceptions.InformationServiceException;
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@Component
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public class WorkflowsUIUtils {
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private static final Log log = LogFactory.getLog(WorkflowsUIUtils.class);
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@Autowired
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private InformationServiceClient isClient;
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public List<VocabularyEntry> fetchVocabularyTerms(final String voc) throws InformationServiceException {
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final String xquery = "for $x in collection('/db/DRIVER/conf/vocabulary')[.//VOCABULARY_NAME/@code = '"
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+ voc.trim() + "']//TERM return concat($x/@code, ' @@@ ', $x/@english_name)";
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final List<VocabularyEntry> list = new ArrayList<>();
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for (final String s : isClient.find(xquery)) {
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final String[] arr = s.split("@@@");
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list.add(new VocabularyEntry(arr[0].trim(), arr[1].trim()));
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}
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Collections.sort(list);
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return list;
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}
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// @Cacheable("protocol_parameters")
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public List<ProtocolParameter> listParametersForProtocol(final String protocol) {
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final String query = "for $x in collection('/db/DRIVER/dnetService/msroWorker')//PLUGIN "
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+ "where lower-case($x/@protocol) = '" + protocol.toLowerCase() + "'"
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+ "return $x/PARAM/concat(@name, ' @-@ ', @type, ' @-@ ', @optional, ' @-@ ', @regex, ' @-@ ', @functionPopulated)";
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try {
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return isClient.find(query)
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.stream()
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.distinct()
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.map(s -> {
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final String[] arr = s.split("@-@");
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final ProtocolParameter p = new ProtocolParameter();
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p.setName(arr[0].trim());
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if (StringUtils.isNotBlank(arr[1].trim())) {
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p.setType(arr[1].trim());
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}
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if (StringUtils.isNotBlank(arr[2].trim())) {
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p.setOptional("true".equalsIgnoreCase(arr[2].trim()));
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}
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if (StringUtils.isNotBlank(arr[3].trim())) {
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p.setRegex(arr[3].trim());
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}
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if (StringUtils.isNotBlank(arr[4].trim())) {
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p.setFunctionPopulated("true".equalsIgnoreCase(arr[4].trim()));
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}
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return p;
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})
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.collect(Collectors.toList());
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} catch (final InformationServiceException e) {
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log.warn("Error finding parameters of protocol " + protocol);
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return new ArrayList<>();
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}
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}
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public List<String> sections() {
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final String xquery = "distinct-values(collection('/db/DRIVER/wf/simple')//WORKFLOW_NAME/@menuSection/string())";
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try {
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return isClient.find(xquery);
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} catch (final InformationServiceException e) {
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log.error("Error obtaining worflowSections", e);
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return new ArrayList<>();
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}
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}
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public List<WorkflowItem> listWorflowsForSection(final String name) {
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return listWorflowsByCondition("//WORKFLOW_NAME/@menuSection='" + name + "'");
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}
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public List<WorkflowItem> listWorflowsForDatasource(final String dsId) {
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return listWorflowsByCondition("//DATASOURCE/@id='" + dsId + "'");
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}
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public List<WorkflowItem> listWorflowsForApi(final String dsId, final String ifaceId) {
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return listWorflowsByCondition("//DATASOURCE[@id='" + dsId + "' and @interface='" + ifaceId + "']");
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}
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private List<WorkflowItem> listWorflowsByCondition(final String cond) {
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final String query =
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"for $x in collection('/db/DRIVER/wf/simple') where $x" + cond
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+ " order by $x//WORKFLOW_NAME return concat($x//RESOURCE_IDENTIFIER/@value, ' ==@== ', $x//WORKFLOW_NAME, ' ==@== ', $x//WORKFLOW_DESCRIPTION, ' ==@== ', $x//DESTROY_WORKFLOW_TEMPLATE/@id)";
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try {
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return isClient.find(query)
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.stream()
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.map(s -> {
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final String[] arr = s.split("==@==");
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return new WorkflowItem(arr[0].trim(), arr[1].trim(), arr[2].trim(), arr[3].trim().length() > 0);
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})
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.collect(Collectors.toList());
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} catch (final InformationServiceException e) {
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log.error("Error obtaining wfs using query: " + query, e);
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return new ArrayList<>();
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}
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}
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}
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